Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0796
(983 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 125 2e-27
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 109 8e-23
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 101 3e-20
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 89 2e-16
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 87 5e-16
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 83 8e-15
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 81 6e-14
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 79 1e-13
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 74 6e-12
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 69 2e-10
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 67 6e-10
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 67 7e-10
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 62 2e-08
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 62 2e-08
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 62 3e-08
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 61 4e-08
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 61 4e-08
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 61 5e-08
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 61 5e-08
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 60 6e-08
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 60 6e-08
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 60 6e-08
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 60 9e-08
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 60 9e-08
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 60 9e-08
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 60 1e-07
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 60 1e-07
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 59 1e-07
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 59 1e-07
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 59 2e-07
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 59 2e-07
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 59 2e-07
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 59 2e-07
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 59 2e-07
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 59 2e-07
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 58 3e-07
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 58 3e-07
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 58 3e-07
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 58 5e-07
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 57 6e-07
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 57 6e-07
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 57 6e-07
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 57 8e-07
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 57 8e-07
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 57 8e-07
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 56 1e-06
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 56 1e-06
UniRef50_Q55CP6 Cluster: Putative uncharacterized protein; n=1; ... 56 1e-06
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 56 1e-06
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 56 1e-06
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 56 1e-06
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 56 1e-06
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 56 1e-06
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 56 2e-06
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 55 2e-06
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 55 2e-06
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 55 2e-06
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 55 2e-06
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 55 3e-06
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 55 3e-06
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 55 3e-06
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 54 4e-06
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 54 4e-06
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 54 4e-06
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 54 4e-06
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 54 4e-06
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 54 4e-06
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 54 4e-06
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 54 4e-06
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 54 6e-06
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 54 6e-06
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 54 6e-06
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 54 6e-06
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 54 6e-06
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 54 6e-06
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 54 6e-06
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 54 7e-06
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 54 7e-06
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 54 7e-06
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 54 7e-06
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 54 7e-06
UniRef50_UPI0000D55FA1 Cluster: PREDICTED: similar to CG3561-PA;... 53 1e-05
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 53 1e-05
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 53 1e-05
UniRef50_Q4N4Z2 Cluster: ATP-dependent RNA helicase, putative; n... 53 1e-05
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 53 1e-05
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 53 1e-05
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 53 1e-05
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 53 1e-05
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 53 1e-05
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 53 1e-05
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 53 1e-05
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 53 1e-05
UniRef50_Q5BXN2 Cluster: SJCHGC07723 protein; n=1; Schistosoma j... 53 1e-05
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 53 1e-05
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 53 1e-05
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 52 2e-05
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 52 2e-05
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 52 2e-05
UniRef50_A2E7Z7 Cluster: Helicase conserved C-terminal domain co... 52 2e-05
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 52 2e-05
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 52 2e-05
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 52 2e-05
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 52 2e-05
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 52 2e-05
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 52 3e-05
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 52 3e-05
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 52 3e-05
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 52 3e-05
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 52 3e-05
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 52 3e-05
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 52 3e-05
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 52 3e-05
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 52 3e-05
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 52 3e-05
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 52 3e-05
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 52 3e-05
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 52 3e-05
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 52 3e-05
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 52 3e-05
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 52 3e-05
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 51 4e-05
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 51 4e-05
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 51 4e-05
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 51 4e-05
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 51 4e-05
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 51 4e-05
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 51 4e-05
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 51 5e-05
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 51 5e-05
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 51 5e-05
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 51 5e-05
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 51 5e-05
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 51 5e-05
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 51 5e-05
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 51 5e-05
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 50 7e-05
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 50 7e-05
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 50 7e-05
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 50 7e-05
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 50 7e-05
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 50 7e-05
UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4; Mollic... 50 7e-05
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 50 7e-05
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 50 7e-05
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 50 7e-05
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 50 7e-05
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 50 7e-05
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 50 7e-05
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 50 7e-05
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 50 9e-05
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 50 9e-05
UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, wh... 50 9e-05
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 50 1e-04
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 50 1e-04
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 50 1e-04
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 50 1e-04
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 50 1e-04
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 50 1e-04
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 50 1e-04
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 50 1e-04
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 50 1e-04
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 50 1e-04
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 50 1e-04
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 50 1e-04
UniRef50_A7U5X2 Cluster: DEAD-box helicase 15; n=2; Plasmodium f... 50 1e-04
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 49 2e-04
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 49 2e-04
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 49 2e-04
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 49 2e-04
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 49 2e-04
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 49 2e-04
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 49 2e-04
UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL' ... 49 2e-04
UniRef50_A2E773 Cluster: Helicase conserved C-terminal domain co... 49 2e-04
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 49 2e-04
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 49 2e-04
UniRef50_Q9FVV4 Cluster: Putative DEAD-box ATP-dependent RNA hel... 49 2e-04
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 49 2e-04
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 49 2e-04
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 49 2e-04
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 49 2e-04
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 49 2e-04
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 49 2e-04
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 49 2e-04
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 48 3e-04
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 48 3e-04
UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1; Ureapl... 48 3e-04
UniRef50_Q6YQC2 Cluster: Superfamily II DNA and RNA helicase; n=... 48 3e-04
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 48 3e-04
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 48 3e-04
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 48 3e-04
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 48 3e-04
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 48 3e-04
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 48 3e-04
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 48 3e-04
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 48 3e-04
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 48 3e-04
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 48 3e-04
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 48 3e-04
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 48 4e-04
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 48 4e-04
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 48 4e-04
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 48 4e-04
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=... 48 4e-04
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 48 4e-04
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 48 4e-04
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 48 4e-04
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 48 5e-04
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 48 5e-04
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 48 5e-04
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 48 5e-04
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 48 5e-04
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 48 5e-04
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 48 5e-04
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 48 5e-04
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 48 5e-04
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 48 5e-04
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 48 5e-04
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 48 5e-04
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 48 5e-04
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 48 5e-04
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 48 5e-04
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 48 5e-04
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 48 5e-04
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 48 5e-04
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 47 6e-04
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 47 6e-04
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 47 6e-04
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 47 6e-04
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 47 6e-04
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 47 6e-04
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 47 6e-04
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 47 6e-04
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 47 6e-04
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 47 6e-04
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 47 6e-04
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 47 6e-04
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 47 6e-04
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 47 6e-04
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 47 6e-04
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 47 6e-04
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 47 6e-04
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 47 6e-04
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 47 6e-04
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 47 6e-04
UniRef50_Q9FLB0 Cluster: DEAD-box ATP-dependent RNA helicase 18;... 47 6e-04
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 47 6e-04
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 47 6e-04
UniRef50_UPI0000E49D13 Cluster: PREDICTED: similar to DEAD (Asp-... 47 9e-04
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 47 9e-04
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 47 9e-04
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 47 9e-04
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 47 9e-04
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 47 9e-04
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 47 9e-04
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 47 9e-04
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 47 9e-04
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 47 9e-04
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 47 9e-04
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 47 9e-04
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 47 9e-04
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 47 9e-04
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 47 9e-04
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 46 0.001
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 46 0.001
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 46 0.001
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q4U8S0 Cluster: DEAD-box family helicase, putative; n=2... 46 0.001
UniRef50_A7AU89 Cluster: DEAD/DEAH box helicase family protein; ... 46 0.001
UniRef50_A5K917 Cluster: DEAD/DEAH box helicase, putative; n=4; ... 46 0.001
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 46 0.001
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 46 0.001
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 46 0.001
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 46 0.001
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 46 0.001
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 46 0.001
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 46 0.001
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 46 0.001
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 46 0.001
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 46 0.001
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 46 0.001
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 46 0.001
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 46 0.001
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 46 0.001
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 46 0.001
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 46 0.001
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 46 0.001
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 46 0.001
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 46 0.001
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 46 0.001
UniRef50_Q5KCY8 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 46 0.001
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 46 0.001
UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;... 46 0.001
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 46 0.001
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 46 0.001
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 46 0.001
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 46 0.001
UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 46 0.001
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 46 0.002
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 46 0.002
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 46 0.002
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 46 0.002
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 46 0.002
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 46 0.002
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 46 0.002
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 46 0.002
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 46 0.002
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 46 0.002
UniRef50_Q4Q552 Cluster: ATP-dependent RNA helicase, putative; n... 46 0.002
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 46 0.002
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 46 0.002
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 46 0.002
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 46 0.002
UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1; ... 46 0.002
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 46 0.002
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 45 0.003
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 45 0.003
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 45 0.003
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 45 0.003
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 45 0.003
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 45 0.003
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 45 0.003
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 45 0.003
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 45 0.003
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 45 0.003
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 45 0.003
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 45 0.003
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 45 0.003
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 45 0.003
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 45 0.003
UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 45 0.003
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 45 0.003
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 45 0.003
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 45 0.003
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 45 0.003
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 45 0.003
