Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0798
         (661 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   1.7  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   3.9  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   3.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.0  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -2

Query: 627 KRRQYIID*LILIFIWNIHDINRFFFIRIKITK 529
           K R Y+I   + +F W I  ++ + F RI + K
Sbjct: 92  KLRHYLIFIFVNVFFWVIILMSNYAFTRIILLK 124


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/24 (29%), Positives = 18/24 (75%)
 Frame = +3

Query: 135 RPELMIGYS*F*REMLMEPLIVYY 206
           RP+L++ ++ F  + +++P+I +Y
Sbjct: 111 RPKLLLKHNLFLLDNIVKPIIAFY 134


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 309 LIRIPKCLLSFLVPY 265
           ++ IP C+  F+VPY
Sbjct: 127 ILIIPTCVAMFIVPY 141


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 36   RTFTSRPRAELPLVPESSLSWPDEG 110
            RT T+RP         ++ +WP +G
Sbjct: 1059 RTTTTRPTTTSTTTRPTTTNWPTQG 1083


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 85  LSGTSGNSARGRDVNVRVQIRSFRRA 8
           L+  S  S   RDVNVR  +  +  A
Sbjct: 102 LAKNSVGSVHSRDVNVRAVVNQYYEA 127


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 564 NRFFFIRIKITKLLVYFTTKSE 499
           NRF  + +++TKL     TK++
Sbjct: 550 NRFVTLNVQLTKLTKNCATKAQ 571


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,961
Number of Sequences: 336
Number of extensions: 2976
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)