Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0800
         (514 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   4.6  
AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection...    23   8.0  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   8.0  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 393 DLQHIIAIPRLGMRFVSDFAKSIIAFS 313
           D ++ +  P +  +F+SDF+ +I  FS
Sbjct: 744 DFKNALFFPAVVRQFISDFSVTIAIFS 770


>AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection
           responsive shortpeptide protein.
          Length = 81

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -1

Query: 445 VLLIYCTKLCTKAVLMSRLTAYYCNTSTRDEICVRFCKIDY 323
           V ++    LCT AV  + + AY    +    I  R+C   Y
Sbjct: 4   VCILLAVLLCTAAVADAMVFAYAPTCARCKSIGARYCGYGY 44


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 114 RKKTDVFKNYFEE 76
           RK TD+FK  F+E
Sbjct: 452 RKHTDIFKKLFQE 464


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 484,400
Number of Sequences: 2352
Number of extensions: 8524
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)