Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0800
         (514 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5V205 Cluster: Ribonucleoside-triphosphate reductase; ...    36   0.41 
UniRef50_Q8I2R1 Cluster: Putative uncharacterized protein PFI121...    33   2.9  
UniRef50_UPI00015A4429 Cluster: UPI00015A4429 related cluster; n...    33   5.0  

>UniRef50_A5V205 Cluster: Ribonucleoside-triphosphate reductase;
           n=3; Chloroflexi (class)|Rep:
           Ribonucleoside-triphosphate reductase - Roseiflexus sp.
           RS-1
          Length = 768

 Score = 36.3 bits (80), Expect = 0.41
 Identities = 14/31 (45%), Positives = 23/31 (74%)
 Frame = -3

Query: 137 YSRHSRELGRRQTYLKTISKKIDSLVEILKD 45
           YSR + ELGRR+T+++T+ + +D L E+  D
Sbjct: 153 YSRFNYELGRRETWIETVDRAVDYLYELAGD 183


>UniRef50_Q8I2R1 Cluster: Putative uncharacterized protein PFI1210w;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFI1210w - Plasmodium falciparum
           (isolate 3D7)
          Length = 2082

 Score = 33.5 bits (73), Expect = 2.9
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = -3

Query: 500 YLTKKILTR*FSISLNSICTVNILYKIMYQGSFNEQTYSILLQY 369
           Y+  KI+   FS +++ +  +N+L+KI+Y  S N  T  I  +Y
Sbjct: 804 YMDNKIVEHTFSNNISYMEKINMLFKILYNHSLNISTCKIFFKY 847


>UniRef50_UPI00015A4429 Cluster: UPI00015A4429 related cluster; n=1;
           Danio rerio|Rep: UPI00015A4429 UniRef100 entry - Danio
           rerio
          Length = 1023

 Score = 32.7 bits (71), Expect = 5.0
 Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
 Frame = +1

Query: 322 NNRFCKIGHKSHP*SRYCNNML*VCSLKLPWYIILYNILTVQI-LFKLILNYLVSIFFVK 498
           N + C +G+ S     Y    +  CS+ L  YI+L++IL   I L+ +ILNY++  + V 
Sbjct: 249 NFKSCLLGYTSI----YAGLHILFCSINLS-YILLFSILLFSIILYYIILNYIILYYIVL 303

Query: 499 Y 501
           Y
Sbjct: 304 Y 304


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 445,352,938
Number of Sequences: 1657284
Number of extensions: 8034080
Number of successful extensions: 15798
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15794
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)