Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0797
         (813 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p pro...    92   7e-19
AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA ...    92   7e-19
DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosom...    91   1e-18
AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal pr...    86   6e-17

>BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p
           protein.
          Length = 269

 Score = 92.3 bits (219), Expect = 7e-19
 Identities = 39/56 (69%), Positives = 46/56 (82%)
 Frame = +2

Query: 542 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 709
           Q+K++KG  G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 138 QKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193



 Score = 32.3 bits (70), Expect = 0.81
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +1

Query: 721 KAAMKKIEDNNTLVLLFTQVQTSTIFKAAVK 813
           +AAMKKIEDNNTLV L          +AAV+
Sbjct: 197 EAAMKKIEDNNTLVFLTHLRANKNHVRAAVR 227


>AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA
           protein.
          Length = 277

 Score = 92.3 bits (219), Expect = 7e-19
 Identities = 39/56 (69%), Positives = 46/56 (82%)
 Frame = +2

Query: 542 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 709
           Q+K++KG  G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 146 QKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201



 Score = 32.3 bits (70), Expect = 0.81
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +1

Query: 721 KAAMKKIEDNNTLVLLFTQVQTSTIFKAAVK 813
           +AAMKKIEDNNTLV L          +AAV+
Sbjct: 205 EAAMKKIEDNNTLVFLTHLRANKNHVRAAVR 235


>DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosomal
           protein naturalvariant protein.
          Length = 277

 Score = 91.5 bits (217), Expect = 1e-18
 Identities = 39/56 (69%), Positives = 46/56 (82%)
 Frame = +2

Query: 542 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 709
           Q+K++KG  G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 146 QKKIIKGAFGTRARKIRANVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201



 Score = 32.7 bits (71), Expect = 0.61
 Identities = 17/31 (54%), Positives = 21/31 (67%)
 Frame = +1

Query: 721 KAAMKKIEDNNTLVLLFTQVQTSTIFKAAVK 813
           +AAMKKIEDNNTLV L       +  +AAV+
Sbjct: 205 EAAMKKIEDNNTLVFLTHLRANKSHVRAAVR 235


>AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal
           protein L23a protein.
          Length = 269

 Score = 85.8 bits (203), Expect = 6e-17
 Identities = 38/56 (67%), Positives = 45/56 (80%)
 Frame = +2

Query: 542 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 709
           Q+K++K   G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 139 QKKIIKA-FGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193



 Score = 32.3 bits (70), Expect = 0.81
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +1

Query: 721 KAAMKKIEDNNTLVLLFTQVQTSTIFKAAVK 813
           +AAMKKIEDNNTLV L          +AAV+
Sbjct: 197 EAAMKKIEDNNTLVFLTHLRANKNHVRAAVR 227


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,313,784
Number of Sequences: 53049
Number of extensions: 360984
Number of successful extensions: 1206
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)