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 45 0.003
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 45 0.003
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 45 0.003
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 45 0.003
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 45 0.003
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 45 0.003
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 45 0.003
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 44 0.005
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 44 0.005
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 44 0.005
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 44 0.005
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 44 0.005
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 44 0.005
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 44 0.005
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 44 0.005
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 44 0.005
UniRef50_Q9FQ91 Cluster: Putative chloroplast RNA helicase VDL' ... 44 0.005
UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole geno... 44 0.005
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 44 0.005
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 44 0.005
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 44 0.005
UniRef50_A2FYU9 Cluster: DEAD/DEAH box helicase family protein; ... 44 0.005
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 44 0.005
UniRef50_Q2GWX0 Cluster: Putative uncharacterized protein; n=4; ... 44 0.005
UniRef50_P52271 Cluster: Probable ATP-dependent RNA helicase MG3... 44 0.005
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 44 0.005
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 44 0.005
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 44 0.006
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 44 0.006
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 44 0.006
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 44 0.006
UniRef50_Q4SDX4 Cluster: Chromosome undetermined SCAF14628, whol... 44 0.006
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 44 0.006
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 44 0.006
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 44 0.006
UniRef50_A7QKJ8 Cluster: Chromosome chr2 scaffold_112, whole gen... 44 0.006
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 44 0.006
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 44 0.006
UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1; ... 44 0.006
UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n... 44 0.006
UniRef50_Q9C8S9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 44 0.006
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 44 0.006
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 44 0.006
UniRef50_O13622 Cluster: ATP-dependent RNA helicase mss116, mito... 44 0.006
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 44 0.006
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 44 0.006
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 44 0.008
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 44 0.008
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 44 0.008
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 44 0.008
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 44 0.008
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 44 0.008
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 44 0.008
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 44 0.008
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 44 0.008
UniRef50_A2DEZ7 Cluster: DEAD/DEAH box helicase family protein; ... 44 0.008
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 44 0.008
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 44 0.008
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 44 0.008
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 44 0.008
UniRef50_Q8A8L3 Cluster: ATP-independent RNA helicase; n=7; Bact... 43 0.010
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 43 0.010
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 43 0.010
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 43 0.010
UniRef50_A2YDM1 Cluster: Putative uncharacterized protein; n=2; ... 43 0.010
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 43 0.010
UniRef50_Q7R3I2 Cluster: GLP_158_41121_38797; n=1; Giardia lambl... 43 0.010
UniRef50_Q7QV50 Cluster: GLP_435_34658_36088; n=1; Giardia lambl... 43 0.010
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 43 0.010
UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1; ... 43 0.010
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 43 0.010
UniRef50_Q4P9E5 Cluster: ATP-dependent rRNA helicase SPB4; n=2; ... 43 0.010
UniRef50_A5E2I8 Cluster: ATP-dependent rRNA helicase SPB4; n=3; ... 43 0.010
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 43 0.010
UniRef50_Q6BZR4 Cluster: ATP-dependent RNA helicase DBP9; n=1; Y... 43 0.010
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 43 0.010
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 43 0.014
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 43 0.014
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 43 0.014
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 43 0.014
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 43 0.014
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 43 0.014
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 43 0.014
UniRef50_Q3LW03 Cluster: UB2 probably involved in pre-mRNA splic... 43 0.014
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 43 0.014
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 43 0.014
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 43 0.014
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 43 0.014
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 43 0.014
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 43 0.014
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 43 0.014
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 43 0.014
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 43 0.014
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 43 0.014
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 43 0.014
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 43 0.014
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 43 0.014
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 43 0.014
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 42 0.018
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 42 0.018
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 42 0.018
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 42 0.018
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 42 0.018
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 42 0.018
UniRef50_Q5CWY8 Cluster: Rok1p, eIF4A-1-family RNA SFII helicase... 42 0.018
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 42 0.018
UniRef50_A7ARY5 Cluster: DEAD/DEAH box helicase protein family; ... 42 0.018
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 42 0.018
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 42 0.018
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 42 0.018
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 42 0.018
UniRef50_Q92499 Cluster: ATP-dependent RNA helicase DDX1; n=56; ... 42 0.018
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 42 0.018
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 42 0.018
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 42 0.018
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 42 0.018
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 42 0.024
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 42 0.024
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.024
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 42 0.024
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 42 0.024
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 42 0.024
UniRef50_Q38DS7 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 42 0.024
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 42 0.024
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 42 0.024
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 42 0.024
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 42 0.024
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 42 0.032
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 42 0.032
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 42 0.032
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 42 0.032
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 42 0.032
UniRef50_Q01BD2 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 42 0.032
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 42 0.032
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 42 0.032
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 42 0.032
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 42 0.032
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 42 0.032
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 42 0.032
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 42 0.032
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 42 0.032
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 42 0.032
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 42 0.032
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 42 0.032
UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family pr... 41 0.042
UniRef50_Q97PV7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 41 0.042
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 41 0.042
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 41 0.042
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 41 0.042
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 41 0.042
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 41 0.042
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 41 0.042
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 41 0.042
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 41 0.042
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 41 0.042
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 41 0.042
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 41 0.042
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 41 0.042
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 41 0.042
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 41 0.042
UniRef50_Q8X0H1 Cluster: Related to RNA helicase MSS116; n=2; Ne... 41 0.042
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 41 0.042
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 125 bits (302), Expect = 2e-27
Identities = 56/89 (62%), Positives = 73/89 (82%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 435
LA PPQN+IAQSQSGTGKTAAFVLAMLSRV++ + +PQ LCL+PTYELA+QTG V +M
Sbjct: 132 LAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMG 191
Query: 436 KFCPEIKLKYAVRGEELPRGSKITVTFLL 522
KFC ++++ YA+RG +PRG+ IT ++
Sbjct: 192 KFCVDVQVMYAIRGNRIPRGTDITKQIII 220
Score = 107 bits (256), Expect = 6e-22
Identities = 54/127 (42%), Positives = 74/127 (58%)
Frame = +3
Query: 480 RTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIH 659
R +G I+IGTPG + DW K + D+ KI+VFVLDEADVMI+ QG D IRI
Sbjct: 207 RIPRGTDITKQIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQ 266
Query: 660 KCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL*SAFERRRITGIT*NHIM*SAKVQKTNF 839
+ LPS CQM+ FSAT+ +V FAE I+ +P + +T + +K +
Sbjct: 267 RALPSECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKY 326
Query: 840 RAICNIY 860
+A+CNIY
Sbjct: 327 QALCNIY 333
Score = 96.3 bits (229), Expect = 1e-18
Identities = 47/73 (64%), Positives = 55/73 (75%)
Frame = +2
Query: 32 ELVDPPGCRLLMKIIRQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMG 211
++VD LL K+I Q LVES +E+ +KDP+SPLYSVKTFE L LK LLKG+YAMG
Sbjct: 57 DVVDLAANSLLNKLIHQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIYAMG 116
Query: 212 FNAPSKIQETALP 250
FN PSKIQE ALP
Sbjct: 117 FNRPSKIQEMALP 129
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 109 bits (263), Expect = 8e-23
Identities = 49/89 (55%), Positives = 66/89 (74%)
Frame = +1
Query: 238 NSTSYTLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGE 417
N+ +A P QN+IAQSQSGTGKTAAF LAML V+ +PQ LC++PTYELA+Q G+
Sbjct: 67 NALPLMMAQPAQNLIAQSQSGTGKTAAFCLAMLGIVNPADKWPQCLCIAPTYELALQIGQ 126
Query: 418 VAAKMAKFCPEIKLKYAVRGEELPRGSKI 504
V +M +FC +++L YAVRG + RG+K+
Sbjct: 127 VLEQMGRFCADVRLVYAVRGNRIVRGTKV 155
Score = 91.1 bits (216), Expect = 4e-17
Identities = 42/64 (65%), Positives = 50/64 (78%)
Frame = +2
Query: 59 LLMKIIRQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQE 238
LL K+IR LV S +E+ ++DP+SPLYSVK+FE L LKP LLKGVY MGFN PS+IQE
Sbjct: 7 LLNKLIRHSLVHSSNQVEVLQRDPSSPLYSVKSFEELRLKPELLKGVYQMGFNRPSRIQE 66
Query: 239 TALP 250
ALP
Sbjct: 67 NALP 70
Score = 90.2 bits (214), Expect = 7e-17
Identities = 60/152 (39%), Positives = 81/152 (53%), Gaps = 25/152 (16%)
Frame = +3
Query: 480 RTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIH 659
R +G K I++GTPG ++DW K + D KI +FVLDEADVMI+ QGH+DQ IRI
Sbjct: 148 RIVRGTKVQEQIVVGTPGTVYDWCAKQKVLDPKKITMFVLDEADVMISMQGHRDQSIRIQ 207
Query: 660 -----------------------KCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL*SAFE 770
+ LP CQM+FFSAT+ +V +FAE I+ P +
Sbjct: 208 RWVLLALLLWGSSVGPPPPPPPLRLLPKGCQMLFFSATFEDSVWEFAERIIPEPNYIRLK 267
Query: 771 RRRIT--GIT*NHIM*SAKVQKTNFRAICNIY 860
R T I +IM +K +K F A+CN+Y
Sbjct: 268 REEETLDNIRQFYIMCGSKEEK--FSALCNLY 297
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 101 bits (242), Expect = 3e-20
Identities = 49/86 (56%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 435
L +PP N+IAQ+QSGTGKTAAFVL ML R+D N PQ +CL+PT ELA Q GEV KM
Sbjct: 653 LMEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMG 712
Query: 436 KFCPEIKLKYAVRGEELP--RGSKIT 507
KF +K+ YA++G + RG K+T
Sbjct: 713 KFIDNLKIHYAIKGGNMAAMRGRKLT 738
Score = 66.1 bits (154), Expect = 1e-09
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +2
Query: 44 PPGCRLLMKIIRQGLVESK-LDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNA 220
P LL K I++ + K + +++QR+DP SPLYS+ +F L LKP +LK + M F
Sbjct: 581 PADIALLNKFIQKEVKMMKDVVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQF 640
Query: 221 PSKIQETALP 250
P++IQETALP
Sbjct: 641 PTRIQETALP 650
Score = 64.5 bits (150), Expect = 4e-09
Identities = 43/127 (33%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
Frame = +3
Query: 489 QGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 668
+G K I+IGTPG D+ K+ D KI+ VLDEADVMI QG D I+ +
Sbjct: 733 RGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMV 792
Query: 669 ---PSTCQMMFFSATYGTAVMQFAEIIVSNPL*SAFERRRITGIT*NHIM*SAKVQKTNF 839
+ Q M FSATY V+ FA I+ N + +R + + +
Sbjct: 793 EDASDSVQSMLFSATYDEPVINFATKIIKNAIVVMLKREEQALPNIKQFYVQCACRDSKY 852
Query: 840 RAICNIY 860
AI N+Y
Sbjct: 853 AAIVNLY 859
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 89.0 bits (211), Expect = 2e-16
Identities = 41/57 (71%), Positives = 47/57 (82%)
Frame = +2
Query: 80 QGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALP 250
+GL E + ++IQ+ DPNSPLYSVKTFE L LKP LLKGVYAMG+N PSKIQE ALP
Sbjct: 46 EGLDEFGIQLDIQQSDPNSPLYSVKTFEELGLKPELLKGVYAMGYNKPSKIQEAALP 102
Score = 79.8 bits (188), Expect = 1e-13
Identities = 41/75 (54%), Positives = 53/75 (70%)
Frame = +1
Query: 268 PQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCP 447
P N+IAQSQSGTGKTAAF L ML+ VD + N PQ +C+SPT ELA+QT EV +K+ +F
Sbjct: 108 PNNLIAQSQSGTGKTAAFTLGMLNCVDPSINAPQAICISPTKELALQTFEVISKIGQF-S 166
Query: 448 EIKLKYAVRGEELPR 492
IK + E+P+
Sbjct: 167 NIKPLLYISEIEVPK 181
Score = 53.6 bits (123), Expect = 7e-06
Identities = 27/82 (32%), Positives = 48/82 (58%)
Frame = +3
Query: 507 SHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQM 686
+ ++IGTPGK+ + +K + +K+ VLDEAD ++ + +Q I++ LPS ++
Sbjct: 185 NQVIIGTPGKILENVIK-KQLSVKFLKMVVLDEADFIVKMKNVPNQIAMINRLLPSNVKV 243
Query: 687 MFFSATYGTAVMQFAEIIVSNP 752
FSAT+ V + + IV +P
Sbjct: 244 CLFSATFSMGVEELIKKIVQDP 265
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 87.4 bits (207), Expect = 5e-16
Identities = 42/76 (55%), Positives = 56/76 (73%)
Frame = +1
Query: 247 SYTLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAA 426
S ++D PQNMIAQSQSGTGKTA F+LAMLSR+ ++ +Y Q LC++PT ELA+Q V
Sbjct: 108 SSLISDNPQNMIAQSQSGTGKTATFLLAMLSRIRTDVHYCQCLCMAPTRELALQIESVGR 167
Query: 427 KMAKFCPEIKLKYAVR 474
+MA+F ++ AVR
Sbjct: 168 QMAQFMTDVSFATAVR 183
Score = 65.7 bits (153), Expect = 2e-09
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Frame = +2
Query: 68 KIIRQGLVESK-LDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETA 244
K++ L E+ LD E+ R DP+ PL+SV+TF+ L+LK LLKG+ AMGF PS IQE A
Sbjct: 47 KLLNSKLFETHDLDFEVLRSDPDHPLHSVRTFQELNLKEPLLKGIAAMGFYKPSTIQERA 106
Query: 245 L 247
L
Sbjct: 107 L 107
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 83.4 bits (197), Expect = 8e-15
Identities = 39/74 (52%), Positives = 53/74 (71%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 435
L + P+N+IAQSQSGTGKTA F+L MLS++D N + Q LC++PT EL Q EVA M+
Sbjct: 83 LENQPKNLIAQSQSGTGKTATFLLTMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMS 142
Query: 436 KFCPEIKLKYAVRG 477
KF +K+ A++G
Sbjct: 143 KFMNNVKITCAIKG 156
Score = 64.9 bits (151), Expect = 3e-09
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Frame = +3
Query: 450 NKVKV-CS*RGRTSQGFKN--HSHILIGTPGKMFDWGVKFGM--FDMGKIKVFVLDEADV 614
N VK+ C+ +G + + +S I+IGTPG + W F+ K+KVFVLDEAD+
Sbjct: 146 NNVKITCAIKGLSPDILEGQINSQIIIGTPGTLKFWTTDNSSLYFNPKKLKVFVLDEADI 205
Query: 615 MINRQGHQDQCIRIHKCLPSTCQMMFFSATYGTAVMQFAEIIVSNP 752
+I + RI + + CQ++ FSATY VM FA V P
Sbjct: 206 LIETPEFLNIAKRIKSKVTNNCQILLFSATYDERVMDFAHDFVPQP 251
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = +2
Query: 74 IRQGLVESKLDIEIQRKDPNS-PLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALP 250
+R+ LVE+ I + K N+ PLYSVK+FE L LK LL G+ +MGF PS IQE ALP
Sbjct: 22 LRKTLVETD-PINVTIKQSNADPLYSVKSFEDLQLKSELLNGISSMGFRKPSSIQERALP 80
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 80.6 bits (190), Expect = 6e-14
Identities = 37/82 (45%), Positives = 58/82 (70%)
Frame = +3
Query: 504 HSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQ 683
++ +++GTPG + D ++ + + KIK+FVLDEAD M+++QG DQCIR+ + LP Q
Sbjct: 208 NAQVIVGTPGTVLDL-MRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDTQ 266
Query: 684 MMFFSATYGTAVMQFAEIIVSN 749
++ FSAT+ AV Q+A+ IV N
Sbjct: 267 LVLFSATFADAVRQYAKKIVPN 288
Score = 79.4 bits (187), Expect = 1e-13
Identities = 39/62 (62%), Positives = 47/62 (75%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 435
L +PP+NMIAQSQSGTGKTAAF L ML+RV+ PQ +CL+P+ ELA QT EV +M
Sbjct: 127 LHNPPRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMG 186
Query: 436 KF 441
KF
Sbjct: 187 KF 188
Score = 69.7 bits (163), Expect = 1e-10
Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Frame = +2
Query: 86 LVESKLDIEIQ----RKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPT 253
L+ S+ +++++ + DPNSPLYS K+F+ L L P LLKG+YAM F PSKIQE ALP
Sbjct: 66 LISSEYEVKVKLADIQADPNSPLYSAKSFDELGLAPELLKGIYAMKFQKPSKIQERALP- 124
Query: 254 P*LILHRI**PSHNQVQE 307
L+LH P N + +
Sbjct: 125 --LLLHN---PPRNMIAQ 137
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 79.4 bits (187), Expect = 1e-13
Identities = 40/75 (53%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNK-NYPQVLCLSPTYELAIQTGEVAAKM 432
L++PP+NMIAQSQSGTGKT AFV+ +LSRVD N+ N PQ L L+P+ ELA Q V +
Sbjct: 131 LSNPPRNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSI 190
Query: 433 AKFCPEIKLKYAVRG 477
+FC + + A+ G
Sbjct: 191 GQFCTGLVVDAAIPG 205
Score = 70.9 bits (166), Expect = 5e-11
Identities = 34/118 (28%), Positives = 64/118 (54%)
Frame = +3
Query: 507 SHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQM 686
+++++GTPG + D ++ FD+ ++K+ V+DEAD M+++QG +QC+R+ LP T Q
Sbjct: 215 ANVVVGTPGTVMDL-IRRRQFDVSQLKLLVVDEADNMLDQQGLGEQCVRVKNMLPKTIQT 273
Query: 687 MFFSATYGTAVMQFAEIIVSNPL*SAFERRRITGIT*NHIM*SAKVQKTNFRAICNIY 860
+ FSAT+ V +AE ++ +T + + K + +C +Y
Sbjct: 274 LLFSATFPDHVKSYAEKFAPQANQMKLRQQELTVKGISQMYMDCPSLKEKYEVLCKLY 331
Score = 54.8 bits (126), Expect = 3e-06
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +2
Query: 83 GLVESKLDIEIQRKDPN--SPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALP 250
GL ES D+E+Q DP+ SPL S+ +F L L ++ G+ AM F PSKIQ ALP
Sbjct: 71 GLQESNYDVEVQLGDPDTDSPLSSISSFSELGLPQGIIDGLLAMNFKKPSKIQARALP 128
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 73.7 bits (173), Expect = 6e-12
Identities = 35/62 (56%), Positives = 46/62 (74%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 435
L++PP+N+I QSQSGTGKTAAF L MLSRVD PQ +C++P+ ELA Q EV ++
Sbjct: 183 LSNPPRNLIGQSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIG 242
Query: 436 KF 441
+F
Sbjct: 243 QF 244
Score = 64.5 bits (150), Expect = 4e-09
Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 4/61 (6%)
Frame = +2
Query: 80 QGLVESKLDIEIQ----RKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETAL 247
+GL+ + +E++ + DPNSPLYSV++F+ L+L +L+KG+ A GF PSKIQE AL
Sbjct: 120 EGLITNTFQVEVKLADLQGDPNSPLYSVQSFKELNLHEDLMKGIIAAGFQKPSKIQEKAL 179
Query: 248 P 250
P
Sbjct: 180 P 180
Score = 62.1 bits (144), Expect = 2e-08
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +3
Query: 477 GRTSQGFKNHSHILIGTPGKMFDWGVKFG-MFDMGKIKVFVLDEADVMINRQGHQDQCIR 653
G S+ + ILIGTPG + D ++ + D I+V VLDEAD +I +QG +Q R
Sbjct: 255 GSWSRNSRIDKQILIGTPGTLVDMLMRGSRILDPRMIRVLVLDEADELIAQQGLGEQTFR 314
Query: 654 IHKCLPSTCQMMFFSATYGTAVMQFAE 734
I + LP Q + FSAT+ V +FA+
Sbjct: 315 IKQLLPPNVQNVLFSATFNDDVQEFAD 341
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 68.9 bits (161), Expect = 2e-10
Identities = 33/62 (53%), Positives = 41/62 (66%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 435
