Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0801
         (724 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X77926-1|CAA54898.1|  218|Drosophila melanogaster BBC1 protein p...   157   2e-38
AE014134-1746|ABC65888.1|  218|Drosophila melanogaster CG4651-PB...   157   2e-38
AE014134-1745|AAF52842.1|  218|Drosophila melanogaster CG4651-PA...   157   2e-38

>X77926-1|CAA54898.1|  218|Drosophila melanogaster BBC1 protein
           protein.
          Length = 218

 Score =  157 bits (380), Expect = 2e-38
 Identities = 88/215 (40%), Positives = 111/215 (51%), Gaps = 1/215 (0%)
 Frame = +2

Query: 14  MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRC 193
           MGKGNNMIPN H+HK WQR VKTWFNQPAR+ RR  NR+              LRP+VRC
Sbjct: 1   MGKGNNMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRC 60

Query: 194 PTVRYHTKVRAGRGFTLREIRAQDXTQYXPERFGXL*IXXDAKXLLKSXXNPCFXXXXVX 373
           PT+RYHTK+RAGRGFTL E++         +  G           L+S            
Sbjct: 61  PTIRYHTKLRAGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYR 120

Query: 374 SACFXVXPKGKXXLKGGXXXXXXXLXTQLRGPLMPVQXPAPKSVADLSL-KMKRTSKLIN 550
           S         K    G        L TQL+GP++P++   P  V    + K ++  K   
Sbjct: 121 SKLILFPINEKKIRAGESSLEECKLATQLKGPVLPIKNEQPAVVEFREVTKDEKKFKAFA 180

Query: 551 TLRGARSIAKLVGIRAKRLXDAAENPDDVTKAPTR 655
           TLR AR+ A+LVGIRAKR  +AAE+ D     P +
Sbjct: 181 TLRKARTDARLVGIRAKRAKEAAESEDAAKGDPKK 215


>AE014134-1746|ABC65888.1|  218|Drosophila melanogaster CG4651-PB,
           isoform B protein.
          Length = 218

 Score =  157 bits (380), Expect = 2e-38
 Identities = 88/215 (40%), Positives = 111/215 (51%), Gaps = 1/215 (0%)
 Frame = +2

Query: 14  MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRC 193
           MGKGNNMIPN H+HK WQR VKTWFNQPAR+ RR  NR+              LRP+VRC
Sbjct: 1   MGKGNNMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRC 60

Query: 194 PTVRYHTKVRAGRGFTLREIRAQDXTQYXPERFGXL*IXXDAKXLLKSXXNPCFXXXXVX 373
           PT+RYHTK+RAGRGFTL E++         +  G           L+S            
Sbjct: 61  PTIRYHTKLRAGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYR 120

Query: 374 SACFXVXPKGKXXLKGGXXXXXXXLXTQLRGPLMPVQXPAPKSVADLSL-KMKRTSKLIN 550
           S         K    G        L TQL+GP++P++   P  V    + K ++  K   
Sbjct: 121 SKLILFPINEKKIRAGESSLEECKLATQLKGPVLPIKNEQPAVVEFREVTKDEKKFKAFA 180

Query: 551 TLRGARSIAKLVGIRAKRLXDAAENPDDVTKAPTR 655
           TLR AR+ A+LVGIRAKR  +AAE+ D     P +
Sbjct: 181 TLRKARTDARLVGIRAKRAKEAAESEDAAKGDPKK 215


>AE014134-1745|AAF52842.1|  218|Drosophila melanogaster CG4651-PA,
           isoform A protein.
          Length = 218

 Score =  157 bits (380), Expect = 2e-38
 Identities = 88/215 (40%), Positives = 111/215 (51%), Gaps = 1/215 (0%)
 Frame = +2

Query: 14  MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRYRRKQNRIXXXXXXXXXXXXXXLRPIVRC 193
           MGKGNNMIPN H+HK WQR VKTWFNQPAR+ RR  NR+              LRP+VRC
Sbjct: 1   MGKGNNMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRC 60

Query: 194 PTVRYHTKVRAGRGFTLREIRAQDXTQYXPERFGXL*IXXDAKXLLKSXXNPCFXXXXVX 373
           PT+RYHTK+RAGRGFTL E++         +  G           L+S            
Sbjct: 61  PTIRYHTKLRAGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYR 120

Query: 374 SACFXVXPKGKXXLKGGXXXXXXXLXTQLRGPLMPVQXPAPKSVADLSL-KMKRTSKLIN 550
           S         K    G        L TQL+GP++P++   P  V    + K ++  K   
Sbjct: 121 SKLILFPINEKKIRAGESSLEECKLATQLKGPVLPIKNEQPAVVEFREVTKDEKKFKAFA 180

Query: 551 TLRGARSIAKLVGIRAKRLXDAAENPDDVTKAPTR 655
           TLR AR+ A+LVGIRAKR  +AAE+ D     P +
Sbjct: 181 TLRKARTDARLVGIRAKRAKEAAESEDAAKGDPKK 215


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,252,810
Number of Sequences: 53049
Number of extensions: 388817
Number of successful extensions: 827
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)