Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0797
         (813 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   2.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.8  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 507 FFVP*SQSFWASVQSSIWKLLAWVWQFWLL 418
           FFVP    F   +Q  +    AW+W  WLL
Sbjct: 200 FFVPPPLMF---LQDFLSHQHAWIWLVWLL 226


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 507 FFVP*SQSFWASVQSSIWKLLAWVWQFWLL 418
           FFVP    F   +Q  +    AW+W  WLL
Sbjct: 433 FFVPPPLMF---LQDFLSHQHAWIWLVWLL 459


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 507 FFVP*SQSFWASVQSSIWKLLAWVWQFWLL 418
           FFVP    F   +Q  +    AW+W  WLL
Sbjct: 433 FFVPPPLMF---LQDFLSHQHAWIWLVWLL 459


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/28 (32%), Positives = 11/28 (39%)
 Frame = +2

Query: 407 GCGNSSQNCQTQASSFQIEDCTEAQKDW 490
           G G   + C T A  F   DC+     W
Sbjct: 498 GNGRCDEECNTYACEFDGNDCSLGINPW 525


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 15/69 (21%), Positives = 27/69 (39%)
 Frame = -1

Query: 615 GLRKCTELRIFRTLFPCSPFTTFL*ALSALVTGFTTFFVP*SQSFWASVQSSIWKLLAWV 436
           G   C  ++  +TL    P+ +    ++  +        P +   W S +S +   LAWV
Sbjct: 109 GFLLCKVVKYGQTL---GPYLSSYVLMATAIDRHQAICYPLTYCSWTSRRSKVMVYLAWV 165

Query: 435 WQFWLLLPQ 409
                 +PQ
Sbjct: 166 ASLAFCIPQ 174


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 444 AWVWQFWLL 418
           AW+W  WLL
Sbjct: 464 AWIWLLWLL 472


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 444 AWVWQFWLL 418
           AW+W  WLL
Sbjct: 464 AWIWLLWLL 472


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 444 AWVWQFWLL 418
           AW+W  WLL
Sbjct: 464 AWIWLLWLL 472


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 444 AWVWQFWLL 418
           AW+W  WLL
Sbjct: 464 AWIWLLWLL 472


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,015
Number of Sequences: 336
Number of extensions: 1957
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)