+ P +++IAQ+ +G+GKT FVL MLSRVD PQ LC+ PT ELA Q EV KM
Sbjct: 127 MTPPHKHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMG 186
Query: 436 KF 441
KF
Sbjct: 187 KF 188
Score = 54.0 bits (124), Expect = 6e-06
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Frame = +3
Query: 486 SQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKC 665
++G +H++IGTPG + W + F + +K+ V DEAD M+ G +D ++I K
Sbjct: 208 TRGAPVSAHVVIGTPGTLKKW-MAFKRLGLNHLKILVFDEADHMLATDGFRDDSLKIMKD 266
Query: 666 L---PSTCQMMFFSATYGTAVMQFAEIIVSNP 752
+ Q++ FSAT+ V F V +P
Sbjct: 267 IGRVNPNFQVLLFSATFNETVKDFVARTVKDP 298
Score = 40.7 bits (91), Expect = 0.056
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 131 NSPLYSVKTFEALHLKPNLLKGVYA-MGFNAPSKIQETALP 250
++P S FE L+L P L+KG+Y M F PSKIQ +LP
Sbjct: 84 DTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLP 124
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 67.3 bits (157), Expect = 6e-10
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 435
+ + P N+IAQ+ +G+GKTA F LAML +VD+ +PQ +CL PT ELA Q +V ++
Sbjct: 146 ILNSPMNLIAQAHNGSGKTATFALAMLGKVDTRIIHPQCMCLCPTRELARQNQDVVNELG 205
Query: 436 KFCPEIKLKYAVRGEELPR--GSKITV 510
KF +G++ + GS+I +
Sbjct: 206 KFTGITTWLVVAQGDKYDKTIGSQIII 232
Score = 62.1 bits (144), Expect = 2e-08
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = +2
Query: 89 VESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALP 250
V++ I +Q DP + LYS K + L+L P+LLKG+Y GFN PSKIQ ALP
Sbjct: 91 VQNNSSISVQTVDPKAQLYSAKDWSDLNLSPDLLKGIYNKGFNRPSKIQAAALP 144
Score = 53.2 bits (122), Expect = 1e-05
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +3
Query: 507 SHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQ-DQCIRIHKCLPSTCQ 683
S I+I TPGKM D+ +K F +K+ V+DEAD MI+ + Q +I K Q
Sbjct: 228 SQIIICTPGKMQDF-LKKRSFPTEFMKLMVIDEADEMIDHRNMMASQVGQIRKFFRQNLQ 286
Query: 684 MMFFSATYGTAVMQFAEIIVSN 749
++ FSATY V FAE IV N
Sbjct: 287 ILLFSATYHEEVRLFAEKIVPN 308
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 66.9 bits (156), Expect = 7e-10
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 435
L P +++IAQ+ +G+GKT FVL MLSRVD N+ Q +C+ PT ELA Q V +M
Sbjct: 136 LTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMG 195
Query: 436 KF 441
KF
Sbjct: 196 KF 197
Score = 44.0 bits (99), Expect = 0.006
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST---CQ 683
++IGT G + W + IK+ V DEAD M+ G + RI + + + CQ
Sbjct: 226 VVIGTSGTLMKW-INHKKILTNDIKILVFDEADHMLAEDGFRSDSERIMRDIQRSAGGCQ 284
Query: 684 MMFFSATYGTAVMQFAEIIVSN 749
++ FSAT+ V F ++ +
Sbjct: 285 VLLFSATFNERVKDFVTRVIKD 306
Score = 41.1 bits (92), Expect = 0.042
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +2
Query: 86 LVESKLDIEIQRKDPNSPLY-SVKTFEALHLKPNLLKGVY-AMGFNAPSKIQETALP 250
L++ + +IQ +Y S FE L L P LLKG++ MGF+ PSKIQ LP
Sbjct: 77 LLDDSDESQIQAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMGFSRPSKIQAVTLP 133
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 62.5 bits (145), Expect = 2e-08
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 438
+++I Q+Q+GTGKTAAFVL +L +++ N N PQ+L L+PT ELAIQ E A+
Sbjct: 50 KDIIGQAQTGTGKTAAFVLPLLDKINLNINAPQLLILAPTRELAIQVSEAVQTYAR 105
Score = 47.6 bits (108), Expect = 5e-04
Identities = 27/85 (31%), Positives = 45/85 (52%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K H ++GTPG++ D ++ + +K FVLDEAD M+ + G D I + +P
Sbjct: 129 KRGVHAIVGTPGRVMD-HIEKKTLKLDNLKSFVLDEADEML-KMGFIDDIKWIMQRIPEQ 186
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNP 752
Q+ FSAT + + A+ ++ P
Sbjct: 187 RQIALFSATMPNVIKKIAKQFLNQP 211
>UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase -
Plasmodium falciparum
Length = 576
Score = 62.5 bits (145), Expect = 2e-08
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMIN-RQGHQDQCIRIHKCLPSTCQMM 689
I +GTPGK D+ +K D IK+FVLDEAD +I+ + Q I + LP +CQ++
Sbjct: 278 IYVGTPGKTLDF-LKRKFIDTKNIKLFVLDEADDLIDIKNNMSSQVETIKRFLPRSCQIL 336
Query: 690 FFSATYGTAVMQFAE 734
FSATY +V +FA+
Sbjct: 337 LFSATYNDSVRKFAD 351
Score = 55.2 bits (127), Expect = 2e-06
Identities = 27/67 (40%), Positives = 43/67 (64%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
+N+IAQSQ+G+GKT FV+AML +++ + Q +C+ PT EL+ Q +V K+
Sbjct: 199 KNLIAQSQNGSGKTLTFVIAMLCKINRTLSSLQAVCICPTRELSQQNYDVVCNFTKYL-N 257
Query: 451 IKLKYAV 471
+K+ AV
Sbjct: 258 VKVFLAV 264
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 61.7 bits (143), Expect = 3e-08
Identities = 30/60 (50%), Positives = 39/60 (65%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI 453
+MI Q+Q+GTGKTAAF L MLSR+D + PQ+L L+PT ELA+Q A P +
Sbjct: 62 DMIGQAQTGTGKTAAFALPMLSRIDPARREPQLLILAPTRELALQVATAFETYASQLPGV 121
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 61.3 bits (142), Expect = 4e-08
Identities = 27/59 (45%), Positives = 41/59 (69%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCP 447
++++ Q+Q+GTGKTA+F L +L+R+D + PQ L L+PT ELAIQ E + A + P
Sbjct: 45 RDVLGQAQTGTGKTASFALPILARIDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIP 103
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
H+++GTPG++ D K G D+ +IK VLDEAD M+ R G D I + P + Q
Sbjct: 128 HVVVGTPGRVIDHLEK-GSLDLSRIKTMVLDEADEML-RMGFIDDVETILQKTPESRQTA 185
Query: 690 FFSATYGTAVMQFAEIIVSNP 752
FSAT +A+ + A + +P
Sbjct: 186 LFSATMPSAIKRIATTYLRDP 206
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 61.3 bits (142), Expect = 4e-08
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 441
N+IAQ+++G+GKTA F LAMLS+V+ N Q LC+ PT ELA Q +V K+ +F
Sbjct: 139 NIIAQAKNGSGKTATFALAMLSKVNVNVPLVQALCICPTRELATQNVQVIQKLGQF 194
Score = 52.0 bits (119), Expect = 2e-05
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQ-DQCIRIHKCLPSTCQM 686
H+ +GTPGK D+ +K + ++ + + VLDEAD +IN+Q + Q ++I Q+
Sbjct: 216 HLYVGTPGKTMDF-LKKRIMNVTNVVMLVLDEADELINQQNNMGPQVLQIRNFFRGPVQI 274
Query: 687 MFFSATYGTAVMQFAEIIVSNPL*SAFERRRIT 785
+ FSAT+ V FA I +R ++T
Sbjct: 275 VLFSATFSDNVYNFATKIAPRAHVIQVKREQLT 307
Score = 39.5 bits (88), Expect = 0.13
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2
Query: 167 LHLKPNLLKGVYAMGFNAPSKIQETALP 250
L L P+LLKG+ MGF PSKIQ+ ALP
Sbjct: 104 LPLSPDLLKGIQNMGFAKPSKIQQCALP 131
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 60.9 bits (141), Expect = 5e-08
Identities = 32/89 (35%), Positives = 52/89 (58%)
Frame = +3
Query: 489 QGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 668
+G + I+I TPG++ + G D+ + FVLDEAD M++ G D ++I+K L
Sbjct: 120 RGMAMGADIVIATPGRLISH-LNLGSADLSHVSYFVLDEADRMLD-MGFFDDIMQIYKQL 177
Query: 669 PSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
PS+CQ + FSAT + + A I+ +P+
Sbjct: 178 PSSCQTVMFSATMPPKIRKLAASILRDPI 206
Score = 39.1 bits (87), Expect = 0.17
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNK---NYPQVLCLSPTYELAIQTGEVAAKMAKF 441
+++IA +Q+GTGKTAA++L +L R+ + + + + ++PT ELA Q + + F
Sbjct: 39 RDVIACAQTGTGKTAAYLLPILDRLSAGEFASDVVNAVIMAPTRELAQQIDQQVEGFSYF 98
Query: 442 CP 447
P
Sbjct: 99 MP 100
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 60.9 bits (141), Expect = 5e-08
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 438
+++ +Q+GTGKTAAF L +LSR+D+ KN PQ L L PT ELAIQ E A+
Sbjct: 44 DVLGLAQTGTGKTAAFSLPLLSRIDTTKNKPQALVLCPTRELAIQVAEAFQTYAR 98
Score = 44.4 bits (100), Expect = 0.005
Identities = 26/89 (29%), Positives = 45/89 (50%)
Frame = +3
Query: 489 QGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 668
+ K + +++GTPG++ D ++ G D+ +K VLDEAD M+ R G + I +
Sbjct: 119 RALKQNPQVIVGTPGRVMDH-LRRGTLDLSDLKHLVLDEADEML-RMGFIEDIDWILEHT 176
Query: 669 PSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
P Q FSAT + + + +P+
Sbjct: 177 PKDKQTALFSATMPHQIKRITDQYQKDPV 205
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 60.5 bits (140), Expect = 6e-08
Identities = 28/63 (44%), Positives = 43/63 (68%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
++++ Q+Q+GTGKTAAF L +L R++S + PQVL L+PT ELA+Q + A P
Sbjct: 109 RDLVGQAQTGTGKTAAFALPLLERLESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPH 168
Query: 451 IKL 459
+K+
Sbjct: 169 LKV 171
Score = 44.8 bits (101), Expect = 0.003
Identities = 26/80 (32%), Positives = 45/80 (56%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
+++GTPG++ D ++ G D + VLDEAD M+ R G D I + LP Q++
Sbjct: 193 VVVGTPGRVMDH-MRQGTLDTSGLTSLVLDEADEML-RMGFIDDVEWILEQLPKERQVVL 250
Query: 693 FSATYGTAVMQFAEIIVSNP 752
FSAT + + ++ +++P
Sbjct: 251 FSATMPPEIRRLSKRYLNDP 270
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 60.5 bits (140), Expect = 6e-08
Identities = 33/94 (35%), Positives = 53/94 (56%)
Frame = +3
Query: 474 RGRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIR 653
+G + K +HIL+ TPG++ D + G + +++VFVLDEAD M++ G R
Sbjct: 115 QGNQVKALKRGAHILVATPGRLLDL-MNQGHIKLNQLEVFVLDEADRMLD-MGFLPDLKR 172
Query: 654 IHKCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
I LP+ Q +FFSAT + + A ++S P+
Sbjct: 173 IITQLPTQRQSLFFSATLAPKITELAHSLLSKPV 206
Score = 42.7 bits (96), Expect = 0.014
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 5/54 (9%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNK-----NYPQVLCLSPTYELAIQTGE 417
++++ +Q+GTGKTAA L +L+++ N ++P L L+PT ELAIQ G+
Sbjct: 40 RDVLGCAQTGTGKTAALALPILNQLGKNSRKSIPHHPLALVLAPTRELAIQIGD 93
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 60.5 bits (140), Expect = 6e-08
Identities = 30/77 (38%), Positives = 46/77 (59%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
+++ Q+Q+GTGKTAAF + +L +DS N Q + L PT ELAIQ E K++ + P+
Sbjct: 42 KDVTGQAQTGTGKTAAFGIPLLENIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPK 101
Query: 451 IKLKYAVRGEELPRGSK 501
I + G+ + R K
Sbjct: 102 IDVLPVYGGQPIDRQIK 118
Score = 50.8 bits (116), Expect = 5e-05
Identities = 28/80 (35%), Positives = 45/80 (56%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
I+IGTPG++ D + G + IK +LDEAD M++ G ++ I + +P Q +
Sbjct: 126 IIIGTPGRVMDH-IDRGTLSLNNIKTVILDEADEMLD-MGFREDIEYILEDIPYERQFLL 183
Query: 693 FSATYGTAVMQFAEIIVSNP 752
FSAT ++Q A+ +NP
Sbjct: 184 FSATLPQEILQLAQRYQTNP 203
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 60.1 bits (139), Expect = 9e-08
Identities = 29/58 (50%), Positives = 39/58 (67%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCP 447
+++ ++Q+GTGKTAAF L +L R+D PQVL L+PT ELAIQ E + AK P
Sbjct: 83 DLLGEAQTGTGKTAAFALPLLDRLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLP 140
Score = 44.4 bits (100), Expect = 0.005
Identities = 26/82 (31%), Positives = 43/82 (52%)
Frame = +3
Query: 507 SHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQM 686
+H+++GTPG++ D ++ ++ + VLDEAD M+ R G D I + P+ Q
Sbjct: 164 AHVIVGTPGRVMD-HIERKSLNLDSLTTLVLDEADEML-RMGFIDDVEWILQHTPAERQT 221
Query: 687 MFFSATYGTAVMQFAEIIVSNP 752
FSAT A+ + A + P
Sbjct: 222 ALFSATMPDAIRRVAHRYLREP 243
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 60.1 bits (139), Expect = 9e-08
Identities = 27/48 (56%), Positives = 37/48 (77%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGE 417
+++ +Q+GTGKTAAF L +LSR+D+N PQ+L L+PT ELAIQ E
Sbjct: 63 HLLGVAQTGTGKTAAFALPLLSRIDANVAEPQILVLAPTRELAIQVAE 110
Score = 56.8 bits (131), Expect = 8e-07
Identities = 31/87 (35%), Positives = 46/87 (52%)
Frame = +3
Query: 489 QGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 668
+G K + +++GTPG+M D ++ G + +K VLDEAD M+ R G D I
Sbjct: 138 RGLKRGAQVIVGTPGRMLD-HLRKGTLKLDGLKALVLDEADEML-RMGFIDDVEAILAKT 195
Query: 669 PSTCQMMFFSATYGTAVMQFAEIIVSN 749
P TCQ FSAT + + A+ + N
Sbjct: 196 PDTCQRALFSATMPPQIKKVAQTYLKN 222
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 60.1 bits (139), Expect = 9e-08
Identities = 29/86 (33%), Positives = 52/86 (60%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
+ H ++I TPG++ D +K ++ +K+ V+DEAD M+ + G Q Q + I + +P+
Sbjct: 320 QQHVKVIIATPGRLLDI-IKQSSVELCGVKIVVVDEADTML-KMGFQQQVLDILENIPND 377
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNPL 755
CQ + SAT T++ Q A ++ NP+
Sbjct: 378 CQTILVSATIPTSIEQLASQLLHNPV 403
Score = 51.2 bits (117), Expect = 4e-05
Identities = 27/73 (36%), Positives = 41/73 (56%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
++++A + +G+GKTAAF+L ++ R P L L+PT ELAIQ A ++ P
Sbjct: 241 RDILASADTGSGKTAAFLLPVIMRALFESKTPSALILTPTRELAIQIERQAKELMSGLPR 300
Query: 451 IKLKYAVRGEELP 489
+K V G LP
Sbjct: 301 MKTVLLVGGLPLP 313
>UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2;
Ostreococcus|Rep: RNA helicase-like protein -
Ostreococcus tauri
Length = 492
Score = 59.7 bits (138), Expect = 1e-07
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 435
L P +N+IAQ+ +G+GKT F L MLSR+D PQ L + PT EL +Q V +M
Sbjct: 123 LMPPHRNLIAQAHNGSGKTTCFTLGMLSRIDPAVKTPQGLMICPTRELVVQNVSVMERMG 182
Query: 436 KF 441
K+
Sbjct: 183 KY 184
Score = 52.0 bits (119), Expect = 2e-05
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +3
Query: 516 LIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTC---QM 686
+IGTPGK+ W ++ +K+ V DEAD M+ GH+ +I K L + Q+
Sbjct: 210 VIGTPGKILRW-MRERQLACNNMKILVFDEADHMMATDGHRVDSTKILKHLSMSAKAWQV 268
Query: 687 MFFSATYGTAVMQFAEIIVSN 749
+ FSAT+ AV FA +V N
Sbjct: 269 LLFSATFNEAVKSFATKVVPN 289
Score = 45.6 bits (103), Expect = 0.002
Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 125 DPNSPLYSVKTFEALHLKPNLLKGVYA-MGFNAPSKIQETALPTP*LILHR 274
DP++P S KTFE L L LL+G+Y M F PSKIQ LP + HR
Sbjct: 78 DPSTPYSSAKTFEDLGLSAELLRGLYGEMKFEKPSKIQAETLPLILMPPHR 128
>UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2;
Plasmodium chabaudi|Rep: DEAD-box RNA helicase, putative
- Plasmodium chabaudi
Length = 374
Score = 59.7 bits (138), Expect = 1e-07
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 435
+ D +N+IAQSQ+G+GKT FV+AMLS+++ Q +C+ PT ELA Q +V K
Sbjct: 258 ILDSNRNLIAQSQNGSGKTLTFVIAMLSKINRALYSLQAVCICPTRELAQQNYDVVGKFT 317
Query: 436 KF 441
K+
Sbjct: 318 KY 319
Score = 37.9 bits (84), Expect = 0.39
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +3
Query: 501 NHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEAD 611
N I +GTPGK D+ +K D IK+FVLDEAD
Sbjct: 338 NGIQIYVGTPGKTLDF-LKRKYIDTNNIKIFVLDEAD 373
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 59.3 bits (137), Expect = 1e-07
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVD--SNKNYPQVLCLSPTYELAIQTGEVAAKMAKFC 444
++++ Q+Q+GTGKTAAF L +++ +D S PQVL L+PT ELAIQ E AK
Sbjct: 45 RDVLGQAQTGTGKTAAFALPLINNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNV 104
Query: 445 PEIKLKYAVRGEELPRGSKI 504
P + + G+E GS+I
Sbjct: 105 PNLDVACIYGGQEY--GSQI 122
Score = 47.2 bits (107), Expect = 6e-04
Identities = 27/92 (29%), Positives = 44/92 (47%)
Frame = +3
Query: 477 GRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRI 656
G + K +++GT G++ D ++ G + ++ VLDEAD M+ R G D +
Sbjct: 119 GSQIRALKQGVKVVVGTTGRVMDH-IEKGTLQLDNLRALVLDEADEML-RMGFIDDVKFV 176
Query: 657 HKCLPSTCQMMFFSATYGTAVMQFAEIIVSNP 752
+ CQ + FSAT T + E + NP
Sbjct: 177 LSHVSDECQRLLFSATIPTDIADIIEEYLRNP 208
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 59.3 bits (137), Expect = 1e-07
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI 453
+++ +Q+GTGKTAAF + MLS++D PQ L L PT ELA+Q E + + ++
Sbjct: 52 DVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQL 111
Query: 454 KL-------KYAVRGEELPRGSKITV 510
+ YAV+ L RG+++ V
Sbjct: 112 NVLPIYGGSSYAVQLAGLRRGAQVVV 137
Score = 48.4 bits (110), Expect = 3e-04
Identities = 27/87 (31%), Positives = 45/87 (51%)
Frame = +3
Query: 492 GFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLP 671
G + + +++GTPG+M D ++ D+ ++ VLDEAD M+ G D RI P
Sbjct: 128 GLRRGAQVVVGTPGRMID-HLERATLDLSRVDFLVLDEADEMLT-MGFADDVERILSETP 185
Query: 672 STCQMMFFSATYGTAVMQFAEIIVSNP 752
Q+ FSAT A+ + + + +P
Sbjct: 186 EYKQVALFSATMPPAIRKLSAKYLHDP 212
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 58.8 bits (136), Expect = 2e-07
Identities = 31/117 (26%), Positives = 63/117 (53%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
H++ GTPG++FD ++ IK+ VLDEAD M+N+ G ++Q +++ LP Q++
Sbjct: 137 HVVAGTPGRVFDM-IRRRSLRTRAIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVV 194
Query: 690 FFSATYGTAVMQFAEIIVSNPL*SAFERRRITGIT*NHIM*SAKVQKTNFRAICNIY 860
SAT +++ +++P+ +R +T + + ++ F +C++Y
Sbjct: 195 LISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 251
Score = 38.3 bits (85), Expect = 0.30
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 155 TFEALHLKPNLLKGVYAMGFNAPSKIQETAL 247
TF+ + L+ +LL+G+YA GF PS IQ+ A+
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAI 69
Score = 34.3 bits (75), Expect = 4.9
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVD 348
+++IAQSQSGTGKTA F +++L +D
Sbjct: 76 RDVIAQSQSGTGKTATFSVSVLQCLD 101
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 58.8 bits (136), Expect = 2e-07
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = +3
Query: 507 SHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQM 686
+HILIGTPG++ D K G + IK VLDEAD M++ G ++ I+I +P Q
Sbjct: 123 AHILIGTPGRIQDHLAK-GTLTLESIKTLVLDEADRMLD-MGFYEEIIKIGSNMPKQKQT 180
Query: 687 MFFSATYGTAVMQFAEIIVSNPL 755
+ FSAT+ + A+ ++ +PL
Sbjct: 181 LLFSATFPPKIESLAKALLKDPL 203
Score = 47.2 bits (107), Expect = 6e-04
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
++++AQS++G+GKT AF + + D N PQ + ++PT ELA Q K+A +
Sbjct: 41 KDILAQSKTGSGKTLAFGIPAVMGTDVKSNKPQTIVITPTRELAEQVAMELRKIAAYKAN 100
Query: 451 IKL 459
+K+
Sbjct: 101 LKI 103
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 58.8 bits (136), Expect = 2e-07
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
IL+ TPG++ D + G D+ ++++FVLDEAD M++ G R+ K LP+ Q +F
Sbjct: 125 ILVATPGRLLDLQGQ-GFVDLSRLEIFVLDEADRMLD-MGFLHDVRRVLKLLPAVKQTLF 182
Query: 693 FSATYGTAVMQFAEIIVSNPL 755
FSAT VM ++ NP+
Sbjct: 183 FSATMPPEVMDLVNGLLKNPV 203
Score = 35.9 bits (79), Expect = 1.6
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRV--DSNKNYP-QVLCLSPTYELAIQTGEVAAKMAKF 441
++++ +Q+GTGKT AF +L R+ D P + L L+PT ELA+Q E K
Sbjct: 39 RDVLGCAQTGTGKTCAFAAPILQRLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKH 98
Query: 442 CP 447
P
Sbjct: 99 LP 100
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 58.8 bits (136), Expect = 2e-07
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Frame = +3
Query: 453 KVKVCS*RGRTSQG-----FKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVM 617
KVKV + G S G + H+++ TPG++ D ++ G D+G I VLDEAD M
Sbjct: 99 KVKVLAVYGGQSIGNQIAQLRRGVHVIVATPGRLIDH-IERGTVDLGGISTVVLDEADEM 157
Query: 618 INRQGHQDQCIRIHKCLPSTCQMMFFSATYGTAVMQFAEIIVSNP 752
+N G D RI +P Q M FSAT +++ A + NP
Sbjct: 158 LN-MGFIDDIERILSHVPERRQTMLFSATVSKPILRIARKYMRNP 201
Score = 48.4 bits (110), Expect = 3e-04
Identities = 22/71 (30%), Positives = 44/71 (61%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI 453
+++ ++Q+GTGKTAAF + +L +++ + PQ L + PT EL +Q E ++ K+ ++
Sbjct: 43 DVVGEAQTGTGKTAAFAIPVLENLEAER-VPQALIICPTRELCLQVSEEIKRIGKYM-KV 100
Query: 454 KLKYAVRGEEL 486
K+ G+ +
Sbjct: 101 KVLAVYGGQSI 111
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 58.8 bits (136), Expect = 2e-07
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 438
+++I Q+Q+GTGKTAAF L +L +VD++K Q + ++PT ELAIQ GE K+ K
Sbjct: 40 KDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGK 95
Score = 53.6 bits (123), Expect = 7e-06
Identities = 30/91 (32%), Positives = 47/91 (51%)
Frame = +3
Query: 480 RTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIH 659
R + K H HI++GTPG++ D + + ++ VLDEAD M+N G + I
Sbjct: 112 RQIRALKKHPHIIVGTPGRILD-HINRKTLRLQNVETVVLDEADEMLN-MGFIEDIEAIL 169
Query: 660 KCLPSTCQMMFFSATYGTAVMQFAEIIVSNP 752
+P T Q + FSAT + + AE ++ P
Sbjct: 170 TDVPETHQTLLFSATMPDPIRRIAERFMTEP 200
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 58.8 bits (136), Expect = 2e-07
Identities = 31/117 (26%), Positives = 63/117 (53%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
H++ GTPG++FD ++ IK+ VLDEAD M+N+ G ++Q +++ LP Q++
Sbjct: 158 HVVAGTPGRVFDM-IRRRSLRTRAIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVV 215
Query: 690 FFSATYGTAVMQFAEIIVSNPL*SAFERRRITGIT*NHIM*SAKVQKTNFRAICNIY 860
SAT +++ +++P+ +R +T + + ++ F +C++Y
Sbjct: 216 LISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 272
Score = 49.6 bits (113), Expect = 1e-04
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQ 408
+++IAQSQSGTGKTA F +++L +D Q L L+PT ELA+Q
Sbjct: 76 RDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQ 121
Score = 38.3 bits (85), Expect = 0.30
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 155 TFEALHLKPNLLKGVYAMGFNAPSKIQETAL 247
TF+ + L+ +LL+G+YA GF PS IQ+ A+
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAI 69
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 58.4 bits (135), Expect = 3e-07
Identities = 27/80 (33%), Positives = 51/80 (63%)
Frame = +1
Query: 247 SYTLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAA 426
S +A ++++A++++GTGK+ A+++ ML R+D K++ Q L L PT ELA+Q +++
Sbjct: 119 SIPIALSGRDILARAKNGTGKSGAYLIPMLERIDLKKDHIQALVLVPTRELALQVSQISI 178
Query: 427 KMAKFCPEIKLKYAVRGEEL 486
++AK +K+ G L
Sbjct: 179 QIAKHLGGVKVMATTGGTNL 198
Score = 33.9 bits (74), Expect = 6.4
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 158 FEALHLKPNLLKGVYAMGFNAPSKIQETALP 250
FE LK LL G++ MG+ PS IQE ++P
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIP 121
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 58.4 bits (135), Expect = 3e-07
Identities = 30/86 (34%), Positives = 48/86 (55%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K SHI++GTPG++ D + G +K ++DEAD+M++ G D RI LP
Sbjct: 120 KQKSHIVVGTPGRVLD-HCETGTLKCSNVKYVIIDEADLMLD-MGFLDDVKRILSYLPEN 177
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNPL 755
+M FSAT G A+ + +++P+
Sbjct: 178 ITIMLFSATMGEALYALTDEFMNSPV 203
Score = 46.4 bits (105), Expect = 0.001
Identities = 23/51 (45%), Positives = 34/51 (66%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQ 408
LA +++IA+S++G+GKTAAF + + + +N PQ L L PT ELA Q
Sbjct: 37 LALEGKDIIAKSKTGSGKTAAFAIPICESIVWEENLPQALVLEPTRELAYQ 87
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 58.0 bits (134), Expect = 3e-07
Identities = 29/93 (31%), Positives = 53/93 (56%)
Frame = +3
Query: 477 GRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRI 656
