Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0799
(718 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 24 1.7
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 24 1.7
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 24 1.7
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 3.8
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 3.8
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 3.8
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 21 8.8
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 21 8.8
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 21 8.8
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 21 8.8
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 21 8.8
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 21 8.8
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 538 RTAYVVGSLALKTYF*TYHYKIQNTNHQQFNSCK 639
R ++ SL+ KT +YK N+ N+CK
Sbjct: 77 REPKIISSLSNKTIHNNNNYKYNYNNNNYNNNCK 110
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 538 RTAYVVGSLALKTYF*TYHYKIQNTNHQQFNSCK 639
R ++ SL+ KT +YK N+ N+CK
Sbjct: 77 REPKIISSLSNKTIHNNNNYKYNYNNNNYNNNCK 110
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 538 RTAYVVGSLALKTYF*TYHYKIQNTNHQQFNSCK 639
R ++ SL+ KT +YK N+ N+CK
Sbjct: 77 REPKIISSLSNKTIHNNNNYKYNYNNNNYNNNCK 110
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.6 bits (46), Expect = 3.8
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +1
Query: 538 RTAYVVGSLALKTYF*TYHYKIQNTNHQQFNSCK 639
R ++ SL+ +T +YK N+ N+CK
Sbjct: 77 REPKIISSLSNRTIHNNNNYKYNYNNNNYNNNCK 110
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 106 PSVTILCSLLHQPDFQEIWIRSGF 35
P+V++ CS P Q W GF
Sbjct: 437 PAVSLKCSAAGNPTPQVTWALDGF 460
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 106 PSVTILCSLLHQPDFQEIWIRSGF 35
P+V++ CS P Q W GF
Sbjct: 437 PAVSLKCSAAGNPTPQVTWALDGF 460
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.8
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 40 HSESRFPENLVDVTDYIK 93
+SE+RF E +V+ YIK
Sbjct: 162 YSEARFEEIKKEVSSYIK 179
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.4 bits (43), Expect = 8.8
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -2
Query: 711 LVWVFPLRIAGSTASNLVAVHLLVF 637
++W+F + T SN+ V L +F
Sbjct: 78 VIWIFSTSKSLRTPSNMFIVSLAIF 102
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 21.4 bits (43), Expect = 8.8
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 40 HSESRFPENLVDVTDYIK 93
+SE+RF E +V+ YIK
Sbjct: 89 YSETRFEEIKKEVSSYIK 106
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 21.4 bits (43), Expect = 8.8
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 40 HSESRFPENLVDVTDYIK 93
+SE+RF E +V+ YIK
Sbjct: 105 YSETRFEEIKKEVSSYIK 122
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.8
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 40 HSESRFPENLVDVTDYIK 93
+SE+RF E +V+ YIK
Sbjct: 162 YSETRFEEIKKEVSSYIK 179
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 21.4 bits (43), Expect = 8.8
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -2
Query: 711 LVWVFPLRIAGSTASNLVAVHLLVF 637
++W+F + T SN+ V L +F
Sbjct: 78 VIWIFSTSKSLRTPSNMFIVSLAIF 102
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,471
Number of Sequences: 438
Number of extensions: 4191
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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