G+ K H+++GTPG++ D ++ G D+ ++K VLDEAD M+ R G + +
Sbjct: 125 GQQLAALKRGVHVIVGTPGRVIDH-LERGTLDLSELKTLVLDEADEML-RMGFIEDVEEV 182
Query: 657 HKCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
+ LP++ Q+ FSAT + + A+ + +P+
Sbjct: 183 LRKLPASRQVALFSATMPPQIRRIAQTYLQDPI 215
Score = 57.6 bits (133), Expect = 5e-07
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 435
++++ Q+Q+GTGKTAAF L +L+R N+ PQVL L+PT ELAIQ E + A
Sbjct: 53 RDVLGQAQTGTGKTAAFALPLLTRTVLNQVKPQVLVLAPTRELAIQVAEAFQRYA 107
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 57.6 bits (133), Expect = 5e-07
Identities = 34/117 (29%), Positives = 64/117 (54%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
HI++GTPG++FD + IK+FVLDEAD M++R G +DQ I + L ++ Q++
Sbjct: 154 HIVVGTPGRVFDM-LNRRYLSPKWIKMFVLDEADEMLSR-GFKDQIYEIFQKLNTSIQVV 211
Query: 690 FFSATYGTAVMQFAEIIVSNPL*SAFERRRITGIT*NHIM*SAKVQKTNFRAICNIY 860
SAT T V++ + + +P+ ++ +T + + ++ +C++Y
Sbjct: 212 LLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLY 268
Score = 47.2 bits (107), Expect = 6e-04
Identities = 23/56 (41%), Positives = 36/56 (64%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 441
++IAQ+QSGTGKTA F +++L +++ Q L L+PT ELA Q +V + +
Sbjct: 72 DVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDY 127
Score = 39.1 bits (87), Expect = 0.17
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +2
Query: 149 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETAL 247
V F+ ++LK +LL+G+YA GF PS IQ+ A+
Sbjct: 32 VDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAI 64
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 57.2 bits (132), Expect = 6e-07
Identities = 30/62 (48%), Positives = 43/62 (69%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
++++ Q+Q+GTGKTAAF L +LSR+D + PQVL L+PT ELA Q VAA ++
Sbjct: 47 RDVLGQAQTGTGKTAAFALPLLSRLDLQRREPQVLVLAPTRELAQQ---VAASFVQYGRG 103
Query: 451 IK 456
+K
Sbjct: 104 VK 105
Score = 50.8 bits (116), Expect = 5e-05
Identities = 30/98 (30%), Positives = 48/98 (48%)
Frame = +3
Query: 492 GFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLP 671
G + + +++GTPG++ D + G + + VLDEAD M+ R G D R+ P
Sbjct: 124 GLRRGAQVIVGTPGRVIDH-LDRGSLKLDGLNALVLDEADEML-RMGFIDDVKRVVSDTP 181
Query: 672 STCQMMFFSATYGTAVMQFAEIIVSNPL*SAFERRRIT 785
Q +FFSAT + + + +PL A E + T
Sbjct: 182 KDAQRVFFSATLPDEISRIVNHYLVDPLRIAIETKTKT 219
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 57.2 bits (132), Expect = 6e-07
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQD-QCIRIHKCLPS 674
K HI+IGTPG++ D ++ ++GK+ + VLDEAD M++ +D + I H +P
Sbjct: 119 KGSIHIIIGTPGRLLDH-LRRKTINLGKLSMLVLDEADQMLHMGFLRDVEDIMTH--IPK 175
Query: 675 TCQMMFFSATYGTAVMQFAEIIVSNPL*SAFERRRIT 785
Q MFFSAT V AE + +P+ + +R+T
Sbjct: 176 RRQNMFFSATMPNQVRTLAEQYMKDPVQIQVQSKRVT 212
Score = 52.8 bits (121), Expect = 1e-05
Identities = 26/56 (46%), Positives = 39/56 (69%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 438
++++AQ+Q+GTGKT AF+L +L RV+ K Q L ++PT ELAIQ K+A+
Sbjct: 41 RDVMAQAQTGTGKTLAFILPILERVNVEKPTIQALIITPTRELAIQITAETKKLAE 96
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 57.2 bits (132), Expect = 6e-07
Identities = 26/73 (35%), Positives = 46/73 (63%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI 453
N+I QSQ+GTGK+ AF+L ++ +DS PQ + ++PT ELA Q + A +++F +
Sbjct: 43 NLIGQSQTGTGKSHAFLLPLMQLIDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGV 102
Query: 454 KLKYAVRGEELPR 492
+K + G ++ +
Sbjct: 103 SVKVFIGGTDIEK 115
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 56.8 bits (131), Expect = 8e-07
Identities = 28/74 (37%), Positives = 46/74 (62%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
+++ Q+Q+GTGKTAAF + ++ R+D + Q L LSPT ELAIQT E +++ K+
Sbjct: 43 KDVTGQAQTGTGKTAAFGIPIIERLDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKG 102
Query: 451 IKLKYAVRGEELPR 492
+ + G+ + R
Sbjct: 103 LNVVPIYGGQPIER 116
Score = 48.4 bits (110), Expect = 3e-04
Identities = 28/102 (27%), Positives = 49/102 (48%)
Frame = +3
Query: 480 RTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIH 659
R + K ++IGTPG++ D +K G + + +F+LDEAD M++ G ++ I
Sbjct: 116 RQLRALKGTVQVVIGTPGRVIDH-IKRGTLHLDSVTMFILDEADQMLD-MGFREDIEDIF 173
Query: 660 KCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL*SAFERRRIT 785
+ P Q + FSAT ++ +P R+ +T
Sbjct: 174 RDTPKDRQTILFSATMPQPILDITRRFQRDPQFVKITRKELT 215
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 56.8 bits (131), Expect = 8e-07
Identities = 24/72 (33%), Positives = 48/72 (66%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
++++A++++GTGKTA+F++ L+R++++ ++ Q L L PT ELA+QT +V + P
Sbjct: 74 RDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPN 133
Query: 451 IKLKYAVRGEEL 486
+++ G L
Sbjct: 134 LQVMITTGGTTL 145
Score = 51.2 bits (117), Expect = 4e-05
Identities = 28/75 (37%), Positives = 43/75 (57%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
HIL+GTPG++ D G K G+ + K VFV+DEAD +++ + + P Q+M
Sbjct: 157 HILVGTPGRILDLGSK-GIASLNKCGVFVMDEADKLLS-EDFMPVIEQTLALCPQERQVM 214
Query: 690 FFSATYGTAVMQFAE 734
FSAT+ V +F +
Sbjct: 215 LFSATFPWTVKEFKD 229
Score = 40.7 bits (91), Expect = 0.056
Identities = 23/58 (39%), Positives = 30/58 (51%)
Frame = +2
Query: 77 RQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALP 250
+QGL D+ Q +D + S FE L+ LL G+Y GF PS IQE A+P
Sbjct: 13 KQGLAAPPKDLRPQTEDVTATQGS--RFEDFGLRRELLMGIYTAGFERPSPIQEQAIP 68
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 56.8 bits (131), Expect = 8e-07
Identities = 26/86 (30%), Positives = 53/86 (61%), Gaps = 7/86 (8%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI 453
+++ +Q+G+GKTAAF L +L+++D ++ +PQ+L ++PT ELAIQ + K+
Sbjct: 44 DVLGMAQTGSGKTAAFALPLLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGT 103
Query: 454 KL-------KYAVRGEELPRGSKITV 510
++ +Y ++ L +G+++ V
Sbjct: 104 RIVTLYGGQRYDIQLRALKQGAQVVV 129
Score = 48.0 bits (109), Expect = 4e-04
Identities = 25/88 (28%), Positives = 47/88 (53%)
Frame = +3
Query: 489 QGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 668
+ K + +++GTPG++ D ++ G ++ +++ VLDEAD M+ R G D + L
Sbjct: 119 RALKQGAQVVVGTPGRILDH-IRRGTLNLSELRFIVLDEADEML-RMGFIDDVETVMAEL 176
Query: 669 PSTCQMMFFSATYGTAVMQFAEIIVSNP 752
P Q FSAT + + + +++P
Sbjct: 177 PENHQTALFSATMPEPIRRITKRFMNDP 204
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 56.4 bits (130), Expect = 1e-06
Identities = 33/93 (35%), Positives = 51/93 (54%)
Frame = +3
Query: 477 GRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRI 656
G + K + I++GTPG++ D K + + +KV VLDEAD M+N G + I
Sbjct: 118 GPQVKALKQGTAIVVGTPGRLIDLLNK-NVLQLDGLKVGVLDEADEMLN-MGFIEDIETI 175
Query: 657 HKCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
K +P+T Q FSAT A+ + A+ + +PL
Sbjct: 176 LKAVPNTAQRALFSATMPNAIRKLAKTFLKDPL 208
Score = 54.0 bits (124), Expect = 6e-06
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEV----AAKM 432
Q+++ ++Q+GTGKTAAF L L+++D++ QVL ++PT ELAIQ E AAKM
Sbjct: 46 QDVLGEAQTGTGKTAAFGLPALAKIDASVKQTQVLVVTPTRELAIQVAEALEGFAAKM 103
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 56.4 bits (130), Expect = 1e-06
Identities = 30/92 (32%), Positives = 52/92 (56%)
Frame = +3
Query: 477 GRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRI 656
G + N +HIL+ TPG++ D K + + ++ V DEAD M++ G +D+ + +
Sbjct: 124 GEQIRQLANGTHILVATPGRLLDLLRKRAL-SLSQLTHLVFDEADRMLD-MGFKDEIVEV 181
Query: 657 HKCLPSTCQMMFFSATYGTAVMQFAEIIVSNP 752
K LPST Q + FSAT ++ F+ ++ +P
Sbjct: 182 LKRLPSTRQTLLFSATLDDRMLSFSRRLLRSP 213
>UniRef50_Q55CP6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 765
Score = 56.4 bits (130), Expect = 1e-06
Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Frame = +3
Query: 477 GRTSQGFKN--HSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCI 650
G S G +N I+IGTPG++ VK G D+ IK FVLDEAD +I+ I
Sbjct: 358 GEKSNGGRNKIEGDIIIGTPGRLESL-VKEGSIDLSSIKFFVLDEADQLIDDNLAIVNFI 416
Query: 651 RIHKCLPSTCQMMFFSAT-YGTAVMQFAEIIVSNP 752
+ Q++FFSAT + T V++F E I NP
Sbjct: 417 YNKLPIGQNLQVLFFSATLHSTKVIKFCEQITKNP 451
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 56.0 bits (129), Expect = 1e-06
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +3
Query: 513 ILIGTPGKMFD-WGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
ILI TPG+M D + K FD K++V VLDEAD M++ G +I LP Q +
Sbjct: 130 ILIATPGRMMDLYNQKAVRFD--KLEVLVLDEADRMLD-MGFIHDIKKILAILPKKRQNL 186
Query: 690 FFSATYGTAVMQFAEIIVSNPL*SAFERRRITGIT 794
FSAT+ + Q A+ +V+NP+ + R T ++
Sbjct: 187 LFSATFSPEIRQLAKGLVNNPIEISVTPRNATAVS 221
Score = 40.7 bits (91), Expect = 0.056
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRV----DSNKNYPQVLCLSPTYELAIQTGE 417
Q+++A +Q+GTGKTA F L +L + ++ N + L L+PT ELA Q E
Sbjct: 43 QDVMAAAQTGTGKTAGFTLPLLEILSKGENAQSNQVRALVLTPTRELAAQVAE 95
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 56.0 bits (129), Expect = 1e-06
Identities = 34/123 (27%), Positives = 62/123 (50%)
Frame = +3
Query: 489 QGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 668
Q + ++I TPG++ D V+ ++G+++V VLDEAD M++ G RI L
Sbjct: 141 QTLRRGVELVIATPGRLLDH-VQQKSINLGQVQVLVLDEADRMLD-MGFLPDLQRIINLL 198
Query: 669 PSTCQMMFFSATYGTAVMQFAEIIVSNPL*SAFERRRITGIT*NHIM*SAKVQKTNFRAI 848
P T Q + FSAT+ + + A+ + +P RR T ++ + ++ A+
Sbjct: 199 PKTRQNLLFSATFSPEIQKLAKSFMVSPTLIEVARRNATSENIKQVIFALDSEEDKRMAV 258
Query: 849 CNI 857
C++
Sbjct: 259 CHL 261
Score = 36.7 bits (81), Expect = 0.91
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRV-------DSNKNYP-QVLCLSPTYELAIQTGEVAAK 429
+++ +Q+GTGKTA F L +L+R+ S +P + L L+PT ELA Q
Sbjct: 59 DVMGAAQTGTGKTAGFSLPILNRLMPLATENTSPARHPVRALILTPTRELADQVAANVHT 118
Query: 430 MAKFCP 447
AKF P
Sbjct: 119 YAKFTP 124
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 56.0 bits (129), Expect = 1e-06
Identities = 32/93 (34%), Positives = 51/93 (54%)
Frame = +3
Query: 477 GRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRI 656
G Q K+ HI++GTPG++ D V+ D+ +K+ VLDEAD M++ G +D I
Sbjct: 114 GPQIQSLKHSPHIIVGTPGRVMD-HVEKRRIDLRNVKLRVLDEADRMLD-MGFEDDLRII 171
Query: 657 HKCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
P Q + FSAT+ + + A+ + NP+
Sbjct: 172 FGQTPKQVQTLLFSATFTEQIERVAKQYLHNPV 204
Score = 47.6 bits (108), Expect = 5e-04
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
+++I Q+Q+G+GKT FV+ L +++ N Q + L PT ELA Q + AK
Sbjct: 42 KDVIGQAQTGSGKTLCFVIPALEKIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAKDIGN 101
Query: 451 IKLKYAVRGEELPRGSKI 504
IK+ G+ P G +I
Sbjct: 102 IKVTTLCGGQ--PMGPQI 117
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 56.0 bits (129), Expect = 1e-06
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 435
L P + I +Q+GTGKTAAF L +L +D+N ++ Q L LSPT EL Q + K
Sbjct: 36 LLKSPTDFIGLAQTGTGKTAAFGLPVLHHIDANSDHIQALILSPTRELVQQIKKQLFKFT 95
Query: 436 KFCPE-IKLKYAVRGEELPR 492
K+ + I L+ GE++ R
Sbjct: 96 KYVDDRIFLEAVFGGEKIDR 115
Score = 43.2 bits (97), Expect = 0.010
Identities = 25/75 (33%), Positives = 38/75 (50%)
Frame = +3
Query: 480 RTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIH 659
R K +HI+I TPG++ D ++ G D+ +K +LDEAD M++ QD +
Sbjct: 115 RQMNNLKRTTHIVIATPGRLIDL-IERGAVDISHVKTVILDEADEMLSMGFKQDLNRILK 173
Query: 660 KCLPSTCQMMFFSAT 704
S + FSAT
Sbjct: 174 FTTKSDRKTWLFSAT 188
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 56.0 bits (129), Expect = 1e-06
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 LADPP-QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKM 432
+ DP +++IAQ+QSGTGKT AF + +LS++D ++ Q L L+PT ELA Q V ++
Sbjct: 125 IRDPSNRHVIAQAQSGTGKTGAFSIGVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEI 184
Query: 433 AKFCPEIKLKYAVRGEE 483
P + + + G +
Sbjct: 185 GSRIPGLDIAIFIGGAQ 201
Score = 46.4 bits (105), Expect = 0.001
Identities = 28/95 (29%), Positives = 47/95 (49%)
Frame = +3
Query: 501 NHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTC 680
+H HI I TPG+ D V G + K+ VLDEAD M++ +Q I + P
Sbjct: 212 SHPHICICTPGRALDLIVS-GHLRVQNFKMAVLDEADQMLS-DNFIEQVNDIMEYFPEDV 269
Query: 681 QMMFFSATYGTAVMQFAEIIVSNPL*SAFERRRIT 785
Q++ FSAT ++ +++P ++ ++T
Sbjct: 270 QILLFSATISQSIFHIMNTFMNDPFRILIKKEQLT 304
Score = 38.3 bits (85), Expect = 0.30
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +2
Query: 149 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETAL 247
V F+ + L P LL+GVY+ GF APS+IQ A+
Sbjct: 90 VDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAI 122
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 55.6 bits (128), Expect = 2e-06
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
++++ ++Q+GTGKTAAF L L+++D++ PQ++ L+PT ELA+Q E K
Sbjct: 53 KDVLGEAQTGTGKTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKG 112
Query: 451 IKL-------KYAVRGEELPRGSKITV 510
+++ Y + ++L RG+++ V
Sbjct: 113 LRVATLYGGQSYGPQFQQLERGAQVVV 139
Score = 50.8 bits (116), Expect = 5e-05
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = +3
Query: 477 GRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQD-QCIR 653
G Q + + +++GTPG++ D ++ + +++V VLDEAD M+N +D Q I
Sbjct: 125 GPQFQQLERGAQVVVGTPGRLMDH-LRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWIL 183
Query: 654 IHKCLPSTCQMMFFSATYGTAVMQFAEIIVSNP 752
H +P T QM FSAT A+ + A + +P
Sbjct: 184 DH--IPKTAQMCLFSATMPPAIRKIANRFLKDP 214
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/87 (34%), Positives = 48/87 (55%)
Frame = +3
Query: 486 SQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKC 665
+ ++ +H+L+GTPG++ D ++ D+ + VLDEAD M+ G QD I K
Sbjct: 134 TNSLEHGAHVLVGTPGRVLDH-LEQRNVDLSMLTTLVLDEADRMLE-MGFQDSLNAIVKH 191
Query: 666 LPSTCQMMFFSATYGTAVMQFAEIIVS 746
+P T Q + FSATY + AE + +
Sbjct: 192 IPKTRQTLLFSATYPKNIAALAEQVTT 218
Score = 51.2 bits (117), Expect = 4e-05
Identities = 25/67 (37%), Positives = 39/67 (58%)
Frame = +1
Query: 280 IAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL 459
+ ++ +G+GKT AF L +L+++++ PQ L L PT ELA Q + K+AK IK+
Sbjct: 62 VVRADTGSGKTTAFALTLLAKLEAKSFSPQALVLCPTRELAHQVADEVRKLAKSMLNIKI 121
Query: 460 KYAVRGE 480
GE
Sbjct: 122 LTLCGGE 128
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 55.2 bits (127), Expect = 2e-06
Identities = 25/56 (44%), Positives = 39/56 (69%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 441
N++ Q+ +GTGKTAA++L +L R+ K QVL ++PT ELA+Q + AK+ K+
Sbjct: 41 NLVGQAPTGTGKTAAYLLPVLQRIQRGKK-AQVLIVTPTRELALQVADEVAKLGKY 95
Score = 43.2 bits (97), Expect = 0.010
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +3
Query: 480 RTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIH 659
R +G + +++GTPG++ D + F +IK+ +LDEAD M++ G D I
Sbjct: 111 RQIRGLRQGVEVIVGTPGRILDH-IGRKTFPAAEIKIVILDEADEMLD-MGFIDDIEAIL 168
Query: 660 KCLPSTCQMMFFSAT 704
L + Q + FSAT
Sbjct: 169 NTLTNRQQTLLFSAT 183
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 55.2 bits (127), Expect = 2e-06
Identities = 33/91 (36%), Positives = 48/91 (52%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K +H+++GTPG++ D K G FD +IK V+DEAD M N G DQ I K L
Sbjct: 120 KQKTHVVVGTPGRIIDHMEK-GTFDTSQIKYLVIDEADEMFN-MGFVDQIETIIKDLSKK 177
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNPL*SAFE 770
M SAT +A+ + + +P+ + E
Sbjct: 178 RVTMLLSATMPSAIETLSNRYMKDPIHAEIE 208
Score = 53.2 bits (122), Expect = 1e-05
Identities = 26/57 (45%), Positives = 38/57 (66%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 441
+++I +SQ+G+GKTAAF + + VD ++N PQ L L PT ELAIQ E + +F
Sbjct: 42 KDIIVKSQTGSGKTAAFAIPICQLVDWDENKPQALVLVPTRELAIQVKEDMFNIGRF 98
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 55.2 bits (127), Expect = 2e-06
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFC 444
++++A++++GTGKTAAFV+ L +V N Q L + PT ELA+QT +V + K C
Sbjct: 84 RDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC 141
Score = 50.4 bits (115), Expect = 7e-05
Identities = 27/73 (36%), Positives = 43/73 (58%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
HIL+GTPG++ D + + D+ +F++DEAD M++R + +I LP T Q +
Sbjct: 166 HILVGTPGRVLDLASR-KVADLSDCSLFIMDEADKMLSRD-FKTIIEQILSFLPPTHQSL 223
Query: 690 FFSATYGTAVMQF 728
FSAT+ V +F
Sbjct: 224 LFSATFPLTVKEF 236
Score = 39.1 bits (87), Expect = 0.17
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 155 TFEALHLKPNLLKGVYAMGFNAPSKIQETALP 250
TFE +LK LL G++ GF PS IQE A+P
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIP 78
>UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA
helicase - Bacillus halodurans
Length = 389
Score = 54.8 bits (126), Expect = 3e-06
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKM 432
QN+I SQ+GTGKT A++L ML++ + Q L L+PT ELA+Q EVA ++
Sbjct: 40 QNLIVHSQTGTGKTLAYLLPMLTKTEELPEQTQALILAPTQELAMQIVEVAKQL 93
Score = 39.9 bits (89), Expect = 0.098
Identities = 21/81 (25%), Positives = 43/81 (53%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K H+ +GTPG++ + ++ + +K+ V+DEAD M+ + + K + +
Sbjct: 119 KKKPHVAVGTPGRILEL-MEMKKLKVPHVKMIVVDEADRMMEETSAWNAFENVAKRIGNE 177
Query: 678 CQMMFFSATYGTAVMQFAEII 740
Q +F SAT+ + +F E++
Sbjct: 178 AQYLFVSATFAS---RFTELV 195
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 54.8 bits (126), Expect = 3e-06
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
+++I Q+Q+GTGKTAAF L +L R+D+ Q L L PT ELA+Q +AK
Sbjct: 43 RDVIGQAQTGTGKTAAFGLPLLQRIDAADRSVQALVLCPTRELALQVANGLTALAKHLRG 102
Query: 451 IKLKYAVRGEEL-PRGSKI 504
+++ G+ + P+ S +
Sbjct: 103 VRILSVYGGQPIEPQASAL 121
Score = 54.4 bits (125), Expect = 4e-06
Identities = 29/100 (29%), Positives = 53/100 (53%)
Frame = +3
Query: 486 SQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKC 665
+ + + +++GTPG++ D + G +G +++ VLDEAD M++ G ++ RI
Sbjct: 118 ASALRRGAQVVVGTPGRILDH-INRGTLQLGVVRMTVLDEADEMLD-MGFREDIERILSE 175
Query: 666 LPSTCQMMFFSATYGTAVMQFAEIIVSNPL*SAFERRRIT 785
+P Q FFSAT +++ A + P RR++T
Sbjct: 176 MPEWVQSAFFSATMPDGILELARRFLREPELLRVTRRQLT 215
Score = 35.5 bits (78), Expect = 2.1
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 146 SVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALP 250
SV++F+ L L+ LLK + +GF PS IQ A+P
Sbjct: 3 SVESFKDLPLEEELLKAIEELGFTEPSPIQSIAIP 37
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 54.8 bits (126), Expect = 3e-06
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKM 432
++IAQ++SGTGKT FV+ L RVD+ + Q L L+PT E A+QT E +M
Sbjct: 76 DVIAQAKSGTGKTMTFVVIALERVDAGRRRTQALALAPTRECAVQTHECFVEM 128
Score = 39.1 bits (87), Expect = 0.17
Identities = 22/81 (27%), Positives = 42/81 (51%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
H+++GTPG+ ++ G ++ +LDEAD +++ +D + + LP Q+
Sbjct: 166 HVVVGTPGRTRQM-LEEGSMACDGARLLILDEADALLSGTFERD-VLFAYSMLPERKQVC 223
Query: 690 FFSATYGTAVMQFAEIIVSNP 752
FSATY ++ E ++ P
Sbjct: 224 AFSATYSKTLLGDLERLMRAP 244
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 54.4 bits (125), Expect = 4e-06
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEV 420
++IAQSQSGTGKTA +V+A L R+D K Q + L+PT ELA Q +V
Sbjct: 60 DVIAQSQSGTGKTATYVIAALQRIDMMKEDTQAIILAPTRELANQIQKV 108
Score = 43.2 bits (97), Expect = 0.010
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +2
Query: 143 YSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETAL 247
YSV +FE + L NLL+G++A GF PS IQ+ A+
Sbjct: 18 YSVDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAI 52
Score = 42.3 bits (95), Expect = 0.018
Identities = 24/93 (25%), Positives = 45/93 (48%)
Frame = +3
Query: 582 IKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL*S 761
I++ VLDEAD M+ G +DQ I LP+ Q + SAT V++ ++ + +P+
Sbjct: 127 IRLLVLDEADQMLGN-GFKDQIHEIFCKLPTNVQAILLSATMPAHVLEATKMFMQDPVKI 185
Query: 762 AFERRRITGIT*NHIM*SAKVQKTNFRAICNIY 860
+R +T + ++ ++C +Y
Sbjct: 186 LIKREELTMEGIQQFYIKTETEEKKLESLCGLY 218
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 54.4 bits (125), Expect = 4e-06
Identities = 29/81 (35%), Positives = 47/81 (58%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
I++ TPG++ D +K G D+ ++ FVLDEAD M++ QD +HKC + Q +
Sbjct: 124 IIVATPGRLIDM-IKSGSIDISNVEFFVLDEADRMLDMGFIQDIRWLLHKC-KNRKQTLL 181
Query: 693 FSATYGTAVMQFAEIIVSNPL 755
+SAT VM+ A ++ P+
Sbjct: 182 YSATLSVEVMRLAYRFLNEPV 202
Score = 36.3 bits (80), Expect = 1.2
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 289 SQSGTGKTAAFVLAMLSRV-DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLKY 465
+Q+GTGKT AF++ ++ + L L+PT EL +Q E A K+ K I+
Sbjct: 45 AQTGTGKTVAFLIPVIHNILTKGIQGIAALVLAPTRELTMQIAEEAKKLLKHSEGIRSVP 104
Query: 466 AVRGEELPRGSK 501
+ G + +K
Sbjct: 105 IIGGTDYKSQNK 116
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 54.4 bits (125), Expect = 4e-06
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAA 426
++I Q+Q+GTGKTAAF L +L+ +D +K Q L L+PT ELA Q G+ A
Sbjct: 94 DLIGQAQTGTGKTAAFGLPLLNNIDFSKKCVQALVLAPTRELAQQVGDALA 144
Score = 52.8 bits (121), Expect = 1e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Frame = +3
Query: 492 GFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLP 671
G + + +++GTPG++ D ++ G + ++K VLDEAD M++ G D I P
Sbjct: 169 GLRRGARVVVGTPGRLLDL-IRQGSLKLDQLKTLVLDEADEMLS-MGFIDDIETILSQTP 226
Query: 672 STCQMMFFSATYGTAVMQFAEIIVSNP 752
Q M FSAT + VM A + +P
Sbjct: 227 KDRQTMLFSATLSSRVMSIANRYLHSP 253
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 54.4 bits (125), Expect = 4e-06
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI 453
++IAQ+ +G+GKTAAF L +L ++D Q L L PT ELA Q G+ K+A P +
Sbjct: 65 DVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNM 124
Query: 454 KLKYAVRGEELPRGSKI 504
KL G +P G ++
Sbjct: 125 KLVVLTGG--MPLGPQL 139
Score = 44.0 bits (99), Expect = 0.006
Identities = 24/82 (29%), Positives = 44/82 (53%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
H+++GTPG++ + K + +G ++ VLDEAD M++ G ++ I Q +
Sbjct: 148 HVVVGTPGRIQELARKRALH-LGGVRTLVLDEADRMLD-MGFEEPIREIASRCDKHRQSL 205
Query: 690 FFSATYGTAVMQFAEIIVSNPL 755
FSAT+ + A I+ +P+
Sbjct: 206 LFSATFPDIIRTLAREILKDPI 227
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 54.4 bits (125), Expect = 4e-06
Identities = 32/98 (32%), Positives = 55/98 (56%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
I+I TPG++ + V G+ + +++FVLDEAD M++ G + RIH LP Q +
Sbjct: 126 IVIATPGRVLEH-VDKGL-SLSHVEIFVLDEADRMLD-MGFMKEIRRIHPILPKRHQTLL 182
Query: 693 FSATYGTAVMQFAEIIVSNPL*SAFERRRITGIT*NHI 806
FSAT+ V + +++I++ P ++ T T N +
Sbjct: 183 FSATFSDKVRKLSKLILTKPAFIETSKKNSTVDTINQV 220
Score = 43.2 bits (97), Expect = 0.010
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRV----DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 441
++ A +Q+GTGKTAAF L ML R+ D + + L ++PT EL+IQ E AK
Sbjct: 40 DVFATAQTGTGKTAAFGLGMLQRLRKTSDDKQRALRGLVIAPTRELSIQIYEDLQSYAKN 99
Query: 442 CPEIKLKYAVRGEELPRGSKI 504
I + V G++L KI
Sbjct: 100 M-GINIAVLVGGKDLESQQKI 119
>UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Superfamily II DNA and RNA helicase -
Leuconostoc mesenteroides subsp. mesenteroides (strain
ATCC 8293 /NCDO 523)
Length = 431
Score = 54.4 bits (125), Expect = 4e-06
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +1
Query: 295 SGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVA 423
+GTGKT AFVL +LSR+D+N QVL L+P+ ELA+QT +VA
Sbjct: 39 TGTGKTLAFVLPVLSRIDTNLKRTQVLILAPSQELAMQTTQVA 81
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 54.4 bits (125), Expect = 4e-06
Identities = 32/89 (35%), Positives = 47/89 (52%)
Frame = +3
Query: 489 QGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 668
+ K H+ I TPG++ D + G D+ + K FVLDEAD M++ G I L
Sbjct: 114 RALKRGVHVAIATPGRLLDL-MDQGYVDLSQAKTFVLDEADRMLD-MGFMPALKTIVSKL 171
Query: 669 PSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
P Q +FF+AT V Q A +++NP+
Sbjct: 172 PKQRQTIFFTATMPPKVAQLASGLLNNPV 200
Score = 48.0 bits (109), Expect = 4e-04
Identities = 25/53 (47%), Positives = 38/53 (71%), Gaps = 5/53 (9%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKN-----YPQVLCLSPTYELAIQTGE 417
++I +Q+GTGKTAAF L +L+++D +++ PQVL LSPT ELA+Q +
Sbjct: 35 DLIGCAQTGTGKTAAFALPILNQLDLDRSRADACAPQVLVLSPTRELAVQIAQ 87
>UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase;
n=3; Cryptosporidium|Rep: Drs1p, eIF4a-1-family RNA SFII
helicase - Cryptosporidium parvum Iowa II
Length = 573
Score = 54.4 bits (125), Expect = 4e-06
Identities = 28/85 (32%), Positives = 47/85 (55%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K HI+I TPG++ D + + +++ +LDEAD +++ G + +C+ I K T
Sbjct: 163 KCQPHIVIATPGRILDMLLNTLSIQLELLEIIILDEADRLLD-MGFRQECLEILKYSSRT 221
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNP 752
Q M FSAT +V A + ++NP
Sbjct: 222 RQTMLFSATLSRSVTDLALLALNNP 246
Score = 36.7 bits (81), Expect = 0.91
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 16/99 (16%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAML-----------SRVDSNKNY-----PQVLCLSP 387
LA ++++A++++G+GKTAAF+L L SRV S +VL L P
Sbjct: 63 LALSGRDIMAEAETGSGKTAAFLLPALERLLRSPYVRNSRVSSLGRVGGAVGTKVLVLLP 122
Query: 388 TYELAIQTGEVAAKMAKFCPEIKLKYAVRGEELPRGSKI 504
+ ELA+Q V + K+CP I G + + +I
Sbjct: 123 SRELAMQCFGVLESLTKYCPVITRAVVTGGMNIQQQERI 161
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 54.0 bits (124), Expect = 6e-06
Identities = 25/57 (43%), Positives = 42/57 (73%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 441
+++IAQ+Q+GTGKTAAF + +L+ ++ NK+ + L ++PT ELA+Q E K+ +F
Sbjct: 83 KDLIAQAQTGTGKTAAFAIPILNTLNRNKDI-EALIITPTRELAMQISEEILKLGRF 138
Score = 43.2 bits (97), Expect = 0.010
Identities = 27/79 (34%), Positives = 42/79 (53%)
Frame = +3
Query: 516 LIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMFF 695
+I TPG++ D ++ G ++ VLDE+D M++ G D I K LP+T Q + F
Sbjct: 166 MIATPGRLLDH-LQNGRIAHFSPQIVVLDESDEMLD-MGFLDDIEEIFKFLPNTRQTLLF 223
Query: 696 SATYGTAVMQFAEIIVSNP 752
SAT + A I++ P
Sbjct: 224 SATMPEPIKALAMKILNEP 242
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 54.0 bits (124), Expect = 6e-06
Identities = 30/92 (32%), Positives = 50/92 (54%)
Frame = +3
Query: 477 GRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRI 656
GR + ++ + +++GTPG++ D + G + +K F+LDEAD M+ R G + I
Sbjct: 116 GRQLKQLRSGAQVVVGTPGRILD-HIDKGTLLLNNLKTFILDEADEML-RMGFIEDVETI 173
Query: 657 HKCLPSTCQMMFFSATYGTAVMQFAEIIVSNP 752
+ LP QM FSAT + Q A +++P
Sbjct: 174 LEKLPEKKQMALFSATMPYRIRQIANTYLNDP 205
Score = 52.8 bits (121), Expect = 1e-05
Identities = 29/77 (37%), Positives = 43/77 (55%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
++ IA +Q+GTGKTAAF L +L + + Q L L+PT ELAIQ E ++K+
Sbjct: 44 RDAIALAQTGTGKTAAFALPILQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRN 103
Query: 451 IKLKYAVRGEELPRGSK 501
+ + G+E R K
Sbjct: 104 VTIAVLCGGQEYGRQLK 120
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 54.0 bits (124), Expect = 6e-06
Identities = 28/74 (37%), Positives = 43/74 (58%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
+++ Q+Q+GTGKTAAF + + VD + N Q L L PT ELA+Q K++KF
Sbjct: 39 KDLTGQAQTGTGKTAAFGIPAIEHVDISINQTQSLILCPTRELALQVCTELKKLSKFKKG 98
Query: 451 IKLKYAVRGEELPR 492
+++ GE + R
Sbjct: 99 LRVLAVYGGESIER 112
Score = 50.4 bits (115), Expect = 7e-05
Identities = 31/102 (30%), Positives = 51/102 (50%)
Frame = +3
Query: 480 RTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIH 659
R + K +HI++GTPG++ D + + + +LDEAD M+N G ++ I
Sbjct: 112 RQIRDLKAGAHIVVGTPGRIIDH-LDRRTLNASHLSQIILDEADEMLN-MGFREDIELIL 169
Query: 660 KCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL*SAFERRRIT 785
LP Q + FSAT ++ A+ +NP ER+ +T
Sbjct: 170 TRLPEERQTVLFSATLAPPILALAKRFQNNPEIIKIERKELT 211
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 54.0 bits (124), Expect = 6e-06
Identities = 21/50 (42%), Positives = 37/50 (74%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEV 420
+N+I ++++GTGKT A++L ++ ++D +KN Q + LSPT+EL +Q V
Sbjct: 40 KNVIGKAETGTGKTLAYLLPIIEKIDDSKNEMQAIILSPTHELGVQINNV 89
Score = 41.1 bits (92), Expect = 0.042
Identities = 24/88 (27%), Positives = 42/88 (47%)
Frame = +3
Query: 480 RTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIH 659
R + KN HIL+GT G++ + + IK V+DE D +++ +D +
Sbjct: 114 RQMEKLKNKPHILVGTTGRILEL-INKKKITTNTIKTIVIDEGDKLLDFINIKDVKSVVK 172
Query: 660 KCLPSTCQMMFFSATYGTAVMQFAEIIV 743
C P Q + FSAT ++ A+ ++
Sbjct: 173 SC-PRDTQKLIFSATMNEKALETADELI 199
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 54.0 bits (124), Expect = 6e-06
Identities = 28/79 (35%), Positives = 48/79 (60%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
IL+ TPG++ D ++ G D+ ++++FVLDEAD+M++ G + +I K P Q +
Sbjct: 128 ILVATPGRLIDLQMQ-GNIDLSQLEIFVLDEADLMLD-MGFINDIKKIEKLCPRKKQTLL 185
Query: 693 FSATYGTAVMQFAEIIVSN 749
FSAT + + ++ IV N
Sbjct: 186 FSATIPEKIDELSKSIVKN 204
Score = 39.9 bits (89), Expect = 0.098
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLS----RVDSNKNYPQV--LCLSPTYELAIQTGEVAAKM 432
+N+I +Q+GTGKTAAF L +++ + D+ K ++ L ++PT ELAIQ E
Sbjct: 39 KNVIVAAQTGTGKTAAFALPIINLLFDKQDAEKGEKKIKALVITPTRELAIQILENFKSY 98
Query: 433 AKF 441
+K+
Sbjct: 99 SKY 101
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 54.0 bits (124), Expect = 6e-06
Identities = 28/89 (31%), Positives = 46/89 (51%)
Frame = +3
Query: 489 QGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 668
Q K+ I+I TPG+ D F++ +++ V+DEAD M+ +G QD+ I L
Sbjct: 348 QMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRML-EEGFQDELNEIMGLL 406
Query: 669 PSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
PS Q + FSAT + + + + P+
Sbjct: 407 PSNRQNLLFSATMNSKIKSLVSLSLKKPV 435
Score = 45.2 bits (102), Expect = 0.003
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRV---DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 441
+++IA + +G+GKTAAF++ ++ R+ + +V+ L PT ELAIQ +V ++A+F
Sbjct: 269 KDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARF 328
Query: 442 CPEIKLKYAVRGEEL 486
I AV G L
Sbjct: 329 VSGITFGLAVGGLNL 343
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 54.0 bits (124), Expect = 6e-06
Identities = 30/85 (35%), Positives = 47/85 (55%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K SHI++GTPG++ D ++ G + ++ V+DEAD M+N G +Q I K LP+
Sbjct: 118 KQKSHIVVGTPGRVLD-HIEKGTLPLDRLSYLVIDEADEMLN-MGFIEQVEAIIKHLPTE 175
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNP 752
M FSAT + + + + NP
Sbjct: 176 RTTMLFSATLPQDIEKLSRQYMQNP 200
Score = 49.2 bits (112), Expect = 2e-04
Identities = 21/57 (36%), Positives = 38/57 (66%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 441
++++ +SQ+G+GKTA+F + + + ++N PQ L L+PT ELA+Q E + +F
Sbjct: 40 KDLVVKSQTGSGKTASFGIPLCELANWDENKPQALILTPTRELAVQVKEDITNIGRF 96
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 53.6 bits (123), Expect = 7e-06
Identities = 25/45 (55%), Positives = 35/45 (77%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQ 408
++IAQ+QSGTGKTA FV+++L R+D++ Q L L+PT ELA Q
Sbjct: 69 DVIAQAQSGTGKTATFVISILQRIDTSLKETQALILAPTRELAQQ 113
Score = 39.5 bits (88), Expect = 0.13
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +2
Query: 149 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETAL 247
V F+ ++LK +LL+GVYA GF PS IQ+ A+
Sbjct: 29 VDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAI 61
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 53.6 bits (123), Expect = 7e-06
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAK 429
++++ QSQ+GTGKTAAF L +L R+D + Q + L+PT ELAIQ + A+
Sbjct: 41 RDVVGQSQTGTGKTAAFSLPILERLDPQQKAVQAIVLTPTRELAIQVHDAMAQ 93
Score = 49.2 bits (112), Expect = 2e-04
Identities = 30/96 (31%), Positives = 49/96 (51%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K HI++GTPG++ D ++ G + ++K FVLDEAD M++ G D +I P
Sbjct: 119 KRGVHIVVGTPGRVIDL-LERGNLKLDQVKWFVLDEADEMLS-MGFIDDVEKILSQAPQD 176
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNPL*SAFERRRIT 785
Q FSAT ++ + +P+ E+ + T
Sbjct: 177 RQTALFSATMPPSIRMLVNKFLRSPVTVTVEQPKAT 212
>UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=20; Bacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 436
Score = 53.6 bits (123), Expect = 7e-06
Identities = 25/59 (42%), Positives = 39/59 (66%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
++I QSQ+G+GKT A++L L+R++ + Q++ +PT ELA Q E K+ KFC E
Sbjct: 43 SVIGQSQTGSGKTHAYLLPTLNRINPGREEVQLVITAPTRELAQQIYEEIVKLTKFCAE 101
Score = 49.6 bits (113), Expect = 1e-04
Identities = 28/91 (30%), Positives = 48/91 (52%)
Frame = +3
Query: 480 RTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIH 659
R+ + K HI++GTPG++ D + +F + K ++DEAD+M++ G +I
Sbjct: 118 RSIEKLKKQPHIVVGTPGRIKDLVEEQALF-VHKANTIIVDEADLMLD-MGFIHDVDKIA 175
Query: 660 KCLPSTCQMMFFSATYGTAVMQFAEIIVSNP 752
+P QM+ FSAT + F + + NP
Sbjct: 176 ARMPKNLQMLVFSATIPQKLKPFLKKYMENP 206
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 53.6 bits (123), Expect = 7e-06
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
+++IAQ+++GTGKTAAF L +LS++ + QVL L PT EL Q + +A+ P
Sbjct: 42 KDLIAQAKTGTGKTAAFGLGVLSKLVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPN 101
Query: 451 IKL 459
IKL
Sbjct: 102 IKL 104
Score = 46.8 bits (106), Expect = 9e-04
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = +3
Query: 507 SHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQM 686
+HI++GTPG++ K + + ++ VLDEAD M++ G QD+ I Q
Sbjct: 124 AHIVVGTPGRILKHLNKSSL-SLDHVRTLVLDEADRMLD-MGFQDEIDAIIDQTNKQRQT 181
Query: 687 MFFSATYGTAVMQFAEIIVSNPL 755
+ FSATY + A+ ++ +PL
Sbjct: 182 LLFSATYPKKIATIAKRVMKDPL 204
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 53.6 bits (123), Expect = 7e-06
Identities = 29/91 (31%), Positives = 47/91 (51%)
Frame = +3
Query: 480 RTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIH 659
R + K H H+++GTPG++ D + G + + VLDEAD M+N G + I
Sbjct: 112 RQIRALKKHPHVIVGTPGRIID-HINRGTLRLEHVHTVVLDEADEMLN-MGFIEDIEAIL 169
Query: 660 KCLPSTCQMMFFSATYGTAVMQFAEIIVSNP 752
+P+ Q + FSAT + + AE ++ P
Sbjct: 170 SHVPAERQTLLFSATMPDPIRRIAERFMNEP 200
Score = 48.4 bits (110), Expect = 3e-04
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKM 432
+++I Q+Q+GTGKTAAF + ++ +V+ + Q L ++PT ELAIQ E K+
Sbjct: 40 KDVIGQAQTGTGKTAAFGIPIVEKVNVKNSAVQALVVAPTRELAIQVSEELYKI 93
>UniRef50_UPI0000D55FA1 Cluster: PREDICTED: similar to CG3561-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG3561-PA - Tribolium castaneum
Length = 446
Score = 53.2 bits (122), Expect = 1e-05
Identities = 33/116 (28%), Positives = 63/116 (54%), Gaps = 9/116 (7%)
Frame = +1
Query: 241 STSYTLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNK----NYPQVLCLSPTYELAIQ 408
+ +++L D ++++ +++G+GKT A++L ++ + +NK N PQ L L P ELA Q
Sbjct: 114 ANAFSLFDKNKHLLLAAETGSGKTIAYLLPIICNLITNKTPKLNTPQALILVPNRELAYQ 173
Query: 409 TGEVAAKMAKFCPEIKLKYAVRGEELPRGSKITVTFLLV-----LQERCLIGVSSL 561
GEVA +A+ +K+ R +++ + +L+ L + C +GV L
Sbjct: 174 VGEVAEALAESLLNVKIIVGGRTKKIMMNPEFGEVDILIGTPGALGKLCTVGVYKL 229
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 53.2 bits (122), Expect = 1e-05
Identities = 33/94 (35%), Positives = 48/94 (51%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
+LI TPG++ D + G + +KV V+DEAD M++ G RI +P T Q +F
Sbjct: 135 VLIATPGRLLDHFER-GKLILNDVKVMVVDEADRMLD-MGFIPDIERIFGLVPFTRQTLF 192
Query: 693 FSATYGTAVMQFAEIIVSNPL*SAFERRRITGIT 794
FSAT + + +SNP ER+ T T
Sbjct: 193 FSATMAPEIERITNTFLSNPEKIEVERQSTTSAT 226
Score = 39.9 bits (89), Expect = 0.098
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVL---AMLSRVDSNKNYPQVLCLSPTYELAIQTGE 417
++++ +Q+GTGKTA+F L ML+R + P+ L L PT ELA Q E
Sbjct: 49 RDVLGIAQTGTGKTASFTLPMITMLARGRARARMPRSLVLCPTRELAAQVAE 100
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 53.2 bits (122), Expect = 1e-05
Identities = 30/81 (37%), Positives = 46/81 (56%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
ILI TPG++ D ++ + ++V VLDEAD M+N G +++ I K LP Q +
Sbjct: 135 ILIATPGRLLDLVDSKAVY-LSDVEVLVLDEADKMLN-LGFKEEMANIFKLLPQKRQNLL 192
Query: 693 FSATYGTAVMQFAEIIVSNPL 755
FSAT G V E ++ +P+
Sbjct: 193 FSATLGKDVDTITEFLLHDPV 213
Score = 41.1 bits (92), Expect = 0.042
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDS---NKN-YPQVLCLSPTYELAIQTGEVAAKMAK 438
++++ +Q+G+GKTA+FVL +L + + KN + L L PT ELA+Q G+V +
Sbjct: 47 KDILGIAQTGSGKTASFVLPILQMLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSN 106
Query: 439 FCPEIKLKYAVRG 477
P AV G
Sbjct: 107 ALPNKIKSLAVYG 119
>UniRef50_Q4N4Z2 Cluster: ATP-dependent RNA helicase, putative; n=2;
Theileria|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 648
Score = 53.2 bits (122), Expect = 1e-05
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +3
Query: 501 NHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTC 680
N HIL GTPG++ + + IK+ ++DEAD +I+ G +D I I LP+
Sbjct: 141 NRLHILTGTPGRILALLSSQSLPETHNIKILIMDEADRLID-VGFRDDIISIVDFLPTDI 199
Query: 681 QMMFFSATYGTAVMQFAEIIVSN 749
Q +FFSAT +++ + ++++ +
Sbjct: 200 QFLFFSATIKSSLKELCDLLLKD 222
>UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase
Dbp45A; n=5; Endopterygota|Rep: Probable ATP-dependent
RNA helicase Dbp45A - Drosophila melanogaster (Fruit
fly)
Length = 521
Score = 53.2 bits (122), Expect = 1e-05
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Frame = +3
Query: 456 VKVCS*RGRT-----SQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMI 620
V+VC G T SQ HI++ PG++ D F +K V+DEAD M+
Sbjct: 104 VRVCVVSGGTDQMVESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRML 163
Query: 621 NRQGHQDQCIRIHKCLPSTCQMMFFSAT 704
N + I I +CLP T Q +FFSAT
Sbjct: 164 NGDFDESLSI-IERCLPKTRQNLFFSAT 190
Score = 39.5 bits (88), Expect = 0.13
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGE 417
Q+ I +++G+GKT AF L +L R+ L L+PT+ELA Q E
Sbjct: 45 QDCIGAAKTGSGKTFAFALPILERLSEEPVSHFALVLTPTHELAYQISE 93
>UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28;
Alphaproteobacteria|Rep: Cold-shock dead-box protein A -
Bradyrhizobium japonicum
Length = 650
Score = 52.8 bits (121), Expect = 1e-05
Identities = 27/76 (35%), Positives = 47/76 (61%)
Frame = +3
Query: 507 SHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQM 686
+HI++GTPG++ D ++ G D+ ++K VLDEAD M+N G ++ I + P T +
Sbjct: 124 AHIVVGTPGRLCDH-LRRGRLDISELKAVVLDEADEMLN-LGFREDMEFILETTPETRRT 181
Query: 687 MFFSATYGTAVMQFAE 734
+ FSAT+ ++ A+
Sbjct: 182 LLFSATFPRGIVALAK 197
>UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=1;
Mycoplasma mobile|Rep: DEAD-box ATP-dependent RNA
helicase - Mycoplasma mobile
Length = 557
Score = 52.8 bits (121), Expect = 1e-05
Identities = 29/80 (36%), Positives = 43/80 (53%)
Frame = +3
Query: 495 FKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPS 674
FK I++ TPG++ D+ +K G + ++ VLDEAD+M++ G D I K
Sbjct: 122 FKRGLDIIVATPGRLLDY-IKSGKLSLSQVDTVVLDEADLMVD-MGFIDDVKEILKRTKE 179
Query: 675 TCQMMFFSATYGTAVMQFAE 734
Q+M FSAT A+M E
Sbjct: 180 EKQVMLFSATMPKAIMNLVE 199
Score = 40.3 bits (90), Expect = 0.074
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 5/58 (8%)
Frame = +1
Query: 259 ADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSN-----KNYPQVLCLSPTYELAIQTGE 417
A+ QN++ +Q+GTGKTAAF +++++++ N K+ L L PT EL++Q E
Sbjct: 35 ANKNQNILGCAQTGTGKTAAFGVSIINKILKNKKNNAKSSLTTLILVPTRELSVQVNE 92
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 52.8 bits (121), Expect = 1e-05
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
Q++I +S +GTGKT AF++ +L ++++ PQ + L PT+ELA Q E K A +
Sbjct: 39 QDIIGKSHTGTGKTVAFIVPILQNLNTHLKQPQAIILCPTHELASQIIEQVRKFATYLEG 98
Query: 451 IKLKYAVRGEELPR 492
+ G + R
Sbjct: 99 VNATLICGGSHIQR 112
Score = 50.4 bits (115), Expect = 7e-05
Identities = 28/83 (33%), Positives = 47/83 (56%)
Frame = +3
Query: 507 SHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQM 686
S+I++GTPG++ D + + KIK VLDEAD M+ + G + ++ + P+ Q
Sbjct: 120 SNIIVGTPGRIADH-INRKTLRLDKIKTIVLDEADEML-KMGFKTDLDKVFQNAPNKYQT 177
Query: 687 MFFSATYGTAVMQFAEIIVSNPL 755
+ FSAT V++ A +NP+
Sbjct: 178 LLFSATMPKQVLEIANNYQTNPV 200
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 52.8 bits (121), Expect = 1e-05
Identities = 30/81 (37%), Positives = 46/81 (56%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
IL+ TPG+MFD + + ++K+ VLDEAD M++ G + K LP+ Q +F
Sbjct: 126 ILVATPGRMFDL-IYQKHIKITRVKILVLDEADHMLDL-GFIKDIQDVKKFLPARHQTLF 183
Query: 693 FSATYGTAVMQFAEIIVSNPL 755
FSAT + + A +V NP+
Sbjct: 184 FSATINEEIKKLAYSLVKNPI 204
Score = 44.4 bits (100), Expect = 0.005
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNK--NYPQVLCL--SPTYELAIQTGEVAAKMAK 438
++++A +Q+GTGKTAAFV+ +L+ + + K + + CL +PT ELA+Q EV K+
Sbjct: 39 EDVLAIAQTGTGKTAAFVIPVLNTLINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGA 98
Query: 439 F 441
+
Sbjct: 99 Y 99
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 52.8 bits (121), Expect = 1e-05
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQ 408
N+I Q+Q+GTGKTAAF + ++ R+D N Q L L+PT ELA+Q
Sbjct: 42 NVIGQAQTGTGKTAAFGIPLIERLDEKANDVQALVLTPTRELALQ 86
Score = 42.7 bits (96), Expect = 0.014
Identities = 27/91 (29%), Positives = 46/91 (50%)
Frame = +3
Query: 477 GRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRI 656
G + K +++GTPG++ D + G D+ KIK V+DEAD M++ +D + +
Sbjct: 112 GNQIRALKRRVDLVVGTPGRIIDH-LNRGTLDITKIKYLVIDEADEMLDMGFIEDVEMIL 170
Query: 657 HKCLPSTCQMMFFSATYGTAVMQFAEIIVSN 749
K Q++ FSAT ++ A + N
Sbjct: 171 SKTNKEK-QILMFSATMPQRIVTLARKHMGN 200
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 52.8 bits (121), Expect = 1e-05
Identities = 30/81 (37%), Positives = 46/81 (56%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
ILI TPG++ D + F++G ++V VLDEAD M++ G RI + +P Q +F
Sbjct: 128 ILIATPGRLLDL-IDQKAFNLGSVEVLVLDEADQMLD-LGFVHALRRISQLVPKERQTLF 185
Query: 693 FSATYGTAVMQFAEIIVSNPL 755
FSAT A+ + +NP+
Sbjct: 186 FSATMPKAIKELVSGYCNNPV 206
Score = 34.7 bits (76), Expect = 3.7
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 5/51 (9%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRV-DSNKNYP----QVLCLSPTYELAIQ 408
++++ +Q+GTGKTAAF+L + R+ +++ P ++L L+PT EL Q
Sbjct: 40 RDLLGIAQTGTGKTAAFMLPSIDRLREADNRIPFKSCRMLVLAPTRELVSQ 90
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 52.8 bits (121), Expect = 1e-05
Identities = 30/81 (37%), Positives = 44/81 (54%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
I+ GTPG++FD + G I+ VLDEAD M++ G DQ +RI K LP +
Sbjct: 124 IVTGTPGRVFDH-ISHGTLSTKNIRFLVLDEADRMLD-MGFLDQVVRIVKTLPKERITLL 181
Query: 693 FSATYGTAVMQFAEIIVSNPL 755
FSAT + + ++NP+
Sbjct: 182 FSATMPPEIHNICKRYMNNPV 202
Score = 46.4 bits (105), Expect = 0.001
Identities = 22/57 (38%), Positives = 36/57 (63%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 441
+++I S++G+GKTA F +++L + + PQ L L+P ELA+Q KMAK+
Sbjct: 41 EDLIVMSKTGSGKTAVFGVSILQLTNPEEAGPQGLILTPARELAVQVDNDIRKMAKY 97
>UniRef50_Q5BXN2 Cluster: SJCHGC07723 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07723 protein - Schistosoma
japonicum (Blood fluke)
Length = 167
Score = 52.8 bits (121), Expect = 1e-05
Identities = 26/68 (38%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRV-----DSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 438
++ A +++G+GKT AF+L +L R+ D N + L +SPT ELA+Q VA K+ K
Sbjct: 99 DICACARTGSGKTLAFLLPILERLAKKPSDFNHAITRALVISPTRELAVQIFNVAEKLVK 158
Query: 439 FCPEIKLK 462
+CP+++++
Sbjct: 159 YCPKLRIQ 166
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 52.8 bits (121), Expect = 1e-05
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPS--TCQ 683
HI++GTPG++ + + M IK+FV+DEAD M+ + G Q+Q I + + + Q
Sbjct: 158 HIVVGTPGRV-EHMININELSMDNIKLFVIDEADEML-KAGFQEQVKSIFRRITNKDEVQ 215
Query: 684 MMFFSATYGTAVMQFAEIIVSNPL 755
+ FSATY ++ +E I+ NP+
Sbjct: 216 IAMFSATYDEEELRVSEEILINPV 239
Score = 44.0 bits (99), Expect = 0.006
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +1
Query: 283 AQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQ 408
AQ+QSGTGKT AF +A L D +++ Q+L L+ T E+A Q
Sbjct: 80 AQAQSGTGKTGAFAVAALQICDMSQDVTQILVLASTREIAAQ 121
Score = 38.3 bits (85), Expect = 0.30
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +2
Query: 104 DIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETAL 247
+ E R D +S + T+E LK +LLKG+Y++GF PS IQ+ A+
Sbjct: 23 EFEDLRSD-SSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAI 69
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/56 (41%), Positives = 36/56 (64%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 438
++++ +Q+G+GKTAAF L +L +D PQ+L L+PT ELA+Q E +K
Sbjct: 44 RDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSK 99
Score = 47.6 bits (108), Expect = 5e-04
Identities = 28/80 (35%), Positives = 41/80 (51%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
I++GTPG++ D +K G D+ K+ VLDEAD M+ R G + I +P Q
Sbjct: 128 IVVGTPGRLLDH-LKRGTLDLSKLSGLVLDEADEML-RMGFIEDVETIMAQIPEGHQTAL 185
Query: 693 FSATYGTAVMQFAEIIVSNP 752
FSAT A+ + + P
Sbjct: 186 FSATMPEAIRRITRRFMKEP 205
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 52.4 bits (120), Expect = 2e-05
Identities = 30/85 (35%), Positives = 47/85 (55%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K +HI++GTPG++ D ++ G + ++K V+DEAD M+N G DQ I LP+
Sbjct: 120 KQKTHIVVGTPGRVLD-HIEKGTLSLERLKYLVIDEADEMLN-MGFIDQVEAIIDELPTK 177
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNP 752
M FSAT V + + ++ P
Sbjct: 178 RMTMLFSATLPEDVERLSRTYMNAP 202
Score = 51.2 bits (117), Expect = 4e-05
Identities = 22/57 (38%), Positives = 38/57 (66%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 441
++++ +SQ+G+GKTA+F + + V+ +N PQ L L+PT ELA+Q E + +F
Sbjct: 42 KDLVVKSQTGSGKTASFGIPLCEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRF 98
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 52.4 bits (120), Expect = 2e-05
Identities = 29/85 (34%), Positives = 49/85 (57%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K + HI+IGTPG++ D + G+ D+ K+K ++DEAD M+ R G + I + +P+
Sbjct: 124 KKNPHIIIGTPGRLLD-HLSRGL-DISKLKTLIIDEADEML-RMGFIEDIEHIIRYVPTH 180
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNP 752
Q FSAT ++ + + + NP
Sbjct: 181 RQTALFSATLPVSIRKLSYKFMCNP 205
Score = 48.4 bits (110), Expect = 3e-04
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 438
+++ + +G+GKTAAF+L +L +D + + Q L + PT ELAIQ G V K
Sbjct: 45 DLLGMAHTGSGKTAAFLLPLLQNIDIKQRFVQGLIIVPTRELAIQIGHVCMYFIK 99
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 52.4 bits (120), Expect = 2e-05
Identities = 26/61 (42%), Positives = 35/61 (57%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 435
L ++I Q+Q+GTGKTAAF L ++ +++ PQ L L PT ELAIQ E
Sbjct: 36 LLSQDHDIIGQAQTGTGKTAAFGLPIVQKIEPGLKKPQALILCPTRELAIQVNEEIKSFC 95
Query: 436 K 438
K
Sbjct: 96 K 96
Score = 45.2 bits (102), Expect = 0.003
Identities = 30/123 (24%), Positives = 59/123 (47%)
Frame = +3
Query: 489 QGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 668
+ K +++ TPG+ + ++ G ++ ++ VLDEAD M+N G + ++ K
Sbjct: 116 RALKKGVDLVVATPGRCIHF-IEDGKLELDSLEYLVLDEADEMLN-MGFVEDVEKVLKAS 173
Query: 669 PSTCQMMFFSATYGTAVMQFAEIIVSNPL*SAFERRRITGIT*NHIM*SAKVQKTNFRAI 848
P ++ FSAT + + AE + N + + +T T + ++ A + F A+
Sbjct: 174 PDDRTVLMFSATMPPRLKKIAESYMHNSITIKAKSETMTMETIDQVVYEA-YPENKFAAL 232
Query: 849 CNI 857
C I
Sbjct: 233 CRI 235
>UniRef50_A2E7Z7 Cluster: Helicase conserved C-terminal domain
containing protein; n=1; Trichomonas vaginalis G3|Rep:
Helicase conserved C-terminal domain containing protein
- Trichomonas vaginalis G3
Length = 528
Score = 52.4 bits (120), Expect = 2e-05
Identities = 24/53 (45%), Positives = 34/53 (64%)
Frame = +1
Query: 250 YTLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQ 408
Y L +PP++++AQ+ +G GKT AF+L M RVD Q +C+ PT EL Q
Sbjct: 92 YLLENPPKSILAQASTGEGKTLAFILPMYLRVDLENPNIQAICVCPTRELIQQ 144
Score = 47.6 bits (108), Expect = 5e-04
Identities = 28/83 (33%), Positives = 42/83 (50%)
Frame = +3
Query: 507 SHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQM 686
+ ++IGTP ++ K + +K+ V DEAD + N + H+ RI +P T Q+
Sbjct: 203 AQVIIGTPSQIS----KLPRDTLRSVKICVFDEADNIFNSEQHKHYAQRIINNIPDTSQV 258
Query: 687 MFFSATYGTAVMQFAEIIVSNPL 755
FFSATY V E +S L
Sbjct: 259 AFFSATYPKQVKIHLEHYISRDL 281
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 52.4 bits (120), Expect = 2e-05
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGE 417
L + ++++ Q+Q+GTGKTAAF + +L +D + Q L L+PT ELAIQ E
Sbjct: 36 LIEGKRDIVGQAQTGTGKTAAFGIPILETIDESSRNTQALILAPTRELAIQVAE 89
Score = 43.6 bits (98), Expect = 0.008
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
I++GTPG++ D + + + VLDEAD M+N G D I K + + +M+
Sbjct: 124 IVVGTPGRILD-HISRRTIKLENVSYVVLDEADEMLN-MGFIDDVEEILKSVSTEKRMLL 181
Query: 693 FSATYGTAVMQFAE 734
FSAT ++M+ A+
Sbjct: 182 FSATLPDSIMKLAK 195
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 52.0 bits (119), Expect = 2e-05
Identities = 28/86 (32%), Positives = 51/86 (59%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K + ++IGTPG++ D + G + +I + VLDE D M++ G ++Q I+K LP
Sbjct: 117 KKNPKVIIGTPGRIIDH-LNRGSLKIDRIGITVLDEMDRMLD-MGMKEQLEEINKFLPEK 174
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNPL 755
Q++ FSAT ++ ++ ++NP+
Sbjct: 175 RQVLMFSATMPKHIIAVSQKYLNNPV 200
Score = 38.7 bits (86), Expect = 0.23
Identities = 26/82 (31%), Positives = 41/82 (50%)
Frame = +1
Query: 247 SYTLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAA 426
S +A +++A SQ+G+GKT A++L ++ NK L L PT ELA Q
Sbjct: 33 SIPVAMAGSDILASSQTGSGKTLAYLLPLIDSFIKNKT--TALILVPTRELATQIHSTLN 90
Query: 427 KMAKFCPEIKLKYAVRGEELPR 492
K+ +I + GE +P+
Sbjct: 91 KVTT-SYKINSAVLIGGEPMPK 111
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 52.0 bits (119), Expect = 2e-05
Identities = 26/93 (27%), Positives = 52/93 (55%)
Frame = +3
Query: 477 GRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRI 656
G+ + + ++ TPG+ D+ ++ G+ D+ +++V VLDEAD M++ G +++ +
Sbjct: 111 GKQKEALLRGADAVVATPGRALDY-LRQGVLDLSRVEVAVLDEADEMLS-MGFEEEVEAL 168
Query: 657 HKCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
P + Q + FSAT + + AE + NP+
Sbjct: 169 LSATPPSRQTLLFSATLPSWAKRLAERYMKNPV 201
Score = 44.4 bits (100), Expect = 0.005
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNK---NYPQVLCLSPTYELAIQTGEVAA 426
LA +++I Q+++GTGKT AF L + R+ ++ P+ L L+PT ELA+Q VA+
Sbjct: 34 LALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLTPTRELALQ---VAS 90
Query: 427 KMAKFCPEIKL 459
++ P +K+
Sbjct: 91 ELTAVAPHLKV 101
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 52.0 bits (119), Expect = 2e-05
Identities = 23/61 (37%), Positives = 44/61 (72%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
++++A++++GTGKT +F++ +L V+ K++ Q L L T ELA+QT +VA ++K P+
Sbjct: 59 RDVVARAKNGTGKTGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPD 118
Query: 451 I 453
+
Sbjct: 119 V 119
Score = 33.9 bits (74), Expect = 6.4
Identities = 18/80 (22%), Positives = 42/80 (52%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
+++ TPG++ + + + + VLDEAD+++++ + + C Q +F
Sbjct: 145 VVLATPGRLQQL-IDEEILNFRDCSIVVLDEADMLLSQNFIRSIENCLAACSNKRRQTLF 203
Query: 693 FSATYGTAVMQFAEIIVSNP 752
FSAT+ ++ +F + + +P
Sbjct: 204 FSATFSNSLKEFCDKHLRDP 223
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 52.0 bits (119), Expect = 2e-05
Identities = 29/92 (31%), Positives = 47/92 (51%)
Frame = +3
Query: 477 GRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRI 656
GR + K + +I++GTPG++ D + + + V+DEAD M+N G D I
Sbjct: 112 GRQIRALKKNPNIIVGTPGRLLD-HINRRTIRLNNVNTVVMDEADEMLN-MGFIDDIESI 169
Query: 657 HKCLPSTCQMMFFSATYGTAVMQFAEIIVSNP 752
+PS Q + FSAT + + AE ++ P
Sbjct: 170 LSNVPSEHQTLLFSATMPAPIKRIAERFMTEP 201
Score = 47.2 bits (107), Expect = 6e-04
Identities = 21/56 (37%), Positives = 37/56 (66%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 438
+++I Q+Q+GTGKTAAF + ++ +++ Q + ++PT ELAIQ E K+ +
Sbjct: 41 KDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQ 96
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 51.6 bits (118), Expect = 3e-05
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVD--SNKNYPQVLCLSPTYELAIQTGEVAAKMAK 438
++I Q+Q+GTGKTAAF A+++ D K P+ L L+PT ELAIQ E ++ K
Sbjct: 43 DIIGQAQTGTGKTAAFGCAIINNADFSGKKKSPKALILAPTRELAIQVNEELVRLGK 99
Score = 45.2 bits (102), Expect = 0.003
Identities = 29/84 (34%), Positives = 42/84 (50%)
Frame = +3
Query: 480 RTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIH 659
R + KN I++GTPG++ D ++ + I VLDEAD M+N G D I
Sbjct: 116 RQIRALKNGVDIVVGTPGRVLDL-IRRKSLPLNDIGFLVLDEADEMLN-MGFIDDLEEIV 173
Query: 660 KCLPSTCQMMFFSATYGTAVMQFA 731
K L + Q + FSAT + + A
Sbjct: 174 KSLKTDRQTLLFSATMPPQIKKLA 197
Score = 33.9 bits (74), Expect = 6.4
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 158 FEALHLKPNLLKGVYAMGFNAPSKIQETALP 250
F+ L LK +LLK + MGF PS+IQ ++P
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIP 36
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 51.6 bits (118), Expect = 3e-05
Identities = 26/85 (30%), Positives = 48/85 (56%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K+ +L+ TPG++ D+ + D+ ++ +LDEAD M++ G D + I +CL +
Sbjct: 131 KHGVQVLVATPGRLIDF-IYSRQIDLSHVETLILDEADEMLS-MGFYDDLVFIIQCLNHS 188
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNP 752
Q + FSAT A+ + A+ + +P
Sbjct: 189 HQTLLFSATMPAAIQRLAKHHMKDP 213
Score = 44.8 bits (101), Expect = 0.003
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 435
L Q++IA SQ+G+GKTA + + +RV++ Q L + PT ELA+Q K+
Sbjct: 48 LIQKKQDLIALSQTGSGKTATCAIPICNRVNTELTDIQALIIVPTRELALQYATETQKIG 107
Query: 436 KF 441
K+
Sbjct: 108 KY 109
Score = 33.5 bits (73), Expect = 8.5
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +2
Query: 89 VESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALP 250
++ ++D+E+ ++PN F +L P +LK + M F PS+IQ A+P
Sbjct: 1 MQEQIDVELLPQEPNG-------FITFNLDPLILKALDKMNFKEPSRIQTEAIP 47
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 51.6 bits (118), Expect = 3e-05
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
ILI TPG++ D V+ ++G++++ VLDEAD M++ G RI LP Q +
Sbjct: 140 ILIATPGRLLDH-VQQKTANLGQVQILVLDEADRMLD-MGFLPDLQRILNLLPKERQTLL 197
Query: 693 FSATYGTAVMQFAEIIVSNP 752
FSAT+ + + A + NP
Sbjct: 198 FSATFSPEIKKLASTYLRNP 217
Score = 33.9 bits (74), Expect = 6.4
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKN-------YP-QVLCLSPTYELAIQTGEVAA 426
++++ +Q+GTGKTA+F L ++ R+ N +P + L L+PT ELA Q VAA
Sbjct: 49 RDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQ---VAA 105
Query: 427 KMAKFCPEIKLKYAV 471
+ + L+ AV
Sbjct: 106 NVHAYAKHTPLRSAV 120
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 51.6 bits (118), Expect = 3e-05
Identities = 31/93 (33%), Positives = 49/93 (52%)
Frame = +3
Query: 477 GRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRI 656
GR + + IL+ TPG++ D + + ++VFVLDEAD M++ G RI
Sbjct: 120 GRQMRMLDRGTDILVATPGRLLDL-IDQRALVLKDVEVFVLDEADQMLDL-GFIHALRRI 177
Query: 657 HKCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
K LP Q +FFSAT + + + +S+P+
Sbjct: 178 DKLLPKNRQTLFFSATMPKTIQELSSQFLSDPV 210
Score = 33.9 bits (74), Expect = 6.4
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Frame = +1
Query: 289 SQSGTGKTAAFVLAMLSRVDSN-KNYPQ----VLCLSPTYELAIQ 408
+Q+GTGKTAAF L + + +N + PQ +L LSPT ELA Q
Sbjct: 50 AQTGTGKTAAFALPSIHYLATNPQARPQRGCRMLILSPTRELASQ 94
>UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1;
Salinibacter ruber DSM 13855|Rep: ATP-dependent RNA
helicase - Salinibacter ruber (strain DSM 13855)
Length = 478
Score = 51.6 bits (118), Expect = 3e-05
Identities = 32/79 (40%), Positives = 44/79 (55%)
Frame = +1
Query: 235 RNSTSYTLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTG 414
R + YTL +++I QSQ+G+GKT AF+L + V+ +K QVL L+PT ELA Q
Sbjct: 69 RKAIPYTLDG--RDLIVQSQTGSGKTGAFLLPLFDLVNPDKEEQQVLILTPTRELARQIH 126
Query: 415 EVAAKMAKFCPEIKLKYAV 471
E +M P AV
Sbjct: 127 EEFEQMKIATPRTNRMEAV 145
Score = 46.0 bits (104), Expect = 0.001
Identities = 28/87 (32%), Positives = 44/87 (50%)
Frame = +3
Query: 492 GFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLP 671
G KN + ++IGTPG++ D +K FD +++ VLDEAD M++ G I + +P
Sbjct: 159 GLKNGAQVVIGTPGRILD-HIKKDNFDASTLRMLVLDEADEMLS-MGFYPDMKDIVEHVP 216
Query: 672 STCQMMFFSATYGTAVMQFAEIIVSNP 752
+SAT V A + +P
Sbjct: 217 GDRVSYMYSATMPPKVRSVAREFLDDP 243
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 51.6 bits (118), Expect = 3e-05
Identities = 26/71 (36%), Positives = 40/71 (56%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
++++ +Q+GTGKTAAF L +L+R + PQVL L+PT ELA Q +K
Sbjct: 44 KDVLGLAQTGTGKTAAFTLPLLARTQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESN 103
Query: 451 IKLKYAVRGEE 483
+K+ G +
Sbjct: 104 VKVASIYGGSD 114
Score = 41.5 bits (93), Expect = 0.032
Identities = 28/92 (30%), Positives = 43/92 (46%)
Frame = +3
Query: 477 GRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRI 656
G + K ++GTPG++ D ++ G + I+ VLDEAD M+ R G D +
Sbjct: 116 GSQFRALKQGPQWVVGTPGRVMDH-IRRGTLKLEGIRAVVLDEADEML-RMGFIDDVDWV 173
Query: 657 HKCLPSTCQMMFFSATYGTAVMQFAEIIVSNP 752
+P Q+ FSAT + AE + P
Sbjct: 174 LDQVPEKRQIALFSATMPKQIKAVAEKHLREP 205
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 51.6 bits (118), Expect = 3e-05
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKN-YPQVLCLSPTYELAIQTGEVAAKMAKFCP 447
+++IAQ+Q+GTGKTAAF + +L R+D N + + + ++PT ELA+Q E K K
Sbjct: 57 KDLIAQAQTGTGKTAAFGIPLLERIDFKANKFVKAIIVTPTRELALQIFE-ELKSLKGTK 115
Query: 448 EIKLKYAVRGEELPRGSK 501
+K+ G+ L + K
Sbjct: 116 RVKITTLYGGQSLEKQFK 133
Score = 38.7 bits (86), Expect = 0.23
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
I++GTPG++ D + D+ ++ VLDEAD M++ G D + I K +
Sbjct: 141 IVVGTPGRIIDH-LNRDTLDLSHVEYLVLDEADRMLD-MGFLDDVLEIIKRTGENKRTFL 198
Query: 693 FSATYGTAVMQFA 731
FSAT ++ A
Sbjct: 199 FSATMPKEIVDIA 211
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 51.6 bits (118), Expect = 3e-05
Identities = 23/56 (41%), Positives = 36/56 (64%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 438
+++I +S++GTGKTAAF + +L R+ + P L + PT ELAIQ + +AK
Sbjct: 58 KDVIVRSKTGTGKTAAFAIPILERIADGRRRPSALVMCPTRELAIQVAQEFTALAK 113
Score = 51.2 bits (117), Expect = 4e-05
Identities = 29/92 (31%), Positives = 48/92 (52%)
Frame = +3
Query: 477 GRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRI 656
G Q + + I++GTPG+++D ++ + + V LDEAD M+N G ++ RI
Sbjct: 129 GEQLQKLEAGAEIIVGTPGRIYDH-IRRRTLKLDETMVCCLDEADEMLN-MGFFEEVTRI 186
Query: 657 HKCLPSTCQMMFFSATYGTAVMQFAEIIVSNP 752
LP CQ + FSAT + Q +++P
Sbjct: 187 LDNLPKDCQQLLFSATVPADIEQIIRDYLTDP 218
>UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3;
Ostreococcus|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1025
Score = 51.6 bits (118), Expect = 3e-05
Identities = 28/73 (38%), Positives = 44/73 (60%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
I+IGTPG++ D + G+ + K+ V VLDEAD M++ G + Q I P++ Q +
Sbjct: 169 IVIGTPGRLTDLMSQEGVLSLEKLSVIVLDEADRMLD-MGFEPQIKTIFGATPASRQTLL 227
Query: 693 FSATYGTAVMQFA 731
FSAT+ +V + A
Sbjct: 228 FSATWPKSVRKLA 240
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 51.6 bits (118), Expect = 3e-05
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI 453
++I QS+SGTGKT +V+A++ + N N P + + PT ELAIQ + + K +
Sbjct: 64 DLIIQSKSGTGKTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDF 123
Query: 454 KLKYAVRGEELPRGSKI---------TVTFLLVLQERCLIGVSSLACLIWVKLKFLC*TK 606
K + G ++ + K T LL L E + VS L L+ + L TK
Sbjct: 124 KCSAFIGGTDVAKDRKRMNESRVIIGTPGRLLHLYENRVFDVSKLRLLVLDEADQLYQTK 183
Query: 607 QMS*SIDKGIK 639
+ ++ K I+
Sbjct: 184 SLQHTVSKLIE 194
Score = 48.0 bits (109), Expect = 4e-04
Identities = 24/85 (28%), Positives = 47/85 (55%)
Frame = +3
Query: 501 NHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTC 680
N S ++IGTPG++ + +FD+ K+++ VLDEAD + + Q ++ + +P
Sbjct: 142 NESRVIIGTPGRLLHL-YENRVFDVSKLRLLVLDEADQLYQTKSLQHTVSKLIEAMPKNR 200
Query: 681 QMMFFSATYGTAVMQFAEIIVSNPL 755
Q++ SATY + + ++ P+
Sbjct: 201 QIIACSATYDQNLDERLAKVMDKPM 225
Score = 36.7 bits (81), Expect = 0.91
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +2
Query: 149 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALP 250
VKTFE L L NLL G+ F P+KIQ A+P
Sbjct: 24 VKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIP 57
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 51.6 bits (118), Expect = 3e-05
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQT 411
++ IAQ+QSGTGKTA F +A L +D++ + Q L L+PT ELA QT
Sbjct: 72 KDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQALILAPTRELAQQT 118
Score = 51.6 bits (118), Expect = 3e-05
Identities = 27/80 (33%), Positives = 47/80 (58%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
+++GTPG++ D K + +K+F+LDEAD M+ R G +DQ +I + LP Q+
Sbjct: 222 VVVGTPGRVLDLIQKKTLVT-DHLKLFILDEADEMLGR-GFKDQINKIFQNLPHDIQVAL 279
Query: 693 FSATYGTAVMQFAEIIVSNP 752
FSAT +++ + + +P
Sbjct: 280 FSATMAPEILEITKQFMRDP 299
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 51.6 bits (118), Expect = 3e-05
Identities = 29/89 (32%), Positives = 49/89 (55%)
Frame = +3
Query: 489 QGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 668
+ KN S+++I TPG+ D + F++ K+ V+DEAD M + G + Q IRI + +
Sbjct: 218 RAIKNGSNVIIATPGRFIDL-LSSSAFNIKKVSYLVIDEADRMFDL-GFEPQVIRIAERM 275
Query: 669 PSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
Q + FSAT+ V + A ++ N +
Sbjct: 276 RKDRQTLMFSATFPHTVERIARKLLQNSI 304
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 51.6 bits (118), Expect = 3e-05
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 441
++++AQ+QSGTGKT F + L R+D N+ QV+ L+P ELA Q +V + ++
Sbjct: 94 KDVLAQAQSGTGKTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQY 150
Score = 51.2 bits (117), Expect = 4e-05
Identities = 28/84 (33%), Positives = 47/84 (55%)
Frame = +3
Query: 483 TSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHK 662
T + K HI+I TPG++ D +K D +++ V+DEAD M++ QG D I K
Sbjct: 167 TREKCKQGVHIIIATPGRLIDM-MKNKYLDATFMRLLVVDEADQMLD-QGFSDNFAEILK 224
Query: 663 CLPSTCQMMFFSATYGTAVMQFAE 734
+P Q+ FSAT+ +++ ++
Sbjct: 225 MVPGDIQIALFSATFPQEIIELSK 248
Score = 37.9 bits (84), Expect = 0.39
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +2
Query: 149 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETAL 247
V+TFE L L +LL+G+++ GF PS IQ+ A+
Sbjct: 55 VETFEDLTLSKDLLRGIFSYGFERPSAIQQKAI 87
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 51.6 bits (118), Expect = 3e-05
Identities = 32/92 (34%), Positives = 48/92 (52%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
HI++GTPG++ + ++ I++ VLDEAD M++ G D+ +I K LP Q +
Sbjct: 122 HIVVGTPGRLLE-HMRREYVRTSDIRIAVLDEADKMLD-MGFIDEAEKILKKLPERRQTL 179
Query: 690 FFSATYGTAVMQFAEIIVSNPL*SAFERRRIT 785
FSAT V A + +P FE IT
Sbjct: 180 LFSATLSPPVQMLARKYLKDPELIEFEEEGIT 211
Score = 45.2 bits (102), Expect = 0.003
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 435
LA +++I Q+++GTGKTAAF + M+ + Q L + PT ELA+Q E ++
Sbjct: 35 LAMEGKDLIGQARTGTGKTAAFGIPMVEAIRPTSKGVQGLVVVPTRELAVQVAEELTRIG 94
Query: 436 K 438
K
Sbjct: 95 K 95
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 51.6 bits (118), Expect = 3e-05
Identities = 32/108 (29%), Positives = 55/108 (50%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K H+++GTPG++ D +K + K + V+DEAD+M++ G I +P
Sbjct: 123 KIQPHLVVGTPGRIADL-IKEQALSVHKAESLVIDEADLMLD-MGFLADVDYIGSRMPED 180
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNPL*SAFERRRITGIT*NHIM*SAK 821
QM+ FSAT + F + + NP + E +++T HI+ +K
Sbjct: 181 LQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKQVTAAKIEHILIPSK 228
Score = 51.2 bits (117), Expect = 4e-05
Identities = 24/56 (42%), Positives = 40/56 (71%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 438
+++I QSQ+GTGKT A++L +L+++D K+ QV+ +PT ELA Q + A K+ +
Sbjct: 42 ESVIGQSQTGTGKTHAYLLPLLNKIDPAKDVVQVVITAPTRELANQIYQEALKITQ 97
>UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=4; Tetrapoda|Rep: Probable ATP-dependent RNA helicase
DDX59 - Rattus norvegicus (Rat)
Length = 589
Score = 51.6 bits (118), Expect = 3e-05
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
++++A + +G+GKTAAF+L ++ R P L L+PT ELAIQ A ++ + P
Sbjct: 241 RDILASADTGSGKTAAFLLPVIIRALPEDKTPSALILTPTRELAIQIERQAKELMRGLPR 300
Query: 451 IKLKYAVRGEELP 489
+K V G LP
Sbjct: 301 MKTVLLVGGLPLP 313
Score = 35.1 bits (77), Expect = 2.8
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +3
Query: 603 EADVMINRQGHQDQCIRIHKCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
+AD M+ + G Q Q + + + PS CQ + SAT ++ Q A+ ++ NP+
Sbjct: 324 KADTML-KMGFQQQVLDVLEHTPSDCQTVLVSATIPDSIDQLADQLLHNPV 373
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 51.2 bits (117), Expect = 4e-05
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
HI +G+PG++ ++ + G I++F+LDEAD ++ Q+Q I+ LP++ QM+
Sbjct: 183 HIAVGSPGRIKQL-IELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML 241
Query: 690 FFSATY 707
SATY
Sbjct: 242 AVSATY 247
Score = 38.7 bits (86), Expect = 0.23
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEV 420
++I Q++SGTGKT F L + Q+L L+PT E+A+Q V
Sbjct: 102 DLIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSV 150
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 51.2 bits (117), Expect = 4e-05
Identities = 25/69 (36%), Positives = 40/69 (57%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI 453
++I Q+Q+GTGKT AF + ++ +++ Q L L PT EL +Q E K+ +F EI
Sbjct: 42 DVIGQAQTGTGKTFAFGIPIIEKIEPKIQKTQSLILCPTRELTLQVYEELKKLLRFYQEI 101
Query: 454 KLKYAVRGE 480
++ GE
Sbjct: 102 RIAVVYGGE 110
Score = 48.0 bits (109), Expect = 4e-04
Identities = 26/74 (35%), Positives = 41/74 (55%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
H++I TPG+ D ++ G D+ +K+ LDEAD M+ + G Q+ I K +P Q +
Sbjct: 124 HLIIATPGRAID-HLERGKIDLSALKILTLDEADEML-KMGFQEALETILKKIPEERQTV 181
Query: 690 FFSATYGTAVMQFA 731
FSAT + + A
Sbjct: 182 LFSATLPPFIKKIA 195
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 51.2 bits (117), Expect = 4e-05
Identities = 30/79 (37%), Positives = 43/79 (54%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
I++GTPG++FD + G + VLDEAD M+N QG ++ RI LP T Q++
Sbjct: 150 IIVGTPGRVFDH-INRGNLKLDACDHAVLDEADEMLN-QGFYEEVTRILDRLPKTRQVLL 207
Query: 693 FSATYGTAVMQFAEIIVSN 749
FSAT T + +N
Sbjct: 208 FSATVPTDIQNLIARYTTN 226
Score = 48.4 bits (110), Expect = 3e-04
Identities = 22/56 (39%), Positives = 38/56 (67%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 438
+++I +S++GTGKTAAF L +L ++ +++ + L L PT ELA+Q + +AK
Sbjct: 67 KDLIVRSKTGTGKTAAFGLPLLEKIPADERRVRALILCPTRELALQVADELKMLAK 122
>UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: ATP-dependent RNA
helicase - Lentisphaera araneosa HTCC2155
Length = 542
Score = 51.2 bits (117), Expect = 4e-05
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSN------KNYPQVLCLSPTYELAIQTGEVAAKM 432
Q++ A++Q+GTGKTAAF+++M + +N P+ L L+PT ELA+Q G A +
Sbjct: 153 QDVAAKAQTGTGKTAAFLISMYNHFVNNPQTEVKAGTPRALILAPTRELALQIGADAEGL 212
Query: 433 AKFCPEIKLKYAVRGEELPRGSKI 504
K+C +I+++ G + + ++I
Sbjct: 213 GKYC-DIRVETFFGGMDFDKQAQI 235
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 51.2 bits (117), Expect = 4e-05
Identities = 23/51 (45%), Positives = 37/51 (72%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQ 408
LA +++I QSQ+G+GKT A++L + ++DS+K Q L L+PT+EL +Q
Sbjct: 36 LALKNKDIIGQSQTGSGKTLAYLLPIFQKIDSSKRETQALILAPTHELVMQ 86
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 51.2 bits (117), Expect = 4e-05
Identities = 29/93 (31%), Positives = 51/93 (54%)
Frame = +3
Query: 477 GRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRI 656
G + K + H ++GTPG++ ++ G + KI+ FVLDEAD+++N+ D I
Sbjct: 119 GEDLKNLKKNFHGIVGTPGRVLHL-LQIGSLAITKIRTFVLDEADILMNKNFKID-IFNI 176
Query: 657 HKCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
++ L S Q++ SAT +Q A + +P+
Sbjct: 177 YRYLNSKVQIIICSATIPLYTLQAASKFLLDPV 209
Score = 43.2 bits (97), Expect = 0.010
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEV 420
+++I QS SGTGKT +++ +++ + N PQ L L PT EL+IQ V
Sbjct: 48 RDIIYQSPSGTGKTTCYIIGTSNQLCQSINSPQCLILVPTRELSIQIRNV 97
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 51.2 bits (117), Expect = 4e-05
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
HI +G+PG++ ++ + G I++F+LDEAD ++ Q+Q I+ LP++ QM+
Sbjct: 182 HIAVGSPGRIKQL-IELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML 240
Query: 690 FFSATY 707
SATY
Sbjct: 241 AVSATY 246
Score = 38.3 bits (85), Expect = 0.30
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEV 420
++I Q++SGTGKT F L + Q+L L+PT E+A+Q V
Sbjct: 101 DLIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSV 149
>UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2;
Bacillaceae|Rep: ATP-dependent RNA helicase -
Oceanobacillus iheyensis
Length = 432
Score = 50.8 bits (116), Expect = 5e-05
Identities = 29/92 (31%), Positives = 50/92 (54%)
Frame = +3
Query: 480 RTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIH 659
+ ++ K HI++GTPG++ D VK G + K FV+DEAD+M++ G ++ ++
Sbjct: 115 KMTEKLKTPPHIIVGTPGRILDL-VKSGALSIYTAKSFVVDEADLMLD-LGFIEEVDQLL 172
Query: 660 KCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
Q++ FSAT + F + + NPL
Sbjct: 173 VRSKQDIQLLVFSATIPQRLQHFFKKYIKNPL 204
Score = 41.5 bits (93), Expect = 0.032
Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQT-GEV 420
+++ QS++G+GKT AF+L + ++S+K Q + +PT ELA Q GEV
Sbjct: 40 SVVGQSRTGSGKTHAFLLPLFHGLESDKKEVQFVITAPTRELATQLYGEV 89
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 50.8 bits (116), Expect = 5e-05
Identities = 29/80 (36%), Positives = 43/80 (53%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
IL+ TPG++ D + G + + FVLDEAD M++ G RI K LP+ Q +F
Sbjct: 124 ILVATPGRLLDL-ISQGFISLSSLDFFVLDEADRMLD-MGFIHDIKRILKLLPARRQTLF 181
Query: 693 FSATYGTAVMQFAEIIVSNP 752
FSAT + A +++ P
Sbjct: 182 FSATMPPEIETLANSMLTKP 201
Score = 41.9 bits (94), Expect = 0.024
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAF---VLAMLSRVDSNKNYPQVLCLSPTYELAIQTGE 417
++++ +Q+GTGKTAAF +L L + D K + L L+PT ELAIQ GE
Sbjct: 39 KDLLGCAQTGTGKTAAFSIPILQKLYKTDHRKGI-KALVLTPTRELAIQIGE 89
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 50.8 bits (116), Expect = 5e-05
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
IL+ TPG++ D ++ G + ++VFVLDEAD M++ +D I K LP + Q +
Sbjct: 128 ILVATPGRLLDL-IETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISK-LPKSRQTLL 185
Query: 693 FSATYGTAVMQFAEIIVSNP 752
FSAT + AE I+++P
Sbjct: 186 FSATMPAEIEILAEAILTDP 205
Score = 34.7 bits (76), Expect = 3.7
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNK-----NYPQVLCLSPTYELAIQ 408
+++ +Q+GTGKTAAF L ++++ NK + L L+PT ELA Q
Sbjct: 41 DLLGIAQTGTGKTAAFSLPIINKFGRNKIDIKAKSTRSLILTPTRELASQ 90
>UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein;
n=31; Actinobacteria (class)|Rep: DEAD/DEAH box helicase
domain protein - Mycobacterium sp. (strain KMS)
Length = 507
Score = 50.8 bits (116), Expect = 5e-05
Identities = 28/88 (31%), Positives = 46/88 (52%)
Frame = +3
Query: 489 QGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 668
+ + + +++GTPG++ D + G +G + V VLDEAD M++ G RI +
Sbjct: 133 ESLRKGADVVVGTPGRLLDLAQQ-GHLQLGGLSVLVLDEADEMLD-LGFLPDIERILRQT 190
Query: 669 PSTCQMMFFSATYGTAVMQFAEIIVSNP 752
P T Q M FSAT ++ A ++ P
Sbjct: 191 PDTRQAMLFSATMPDPIITLARTFMNQP 218
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 50.8 bits (116), Expect = 5e-05
Identities = 28/88 (31%), Positives = 49/88 (55%)
Frame = +3
Query: 489 QGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 668
+G + IL+ TPG++FD +F + D+ + V+DEAD M++ G ++ + +
Sbjct: 138 KGVEQGVDILVATPGRLFDIIGQFHL-DLSSVTTLVIDEADRMLDL-GFVRDIEKVKRLI 195
Query: 669 PSTCQMMFFSATYGTAVMQFAEIIVSNP 752
+ Q M FSATY AV Q + +++ P
Sbjct: 196 ATEHQTMLFSATYSDAVKQLSHKMLNQP 223
Score = 44.0 bits (99), Expect = 0.006
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAF---VLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAA 426
LA ++++A +Q+GTGKTA+F VL LS+ ++K + L ++PT ELAIQ
Sbjct: 55 LALEGKDIMACAQTGTGKTASFALPVLEQLSKQPNDKPLLRALVMTPTRELAIQVCANIQ 114
Query: 427 KMAKFCP 447
K ++F P
Sbjct: 115 KYSQFLP 121
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 50.8 bits (116), Expect = 5e-05
Identities = 30/94 (31%), Positives = 48/94 (51%)
Frame = +3
Query: 474 RGRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIR 653
R R + H I+ TPG++ D+ ++ G+F+ + VLDEAD M++ G + Q
Sbjct: 198 RHRQINKLRFHPEIVTATPGRLIDF-LQSGVFNPNRANFLVLDEADRMLD-MGFEPQIRA 255
Query: 654 IHKCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
I L + FSAT+ + Q A +SNP+
Sbjct: 256 IIASLTKDRETFMFSATWPKEIRQLASDFLSNPI 289
Score = 47.6 bits (108), Expect = 5e-04
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNY-----PQVLCLSPTYELAIQTGEVAAKMAK 438
+M+ +++G+GKTA+F++ L + + + P VL LSPT ELA+QT EVA A+
Sbjct: 124 DMVGIAKTGSGKTASFLIPALMHISAQRKISENDGPIVLVLSPTRELALQTDEVA---AQ 180
Query: 439 FCPEIKLKY 465
FC ++ K+
Sbjct: 181 FCVKMGYKH 189
>UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 515
Score = 50.8 bits (116), Expect = 5e-05
Identities = 26/80 (32%), Positives = 45/80 (56%)
Frame = +3
Query: 516 LIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMFF 695
L+ TPG++ D F + + V VLDE+D ++ ++G Q +HK LP T Q +
Sbjct: 142 LVCTPGRIIDHIKNCEGFTLENVLVLVLDESDRLL-QEGFYSQIEEVHKSLPETTQSILV 200
Query: 696 SATYGTAVMQFAEIIVSNPL 755
+AT ++V + AE+ + P+
Sbjct: 201 TATMNSSVSRLAEMSLKKPV 220
Score = 41.1 bits (92), Expect = 0.042
Identities = 22/62 (35%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKN---YPQVLCLSPTYELAIQTGEVAAKMAKF 441
+++ A + +G+GKTAAF++ + R+ +K+ + + LSPT ELA QT V +++ +F
Sbjct: 54 RDVCASAVTGSGKTAAFLIPTVERLLRSKSTEAQTRAVILSPTRELAAQTYSVLSQIIQF 113
Query: 442 CP 447
P
Sbjct: 114 TP 115
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 50.8 bits (116), Expect = 5e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
+ +I Q+++GTGKTA FVL +L+ +++ N + L ++ T ELA Q + ++ KF
Sbjct: 111 EQLICQAKAGTGKTAVFVLTVLNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKS 170
Query: 451 IKLKYAVRGEE 483
+K++ G E
Sbjct: 171 VKVECFYGGGE 181
Score = 41.9 bits (94), Expect = 0.024
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
I++GTPG++ D + + ++K F+LDEAD MI + I P Q M
Sbjct: 197 IVVGTPGRLKDLICERKALKVDRLKYFILDEADTMIEDLNMRKDIQDIFLKSPQEKQFMA 256
Query: 693 FSATY 707
FSAT+
Sbjct: 257 FSATF 261
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 50.4 bits (115), Expect = 7e-05
Identities = 25/60 (41%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNY---PQVLCLSPTYELAIQTGEVAAKMAKF 441
++++A +Q+GTGKTAAFVL +L ++ N++ P+VL +SPT ELA Q + K +++
Sbjct: 39 KHVLASAQTGTGKTAAFVLPILDKLTKNRSEGRGPRVLIVSPTRELATQITDSIKKYSRY 98
Score = 45.6 bits (103), Expect = 0.002
Identities = 27/93 (29%), Positives = 49/93 (52%)
Frame = +3
Query: 477 GRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRI 656
G ++ F IL+ TPG++ D + + G ++V +LDEAD M++ G +I
Sbjct: 113 GLQNRMFSKPIDILVATPGRLLDLYQQKKINFKG-LEVMILDEADRMLD-MGFVPDIRKI 170
Query: 657 HKCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
+ QM+ FSAT+ + + A+ ++NP+
Sbjct: 171 YNATSKKQQMLMFSATFDPPIQKIAQEFLTNPV 203
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 50.4 bits (115), Expect = 7e-05
Identities = 24/86 (27%), Positives = 50/86 (58%)
Frame = +1
Query: 229 NSRNSTSYTLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQ 408
+S S +A ++++A++++GTGK+ A+++ +L R+D K+ Q + + PT ELA+Q
Sbjct: 105 SSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQ 164
Query: 409 TGEVAAKMAKFCPEIKLKYAVRGEEL 486
++ +++K K+ G L
Sbjct: 165 VSQICIQVSKHMGGAKVMATTGGTNL 190
Score = 40.3 bits (90), Expect = 0.074
Identities = 24/81 (29%), Positives = 45/81 (55%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
H++I TPG++ D +K + + +++ VLDEAD ++++ Q I LP Q++
Sbjct: 202 HVVIATPGRILDL-IKKCLEKVDHVQMVVLDEADKLLSQDFVQIMEAFI-LTLPKNRQIL 259
Query: 690 FFSATYGTAVMQFAEIIVSNP 752
+SAT+ +V +F + P
Sbjct: 260 LYSATFPLSVQKFMNSHLQKP 280
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 50.4 bits (115), Expect = 7e-05
Identities = 28/88 (31%), Positives = 46/88 (52%)
Frame = +3
Query: 489 QGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 668
+ K+ +HI++GTPG++ D + + + F+LDEAD M+ + G D I +
Sbjct: 140 RALKSGAHIVVGTPGRVKDL-ITRDRLHLDECHTFILDEADEML-KMGFVDDVTWIMEQA 197
Query: 669 PSTCQMMFFSATYGTAVMQFAEIIVSNP 752
P + Q + FSAT V + E + NP
Sbjct: 198 PESAQRVLFSATMPPMVKEIVERFLRNP 225
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/62 (40%), Positives = 43/62 (69%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
++ + ++Q+GTGKTAAF L +L++++ ++ PQ + ++PT ELAIQ VAA++
Sbjct: 64 RDALGKAQTGTGKTAAFSLPLLNKLNLSQYKPQAIVMAPTRELAIQ---VAAEIKNLGQN 120
Query: 451 IK 456
IK
Sbjct: 121 IK 122
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 50.4 bits (115), Expect = 7e-05
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
+++I +Q+GTGKTAAF + + ++ + Q L L PT EL IQ E K+ K+
Sbjct: 47 KDIIGHAQTGTGKTAAFAIPTIELLEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGN 106
Query: 451 IKLKYAVRGEELPR 492
++ G+E+ R
Sbjct: 107 FEVVPIYGGQEIER 120
Score = 47.2 bits (107), Expect = 6e-04
Identities = 29/91 (31%), Positives = 49/91 (53%)
Frame = +3
Query: 480 RTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIH 659
R + + + I+I TPG+M D ++ G + +IK+ VLDEAD M++ G ++ I
Sbjct: 120 RQLRALRKNPQIVIATPGRMMDH-MRRGSIHLDEIKIVVLDEADEMLD-MGFREDMEFIL 177
Query: 660 KCLPSTCQMMFFSATYGTAVMQFAEIIVSNP 752
K P+ Q + FSAT V+ + ++P
Sbjct: 178 KDTPADRQTIMFSATMTDDVLTLMKKFQNHP 208
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 50.4 bits (115), Expect = 7e-05
Identities = 30/94 (31%), Positives = 49/94 (52%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
+LI TPG++ D + G+ G +++ V+DEAD M++ G RI K +P T Q +F
Sbjct: 125 VLIATPGRLLDHTERGGLLLTG-VELLVIDEADRMLD-MGFIPDIERICKLVPFTRQTLF 182
Query: 693 FSATYGTAVMQFAEIIVSNPL*SAFERRRITGIT 794
F+AT + + E + NP + T +T
Sbjct: 183 FTATMPPEIRRITETFLHNPQKVEVSKPATTAVT 216
Score = 43.6 bits (98), Expect = 0.008
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNK---NYPQVLCLSPTYELAIQTGE 417
++++ +Q+GTGKTAAFVL ML+ ++ + P+ L L PT ELA Q E
Sbjct: 39 KDVLGIAQTGTGKTAAFVLPMLTILEKGRARARMPRTLILEPTRELAAQVKE 90
>UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacillus cereus group|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 389
Score = 50.4 bits (115), Expect = 7e-05
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAK 429
Q++IA+S +GTGKT A++L +L +++ PQV+ L+PT EL +Q E K
Sbjct: 36 QDVIAESPTGTGKTLAYLLPLLHKINPEVKQPQVVVLAPTRELVMQIHEEVQK 88
Score = 38.3 bits (85), Expect = 0.30
Identities = 23/91 (25%), Positives = 42/91 (46%)
Frame = +3
Query: 480 RTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIH 659
R + K H +++G+PG++ + ++ M ++K V DE D ++ +Q +
Sbjct: 108 RQVEKLKKHPRVIVGSPGRILEL-IRMKKLKMHEVKTIVFDEFDQIV-KQKMMGAVQDVI 165
Query: 660 KCLPSTCQMMFFSATYGTAVMQFAEIIVSNP 752
K Q++FFSAT A A + P
Sbjct: 166 KSTMRDRQLVFFSATMTKAAEDAARDLAVEP 196
>UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4;
Mollicutes|Rep: ATP-dependent RNA helicase - Mesoplasma
florum (Acholeplasma florum)
Length = 460
Score = 50.4 bits (115), Expect = 7e-05
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLS--RVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFC 444
QN+IA S +GTGKT AF+L +L+ R D +K Q L ++PT ELA Q + K
Sbjct: 45 QNVIALSHTGTGKTHAFLLPILNNLRFDQDKKNVQALIIAPTRELAKQIFDNVKPFTKNE 104
Query: 445 PEIKLKYAVRGEEL 486
++K+ + GE++
Sbjct: 105 TQLKVDLFIGGEDI 118
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 50.4 bits (115), Expect = 7e-05
Identities = 29/85 (34%), Positives = 45/85 (52%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K +++GTPG++ D ++ G F + I VLDEAD M+N G + I LP
Sbjct: 169 KRKVDVVVGTPGRIMDH-IRQGTFKVNSINCLVLDEADEMLN-MGFLEDIEWIIDQLPKN 226
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNP 752
QM+ FSAT + A+ +++P
Sbjct: 227 KQMVLFSATMPNEIRNIAKKYLNDP 251
Score = 47.6 bits (108), Expect = 5e-04
Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNY-PQVLCLSPTYELAIQTGE 417
++++ Q+Q+GTGKTAAF L ++ ++ NK +VL ++PT ELA Q E
Sbjct: 89 RDLLGQAQTGTGKTAAFALPLIEKLADNKELNAKVLVMTPTRELATQVAE 138
>UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3;
Rhodospirillales|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 731
Score = 50.4 bits (115), Expect = 7e-05
Identities = 28/92 (30%), Positives = 50/92 (54%)
Frame = +3
Query: 480 RTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIH 659
R +Q + HI++GTPG++ D + G ++ +++ VLDEAD M++ G +D+ I
Sbjct: 159 REAQALERGCHIVVGTPGRLCD-HLGRGRLNLSRLRAVVLDEADEMLD-LGFRDELEEIL 216
Query: 660 KCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
P+ + + FSAT + A+ +N L
Sbjct: 217 DATPAERRTLLFSATIAREIAALAKRYQTNAL 248
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 50.4 bits (115), Expect = 7e-05
Identities = 28/99 (28%), Positives = 49/99 (49%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K ++I TPG+ D F + +++ VLDEAD M+ G D+ I +P +
Sbjct: 909 KKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRML-EDGFADELNEILTTIPKS 967
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNPL*SAFERRRITGIT 794
Q M FSAT +V + + ++ P+ + ++ T +T
Sbjct: 968 RQTMLFSATMTDSVDKLIRVGLNRPVRLMVDTKKNTAVT 1006
Score = 40.3 bits (90), Expect = 0.074
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSR-VDSNKNYP--QVLCLSPTYELAIQTGEVAAKMAKF 441
++++ + +G+GKTAAFV+ +L R + + P +V L PT ELA+Q VA K+A +
Sbjct: 828 KDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATY 887
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 50.4 bits (115), Expect = 7e-05
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
+++ TPG++ D ++ G D+G +++ VLDEAD M++ G D I PS Q M
Sbjct: 121 VVVATPGRLLDH-IERGTIDLGDVEILVLDEADRMLD-MGFIDDVEEIIDECPSDRQTMM 178
Query: 693 FSATYGTAVMQFAEIIVSNP 752
FSAT + + ++NP
Sbjct: 179 FSATVSKDIQYLSSKYMNNP 198
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 50.4 bits (115), Expect = 7e-05
Identities = 29/81 (35%), Positives = 47/81 (58%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
+++GTPG++ D ++ +G+++ VLDEAD M+ G ++ I + LP+ Q M
Sbjct: 231 VVVGTPGRIIDL-IEGRSLKLGEVEYLVLDEADQML-AVGFEEAVESILENLPTKRQSML 288
Query: 693 FSATYGTAVMQFAEIIVSNPL 755
FSAT T V + A + NPL
Sbjct: 289 FSATMPTWVKKLARKYLDNPL 309
Score = 35.5 bits (78), Expect = 2.1
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 14/94 (14%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDS----------NKNYPQVLCLSPTYELAIQT--- 411
+++IA++++GTGKT AF + ++ R+ + P+ L L+PT ELA Q
Sbjct: 140 RDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKE 199
Query: 412 -GEVAAKMAKFCPEIKLKYAVRGEELPRGSKITV 510
E A ++ C + Y ++ L RG + V
Sbjct: 200 IKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVV 233
>UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DRS1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 808
Score = 50.4 bits (115), Expect = 7e-05
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
ILI TPG++ D F + + V V+DEAD M+ G D+ I K P + Q M
Sbjct: 350 ILIATPGRLIDHLTNTPSFTLSALDVLVIDEADRML-EAGFTDELEEIIKACPRSRQTML 408
Query: 693 FSATYGTAVMQFAEIIVSNPL 755
FSAT +V + ++ + P+
Sbjct: 409 FSATMTDSVDELVKLSLDKPI 429
Score = 35.9 bits (79), Expect = 1.6
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRV---DSNKNYP--QVLCLSPTYELAIQTGEVAAKMA 435
++++ + +G+GKTAAF++ +L R+ D K +VL L PT ELA+Q V +A
Sbjct: 260 RDILGSAVTGSGKTAAFMVPILERLCYRDRGKGGAACRVLVLCPTRELAVQCEAVGKALA 319
Query: 436 K 438
+
Sbjct: 320 E 320
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 50.4 bits (115), Expect = 7e-05
Identities = 24/58 (41%), Positives = 37/58 (63%)
Frame = +1
Query: 286 QSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKL 459
Q+++G+GKTAAF L +L ++D++ Q L L PT ELA Q ++A+F P K+
Sbjct: 46 QAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKI 103
Score = 46.8 bits (106), Expect = 9e-04
Identities = 25/93 (26%), Positives = 48/93 (51%)
Frame = +3
Query: 477 GRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRI 656
G ++ HI++ TPG++ D ++ G + + V+DEAD M++ G D +
Sbjct: 113 GMQRDSLQHAPHIIVATPGRLLD-HLQKGTVSLDALNTLVMDEADRMLD-MGFSDAIDDV 170
Query: 657 HKCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
+ P++ Q + FSAT+ A+ + + +PL
Sbjct: 171 IRFAPASRQTLLFSATWPEAIAAISGRVQRDPL 203
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 50.0 bits (114), Expect = 9e-05
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = +3
Query: 486 SQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKC 665
+ +N I++GTPG++ D+ V D+ +K VLDEAD M++ G D+ + +
Sbjct: 160 ADALENGVQIVVGTPGRLADF-VGRNRIDLSAVKTVVLDEADKMLD-MGFADEIKTVMRD 217
Query: 666 LPSTCQMMFFSATYGTAV 719
LP + Q + FSAT+ ++
Sbjct: 218 LPGSRQTVLFSATFPESI 235
Score = 47.2 bits (107), Expect = 6e-04
Identities = 24/70 (34%), Positives = 43/70 (61%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
+++I Q+++G+GKTAAF L +L++++ ++ Q L L PT ELA Q K+ + P
Sbjct: 85 KDIIGQAKTGSGKTAAFSLPILNKINLDQPLLQALILCPTRELASQVVTEIRKLGRRLPG 144
Query: 451 IKLKYAVRGE 480
+K+ G+
Sbjct: 145 LKVLAMTGGQ 154
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 50.0 bits (114), Expect = 9e-05
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQ 408
+N+ +S +GTGKTA+FVL +L +++ NK Q + ++PT ELA+Q
Sbjct: 39 KNIFGKSSTGTGKTASFVLPILEKIEPNKRRVQAVIMAPTRELAMQ 84
Score = 39.5 bits (88), Expect = 0.13
Identities = 23/75 (30%), Positives = 41/75 (54%)
Frame = +3
Query: 507 SHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQM 686
S I++GTPG++ D + + ++ +LDEAD M+ + G +++ + + + Q+
Sbjct: 120 SQIVVGTPGRVND-HLNRKTLKLDDVRTIILDEADEML-KMGFKNEIDALFERVSPDVQI 177
Query: 687 MFFSATYGTAVMQFA 731
FSAT VMQ A
Sbjct: 178 GLFSATTSPKVMQIA 192
>UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_54,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 696
Score = 50.0 bits (114), Expect = 9e-05
Identities = 29/81 (35%), Positives = 41/81 (50%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
+++I TPG++ + FD +KV VLDEAD+M+ G I LP Q M
Sbjct: 179 NVIICTPGRLLQHFEESPGFDANNLKVLVLDEADMML-ELGFWGPLKAIMNYLPKEKQTM 237
Query: 690 FFSATYGTAVMQFAEIIVSNP 752
FSAT + Q +I + NP
Sbjct: 238 LFSATLNQTIHQLCKISLQNP 258
>UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep:
LOC562123 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 483
Score = 49.6 bits (113), Expect = 1e-04
Identities = 28/86 (32%), Positives = 48/86 (55%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K++ I+IGTPG++ + +K + ++ V+DEAD M+ + G Q Q + I + +P
Sbjct: 291 KHNIKIVIGTPGRLLEI-LKQKAVQLDHVRTVVVDEADTML-KMGFQQQVLDILEQVPDD 348
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNPL 755
Q + SAT T Q AE + +P+
Sbjct: 349 HQTLLTSATIPTGTQQLAERLTHDPV 374
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRV----DSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 438
+++IA + +G+GKT AF+L ++ R ++ + P L L+PT ELAIQ E A ++ +
Sbjct: 208 RDVIATADTGSGKTVAFLLPVVMRALQSESASPSCPACLILTPTRELAIQIEEQAKELMR 267
Query: 439 FCPEIKLKYAVRGEELP 489
P + V G LP
Sbjct: 268 GLPNMGTALLVGGMPLP 284
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 49.6 bits (113), Expect = 1e-04
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF-CP 447
+++I Q+Q+GTGKTAAF + +LS +D + N Q L ++PT ELA Q + + K+ C
Sbjct: 39 KDIIGQAQTGTGKTAAFAIPILSNLDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCS 98
Query: 448 EIKL 459
+I L
Sbjct: 99 KIAL 102
Score = 45.2 bits (102), Expect = 0.003
Identities = 25/79 (31%), Positives = 44/79 (55%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
+I++ TPG++ D + D+ IK F LDEAD ++ + G ++ I+I LP Q
Sbjct: 121 NIVVATPGRLEDLLAQ-NKIDLSHIKTFTLDEADELL-KIGFYNEIIKIMNKLPKKRQNF 178
Query: 690 FFSATYGTAVMQFAEIIVS 746
FF+AT+ + ++ I +
Sbjct: 179 FFTATFDEKTKKLSQEITN 197
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 49.6 bits (113), Expect = 1e-04
Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI 453
+++A +Q+GTGKTAAF L +L ++D PQ L L PT EL +Q +K+ +
Sbjct: 42 DVVALAQTGTGKTAAFGLPLLQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGL 101
Query: 454 KLKYAVRG-------EELPRGSKITVTF---LLVLQERCLIGVSSL 561
K+ G L RG I V LL L ER + +S++
Sbjct: 102 KVLPVYGGSSIDSQIRSLKRGVHIIVATPGRLLDLMERKTVSLSTV 147
Score = 33.9 bits (74), Expect = 6.4
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 149 VKTFEALHLKPNLLKGVYAMGFNAPSKIQETALP 250
+KTFE L + P + K + MG+ P +QE +P
Sbjct: 1 MKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIP 34
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 49.6 bits (113), Expect = 1e-04
Identities = 24/56 (42%), Positives = 37/56 (66%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 438
+++I Q+Q+GTGKTAAF + ++ R+ + Q L L+PT ELAIQ E K+ +
Sbjct: 44 KDVIGQAQTGTGKTAAFGVPIVERLVPGQRAVQALVLTPTRELAIQVAEEITKIGR 99
Score = 42.7 bits (96), Expect = 0.014
Identities = 24/81 (29%), Positives = 46/81 (56%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
++IGTPG++ D + D+ ++++ VLDEAD M++ G + +I + P+ Q +
Sbjct: 127 VVIGTPGRILDH-LGRSTLDLSQVRMVVLDEADEMLD-MGFIEDIEKILQNTPAERQTLL 184
Query: 693 FSATYGTAVMQFAEIIVSNPL 755
FSAT + + A + +P+
Sbjct: 185 FSATMPPEIRRLAGRYMRDPI 205
>UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putative;
n=58; Proteobacteria|Rep: ATP-dependent RNA helicase
RhlE, putative - Burkholderia mallei (Pseudomonas
mallei)
Length = 516
Score = 49.6 bits (113), Expect = 1e-04
Identities = 28/80 (35%), Positives = 44/80 (55%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
IL+ TPG++ D ++ G D+ ++K+ VLDEAD M++ G D I P+T Q M
Sbjct: 191 ILVATPGRLLDH-LERGRIDLSELKMLVLDEADRMLD-MGFIDDIDTIVAATPATRQTML 248
Query: 693 FSATYGTAVMQFAEIIVSNP 752
FSAT + ++ +P
Sbjct: 249 FSATLDGKIGSLTNRLLKDP 268
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 49.6 bits (113), Expect = 1e-04
Identities = 21/56 (37%), Positives = 37/56 (66%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 438
++++ SQ+GTGKT A++L + ++D++K Q L L+PT+EL +Q +AK
Sbjct: 40 KDLLINSQTGTGKTLAYLLPIFEKIDTSKRETQALILAPTHELVMQITNQVELLAK 95
>UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Maricaulis maris (strain MCS10)
Length = 787
Score = 49.6 bits (113), Expect = 1e-04
Identities = 27/74 (36%), Positives = 44/74 (59%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
HI++GTPG++ D ++ G DM ++K VLDEAD M++ G ++ I P++ + +
Sbjct: 126 HIVVGTPGRLRDH-IERGALDMSQLKAVVLDEADEMLD-FGFREDLEYILDAAPASRRTL 183
Query: 690 FFSATYGTAVMQFA 731
FSAT A+ A
Sbjct: 184 LFSATVPRAIADIA 197
Score = 35.1 bits (77), Expect = 2.8
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRV--DSNK----NYPQVLCLSPTYELAIQ 408
++++ +Q+G+GKTAAF +AM + D ++ + P L ++PT ELA+Q
Sbjct: 38 RDLLVSAQTGSGKTAAFGMAMAKTLLGDDDQFNRPDLPMALIVAPTRELALQ 89
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 49.6 bits (113), Expect = 1e-04
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 441
+++A +Q+GTGKTAAF ++ ++D+N Q L LSPT EL +Q +K+
Sbjct: 42 DLVALAQTGTGKTAAFGFPVIQKIDANNRNTQALILSPTRELCLQITNELKNYSKY 97
Score = 45.6 bits (103), Expect = 0.002
Identities = 25/90 (27%), Positives = 45/90 (50%)
Frame = +3
Query: 486 SQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKC 665
++ K + I++ TPG+M D + + D+ +I +LDEAD M+N G + + I
Sbjct: 116 ARDIKRGAQIIVATPGRMQDM-INRRLVDISQINYCILDEADEMLN-MGFYEDIVNILST 173
Query: 666 LPSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
P FSAT V + + +++P+
Sbjct: 174 TPDEKNTWLFSATMPAEVARIGKQFMTDPI 203
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 49.6 bits (113), Expect = 1e-04
Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVD--SNKNYPQVLCLSPTYELAIQTGEVAAK 429
LA ++++ Q+++GTGKTAAF + ++ R++ N PQ L L+PT ELA+Q + AK
Sbjct: 37 LALEGRDVLGQARTGTGKTAAFGIPIIERLEHGPNSRNPQALILTPTRELAVQVRDEIAK 96
Query: 430 M 432
+
Sbjct: 97 L 97
Score = 42.3 bits (95), Expect = 0.018
Identities = 25/85 (29%), Positives = 44/85 (51%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K HI++GTPG++ D + + + ++ VLDEAD M++ G + +I + P
Sbjct: 122 KRAPHIVVGTPGRVIDLMTRRAL-QLEMLRTVVLDEADRMLD-IGFRPDIEKILRRCPEE 179
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNP 752
Q + SAT + + A+ + NP
Sbjct: 180 RQTLLLSATVPPTIEKLAQRYMRNP 204
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 49.6 bits (113), Expect = 1e-04
Identities = 31/101 (30%), Positives = 49/101 (48%)
Frame = +3
Query: 489 QGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 668
Q K+ I++ TPG++ D ++ + + I V DEAD M + G +I K L
Sbjct: 119 QALKSGIDIVVATPGRLLDLALQNAL-SLEHIDTLVFDEADRMFD-MGFIHDIKQIVKML 176
Query: 669 PSTCQMMFFSATYGTAVMQFAEIIVSNPL*SAFERRRITGI 791
P Q + FSATY + VM ++ +PL E + T +
Sbjct: 177 PEKRQNLLFSATYPSEVMSLCNSMLKDPLRIQIEEQNSTAL 217
Score = 44.0 bits (99), Expect = 0.006
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDS---NKNYPQ--VLCLSPTYELAIQTGEVAAKMA 435
++++A +++GTGKTAAF L +L ++ S NK PQ VL L PT ELA Q + A
Sbjct: 39 KDILAGARTGTGKTAAFALPILEKLSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYA 98
Query: 436 KFCP 447
K P
Sbjct: 99 KKLP 102
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 49.6 bits (113), Expect = 1e-04
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSR-VDSNKNYP---QVLCLSPTYELAIQTGEVAAKMAK 438
+N++A +Q+GTGKTA+FVL +L R D+ K P + + L+PT ELA+Q E + AK
Sbjct: 39 KNVLAAAQTGTGKTASFVLPLLHRFADAPKIRPKRVRAIILTPTRELALQVEENINQYAK 98
Query: 439 FCP 447
+ P
Sbjct: 99 YLP 101
Score = 38.3 bits (85), Expect = 0.30
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGM-FDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
+L+ TPG++ D + + FD ++ V VLDEAD M++ G + I + LP Q +
Sbjct: 126 LLVATPGRLLDMYTQRAIRFD--EVSVLVLDEADRMLD-MGFIEDINSIIEKLPEQRQNL 182
Query: 690 FFSATYGTAVMQFAEIIVSNPL 755
FSAT V A+ + + +
Sbjct: 183 LFSATLSKQVKALAKSAIPDAI 204
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 49.6 bits (113), Expect = 1e-04
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEV 420
++IAQ+QSGTGKT+ F L + VD++ Q L SPT ELA QT +V
Sbjct: 315 DVIAQAQSGTGKTSMFALTVYQMVDTSNREVQALISSPTRELASQTEKV 363
Score = 34.7 bits (76), Expect = 3.7
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +2
Query: 77 RQGLVESKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETAL 247
R G S +D E + + + +F+ + +K +LL+G+YA F PS +Q+ A+
Sbjct: 251 RGGCRNSAVDDEKLVFETTEGVELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAV 307
>UniRef50_A7U5X2 Cluster: DEAD-box helicase 15; n=2; Plasmodium
falciparum|Rep: DEAD-box helicase 15 - Plasmodium
falciparum
Length = 717
Score = 49.6 bits (113), Expect = 1e-04
Identities = 25/87 (28%), Positives = 47/87 (54%)
Frame = +3
Query: 495 FKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPS 674
FK + I + TPG++ D + + +++ V DEAD ++ G +++C++I
Sbjct: 215 FKKRNDIFVCTPGRILDLLLNSSSDFINYLEIVVFDEADKLLEL-GFKEECLKILDVCKF 273
Query: 675 TCQMMFFSATYGTAVMQFAEIIVSNPL 755
Q++FFSAT + + Q A + NP+
Sbjct: 274 KKQILFFSATLTSDIKQLANFSLKNPV 300
Score = 35.1 bits (77), Expect = 2.8
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 13/75 (17%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSR-------------VDSNKNYPQVLCLSPTYE 396
LA ++++A S++G+GKT AFVL +L R + + N + L L PT E
Sbjct: 120 LALEGKSILANSETGSGKTLAFVLPILERLLQSVNIKMRRNNMKGSYNITKALILLPTRE 179
Query: 397 LAIQTGEVAAKMAKF 441
L++Q +V + K+
Sbjct: 180 LSLQCYDVIRSLTKY 194
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 49.2 bits (112), Expect = 2e-04
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFC-P 447
+++I QSQ+G+GKT F+L ++ +V + Q++ +P+ ELA Q + A ++A+F P
Sbjct: 40 KSVIGQSQTGSGKTHTFLLPLMDKVKPTIDEVQIVITAPSRELANQIYQEAQQLARFSQP 99
Query: 448 EIKLKYAVRGEELPR 492
EI++ V G + R
Sbjct: 100 EIRVSNFVGGTDKQR 114
Score = 44.8 bits (101), Expect = 0.003
Identities = 30/109 (27%), Positives = 55/109 (50%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
H++IGTPG++ D + + FV+DEAD+ ++ G + +I LP QM+
Sbjct: 125 HVVIGTPGRILDM-MNEQALKVHTAFAFVVDEADMTLD-MGFLAEVDQIAGRLPEKLQML 182
Query: 690 FFSATYGTAVMQFAEIIVSNPL*SAFERRRITGIT*NHIM*SAKVQKTN 836
FSAT + F + + NP+ + + + T ++ + S K + +N
Sbjct: 183 VFSATIPEKLRPFLKKYLENPVIEHIKPKAVISETIDNWLISTKGKNSN 231
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 49.2 bits (112), Expect = 2e-04
Identities = 28/81 (34%), Positives = 46/81 (56%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
IL+ TPG++ D + M +KV VLDEAD M++ G ++ + LP Q M
Sbjct: 149 ILVATPGRLLDL-INQKMIRFDNLKVLVLDEADRMLD-MGFIRDIKKVIEYLPKNRQNMM 206
Query: 693 FSATYGTAVMQFAEIIVSNPL 755
FSAT+ T + + A ++++P+
Sbjct: 207 FSATFSTPIKKLALGLLNDPV 227
Score = 40.3 bits (90), Expect = 0.074
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVL---AMLSRVDSNKNYP-QVLCLSPTYELAIQTGEVAAK 429
++++A +Q+GTGKTAAF+L +L D K Y L L+PT ELA Q E +AK
Sbjct: 62 KDIMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVHSLVLTPTRELAAQV-EASAK 117
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 49.2 bits (112), Expect = 2e-04
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI 453
+++ +Q+GTGKTAAF + ++ D+ Q L L PT EL +Q M ++ ++
Sbjct: 42 DLVGLAQTGTGKTAAFGIPLIQLTDTRLKRTQALVLCPTRELCVQVAGDLNLMGRYVQKL 101
Query: 454 KLKYAVRG-------EELPRGSKITVTFLLVLQERCLIGVSSLACLIWVKL 585
K+ G EEL +G+++ V L + G L+ + WV L
Sbjct: 102 KIVPVYGGASIVSQTEELRKGAQVVVATPGRLHDLIRRGAVDLSGVSWVVL 152
Score = 46.8 bits (106), Expect = 9e-04
Identities = 30/107 (28%), Positives = 51/107 (47%)
Frame = +3
Query: 486 SQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKC 665
++ + + +++ TPG++ D ++ G D+ + VLDEAD M+ + G QD+ I
Sbjct: 116 TEELRKGAQVVVATPGRLHDL-IRRGAVDLSGVSWVVLDEADEML-QMGFQDELNAILAV 173
Query: 666 LPSTCQMMFFSATYGTAVMQFAEIIVSNPL*SAFERRRITGIT*NHI 806
P + + FSAT V A + +PL RR +HI
Sbjct: 174 TPDSKNTLLFSATMPREVAAIAANYMKDPLEIIVGRRNAGAENVDHI 220
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 49.2 bits (112), Expect = 2e-04
Identities = 27/81 (33%), Positives = 48/81 (59%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
I++ TPG++ D ++ + ++ VLDEAD +++ G ++ RI + LP Q +F
Sbjct: 132 IVVATPGRLLDL-LEHNALKISEVSTLVLDEADRLLDL-GFGEELGRILELLPPRRQNLF 189
Query: 693 FSATYGTAVMQFAEIIVSNPL 755
FSAT+ A+ AE ++ +PL
Sbjct: 190 FSATFPPAIEVLAESMLHDPL 210
Score = 48.0 bits (109), Expect = 4e-04
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRV-DSNKNYPQV---LCLSPTYELAIQTGEVAAKMAK 438
++++ +Q+G+GKTAAF L ML ++ ++ P+ L L PT ELA Q GE A AK
Sbjct: 43 RDVVGSAQTGSGKTAAFALPMLQQLANAPTGTPRPTRGLILVPTRELAAQVGEAIAGFAK 102
Query: 439 FCPEIKLKYAV 471
+ P+ ++K AV
Sbjct: 103 YLPQ-RVKVAV 112
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 49.2 bits (112), Expect = 2e-04
Identities = 25/81 (30%), Positives = 49/81 (60%)
Frame = +3
Query: 507 SHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQM 686
++I++ TPG+++D+ + G+ ++ +++ +LDE+D M++ G RI +P+ Q
Sbjct: 123 ANIVVATPGRLYDF-MSRGLINLTTVRMLILDESDRMLD-MGFLPTIKRIIAAMPAERQT 180
Query: 687 MFFSATYGTAVMQFAEIIVSN 749
+ FSAT ++V Q E V N
Sbjct: 181 LLFSATLESSVKQLVETHVRN 201
Score = 44.0 bits (99), Expect = 0.006
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQV--LCLSPTYELAIQTGEVAAKMAK 438
++++A +Q+GTGKT AF+L + + + P V L L+PT ELA+Q E ++A+
Sbjct: 40 KDIVATAQTGTGKTLAFLLPTIQLLSTEPRQPGVRALILTPTRELALQINEALLQIAR 97
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 49.2 bits (112), Expect = 2e-04
Identities = 28/81 (34%), Positives = 46/81 (56%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
+LI TPG++ D + + MG +++ V+DEAD M++ G RI K P T Q +F
Sbjct: 130 VLIATPGRLLDHFERGTLLLMG-VEILVIDEADRMLD-MGFIPDIERICKLTPFTRQTLF 187
Query: 693 FSATYGTAVMQFAEIIVSNPL 755
FSAT +++ E + +P+
Sbjct: 188 FSATMAPEIIKLTEQFLHSPV 208
Score = 42.7 bits (96), Expect = 0.014
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNK---NYPQVLCLSPTYELAIQTGE 417
++++ +Q+GTGKTA+FVL ML+ ++ + P+ L L PT ELA Q E
Sbjct: 44 KDVLGIAQTGTGKTASFVLPMLTLLEKGRAKARMPRTLILEPTRELAAQVKE 95
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 49.2 bits (112), Expect = 2e-04
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGE 417
++++ +Q+GTGKTAAF L +L+ +D PQ L L PT ELA Q E
Sbjct: 47 RDVVGLAQTGTGKTAAFALPILANIDVKVRSPQALVLCPTRELAQQVAE 95
Score = 45.2 bits (102), Expect = 0.003
Identities = 29/88 (32%), Positives = 43/88 (48%)
Frame = +3
Query: 489 QGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 668
+ + +HI++ TPG++ D ++ D+ I VLDEAD M+ R G D I
Sbjct: 123 KSLREGTHIVVATPGRLLD-HIERRSIDLTGINAVVLDEADEML-RMGFIDDVDTILAKT 180
Query: 669 PSTCQMMFFSATYGTAVMQFAEIIVSNP 752
P ++ FSAT V A +SNP
Sbjct: 181 PKERKVALFSATMPKRVRDIANKHLSNP 208
>UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL'
isoform 5; n=2; Nicotiana tabacum|Rep: Putative
chloroplast RNA helicase VDL' isoform 5 - Nicotiana
tabacum (Common tobacco)
Length = 390
Score = 49.2 bits (112), Expect = 2e-04
Identities = 24/62 (38%), Positives = 40/62 (64%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
++ + +Q+G+GKT A++L MLS +DS ++ Q L + PT EL +Q +VA +A E
Sbjct: 105 RDCVLHAQTGSGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSE 164
Query: 451 IK 456
+K
Sbjct: 165 LK 166
>UniRef50_A2E773 Cluster: Helicase conserved C-terminal domain
containing protein; n=3; Trichomonas vaginalis G3|Rep:
Helicase conserved C-terminal domain containing protein
- Trichomonas vaginalis G3
Length = 418
Score = 49.2 bits (112), Expect = 2e-04
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 435
+++ Q+Q+G+GKT AFV+ L RVD N + QV+ L P EL QT E K+A
Sbjct: 80 SILGQAQNGSGKTLAFVVNSLLRVDRNSSKVQVVILVPNMELVDQTEEYFQKLA 133
>UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 568
Score = 49.2 bits (112), Expect = 2e-04
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVL----AMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 441
+++AQ+++GTGKT AF+L +L R S N VL +SPT ELA+Q + A + +
Sbjct: 117 DVLAQAKTGTGKTIAFLLPALQTLLRRPSSRGNDVSVLVISPTRELALQIAKEAEALLQR 176
Query: 442 CPEIKLKYAVRG 477
P+ K+ A+ G
Sbjct: 177 LPQYKVCTAIGG 188
Score = 39.1 bits (87), Expect = 0.17
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Frame = +3
Query: 459 KVCS*RGRTSQGFKNHS-----HILIGTPGKMFDWGVKFGMFDM-GKIKVFVLDEADVMI 620
KVC+ G T++ + ILIGTPG++ D + + +M + FVLDEAD ++
Sbjct: 181 KVCTAIGGTNKDAEQRRILRGCQILIGTPGRLMDHLEEQSVAEMLQSVDTFVLDEADRLL 240
Query: 621 NRQGHQDQCIRIHKCLPS----TCQMMFFSATYGTAVMQFAEIIVS 746
+ G Q +I LP+ Q M FSAT V + + I ++
Sbjct: 241 D-MGFMPQLKKIVAALPNRQKVPRQGMLFSATVAEHVAKVSSIALA 285
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 49.2 bits (112), Expect = 2e-04
Identities = 27/81 (33%), Positives = 46/81 (56%)
Frame = +3
Query: 507 SHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQM 686
++I++GTPG+ D + G+ + K+ FVLDEAD M++ G + +I LP Q
Sbjct: 120 ANIIVGTPGRTLDL-IDRGILNFDKVSYFVLDEADEMLD-MGFIEDIKKIINVLPVERQS 177
Query: 687 MFFSATYGTAVMQFAEIIVSN 749
FSAT + +++ A+ + N
Sbjct: 178 FLFSATIPSEIIELAKGFMHN 198
Score = 41.5 bits (93), Expect = 0.032
Identities = 20/66 (30%), Positives = 40/66 (60%)
Frame = +1
Query: 241 STSYTLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEV 420
S + +A +++ +S++G+GKTAA+++ +++ K + L L PT ELA+Q +V
Sbjct: 30 SMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINNTAKEKGI-RALILLPTRELAVQVAKV 88
Query: 421 AAKMAK 438
+ + K
Sbjct: 89 SEALGK 94
>UniRef50_Q9FVV4 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 55; n=2; Arabidopsis thaliana|Rep: Putative
DEAD-box ATP-dependent RNA helicase 55 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 465
Score = 49.2 bits (112), Expect = 2e-04
Identities = 28/82 (34%), Positives = 44/82 (53%)
Frame = +3
Query: 507 SHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQM 686
+++LIGTPG++ D + D +++ +LDEAD +++ G Q Q I LP +
Sbjct: 136 ANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLD-MGFQKQVNYIISRLPKQRRT 194
Query: 687 MFFSATYGTAVMQFAEIIVSNP 752
FSAT AV A+ + NP
Sbjct: 195 GLFSATQTQAVADLAKAGLRNP 216
Score = 33.9 bits (74), Expect = 6.4
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYP----QVL--CLSPTYELAIQTGEVA 423
++++ + +G+GKT AF+L + + + +YP QV+ +SPT EL+ Q +VA
Sbjct: 55 KDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVA 111
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 48.8 bits (111), Expect = 2e-04
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKM 432
+++I Q+++GTGKT AFVL +L ++D + Q L ++PT ELA+Q KM
Sbjct: 43 KDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIVAPTRELALQITTEIKKM 96
Score = 41.5 bits (93), Expect = 0.032
Identities = 26/85 (30%), Positives = 42/85 (49%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K ++HI++ TPG++ D ++ D+ + VLDEAD M+ G I P +
Sbjct: 122 KGNTHIVVATPGRLLD-HIRRETIDLSNLSTIVLDEADQML-YFGFLYDIEDILDETPGS 179
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNP 752
Q M FSAT + + A+ + P
Sbjct: 180 KQTMLFSATIPKDIKKLAKRYMDEP 204
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 48.8 bits (111), Expect = 2e-04
Identities = 31/81 (38%), Positives = 44/81 (54%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
ILI TPG++ D + G + I+ FVLDEAD M++ G +I LP Q +F
Sbjct: 208 ILIATPGRLLDL-MNQGHLHLRNIEFFVLDEADRMLD-MGFIHDIRKILAELPKKKQSLF 265
Query: 693 FSATYGTAVMQFAEIIVSNPL 755
FSAT + + A I+ NP+
Sbjct: 266 FSATMPPEITRLAASILHNPV 286
Score = 41.9 bits (94), Expect = 0.024
Identities = 24/53 (45%), Positives = 37/53 (69%), Gaps = 5/53 (9%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAF---VLAMLSRVDSNKNYPQV--LCLSPTYELAIQTGE 417
+++ +Q+GTGKTAAF VL +L+ V +N+ ++ L ++PT ELAIQ GE
Sbjct: 121 DLLGCAQTGTGKTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGE 173
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 48.8 bits (111), Expect = 2e-04
Identities = 28/82 (34%), Positives = 48/82 (58%)
Frame = +3
Query: 507 SHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQM 686
++I+I TPG++ ++ G ++ +IK VLDEAD M++ G D +R+ LP+ Q
Sbjct: 124 ANIVIATPGRLLAQ-LQSGTANLKQIKHLVLDEADRMLD-MGFYDDIVRVISYLPTERQT 181
Query: 687 MFFSATYGTAVMQFAEIIVSNP 752
+ FSAT T + A ++ +P
Sbjct: 182 IMFSATMPTKMRALANKLMKDP 203
Score = 43.6 bits (98), Expect = 0.008
Identities = 22/46 (47%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSR-VDSNKNYPQVLCLSPTYELAIQ 408
+++A +Q+GTGKTAA++L +L + ++SN + L L PT ELAIQ
Sbjct: 40 DLVACAQTGTGKTAAYMLPILHKIIESNTDSLDTLVLVPTRELAIQ 85
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 48.8 bits (111), Expect = 2e-04
Identities = 21/56 (37%), Positives = 37/56 (66%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 438
+++IA+S +GTGKT A+++ +L R+D Q + L+P++ELA+Q + K K
Sbjct: 48 KDLIAESPTGTGKTLAYLIPILHRIDPESKAVQAVILAPSHELAMQIHQTIEKWTK 103
>UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: DEAD/DEAH box
helicase-like protein - Lentisphaera araneosa HTCC2155
Length = 412
Score = 48.8 bits (111), Expect = 2e-04
Identities = 29/92 (31%), Positives = 50/92 (54%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
+LI TPG++ + + G + ++++ +LDEAD M++ G D+ + + LP Q +
Sbjct: 129 VLIATPGRIIEL-INLGEVRLVELEMLILDEADKMLDL-GFADELKELLEALPKKRQNLL 186
Query: 693 FSATYGTAVMQFAEIIVSNPL*SAFERRRITG 788
FSAT V Q AE ++ + R +ITG
Sbjct: 187 FSATLPQKVQQLAEEFLNAAVELRISRDQITG 218
Score = 39.9 bits (89), Expect = 0.098
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDS---NKNYPQV--LCLSPTYELAIQTGEVAAKMA 435
++++A+SQ+GTGKT AF ++ R+++ K + L L PT ELA+Q + A
Sbjct: 39 KDLLAESQTGTGKTLAFSFPLIERINTLPPKKKKISILGLVLVPTRELALQVEKAFTNYA 98
Query: 436 KF-CPEIKLKYAVRGEEL 486
+F IK + GE +
Sbjct: 99 EFSLRPIKTATLIGGENI 116
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 48.8 bits (111), Expect = 2e-04
Identities = 27/94 (28%), Positives = 50/94 (53%)
Frame = +3
Query: 474 RGRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIR 653
RG + ++ +++ TPG++ D+ ++ G M ++ VLDEAD M++ G + Q +
Sbjct: 238 RGPQANDLRHLPSLVVATPGRLIDF-IEGGQCPMNRVNFLVLDEADQMLD-MGFEPQIRK 295
Query: 654 IHKCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
I + Q M FSAT+ + Q A + +P+
Sbjct: 296 IIGHISKDRQTMMFSATWPKEIQQLAADFLVDPV 329
Score = 38.7 bits (86), Expect = 0.23
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Frame = +1
Query: 241 STSYTLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNK-----NYPQVLCLSPTYELAI 405
S S +A ++I +++G+GKTAAF++ + + + + P VL LSPT ELA
Sbjct: 153 SVSIPVALKGHDLIGIAKTGSGKTAAFLIPAMVHIGLQEPMYRGDGPIVLVLSPTRELAQ 212
Query: 406 QTGEVAAKMAKFCPEIKLK 462
Q EVA FC + ++
Sbjct: 213 QIAEVA---KGFCDNLMIR 228
>UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase DBP4 -
Chaetomium globosum (Soil fungus)
Length = 825
Score = 48.8 bits (111), Expect = 2e-04
Identities = 27/81 (33%), Positives = 44/81 (54%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
+IL+ TPG+M + FD+ +++ VLDEAD +++ G Q + + LP+T Q +
Sbjct: 176 NILVCTPGRMLQHLDQTANFDVNNLQILVLDEADRIMD-MGFQSAVDALVEHLPTTRQTL 234
Query: 690 FFSATYGTAVMQFAEIIVSNP 752
FSAT V A + + P
Sbjct: 235 LFSATQSKRVSDLARLSLKEP 255
Score = 35.5 bits (78), Expect = 2.1
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNK--NYPQV--LCLSPTYELAIQTGEVA 423
LA ++++ +++G+GKT AF++ +L ++ K Y + L +SPT ELA+Q EV
Sbjct: 86 LALKGRDILGAAKTGSGKTLAFLVPVLEKLYHAKWTEYDGLGALIISPTRELAVQIFEVL 145
Query: 424 AKMAK 438
K+ +
Sbjct: 146 RKIGR 150
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 48.4 bits (110), Expect = 3e-04
Identities = 25/68 (36%), Positives = 41/68 (60%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI 453
++I +++SGTGKTA F + L +D + QV+ L+PT E+AIQ EV A + +
Sbjct: 63 DLIVRAKSGTGKTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGL 122
Query: 454 KLKYAVRG 477
K++ + G
Sbjct: 123 KVESFIGG 130
Score = 43.6 bits (98), Expect = 0.008
Identities = 28/88 (31%), Positives = 47/88 (53%)
Frame = +3
Query: 501 NHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTC 680
++ HI IG PG++ + G M +++FVLDEAD ++ + Q I+ LP
Sbjct: 141 SNCHIAIGAPGRVKHL-IDKGYLKMDHVRLFVLDEADKLM-EESFQKDINYIYAKLPPNR 198
Query: 681 QMMFFSATYGTAVMQFAEIIVSNPL*SA 764
Q++ SATY + F E + +P+ S+
Sbjct: 199 QVISSSATYPGDLEIFLESYMQSPILSS 226
>UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 542
Score = 48.4 bits (110), Expect = 3e-04
Identities = 28/92 (30%), Positives = 44/92 (47%)
Frame = +3
Query: 480 RTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIH 659
+ + K + I++ TPG++ D + F +K V+DEAD I G +++ +I
Sbjct: 195 KEEEALKKGASIVVATPGRLLDHIINTKCFIYRNLKCLVIDEAD-RIMEVGFEEEMRQIL 253
Query: 660 KCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
LP Q M FSAT V A I + P+
Sbjct: 254 NRLPKNRQTMLFSATQSEKVDDIANISLKQPV 285
Score = 37.9 bits (84), Expect = 0.39
Identities = 20/58 (34%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAF---VLAMLSRVD-SNKNYPQVLCLSPTYELAIQTGEVAAKM 432
++++A++++G+GKT AF ++ +L+++ +N + +SPT ELAIQT +V K+
Sbjct: 119 KDIMAKARTGSGKTLAFLIPIVEILNKIHFQTRNGTGAIIISPTRELAIQTFDVLEKI 176
>UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1;
Ureaplasma parvum|Rep: ATP-dependent RNA helicase -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 443
Score = 48.4 bits (110), Expect = 3e-04
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
+N+I + +GTGKT AFVL +L+ +D ++ QV+ ++PT ELA Q K P
Sbjct: 38 ENIIGVAPTGTGKTLAFVLPILNNLDLSQKL-QVIIITPTRELARQIFSKIIVFKKHQPL 96
Query: 451 IKLKYAVRGEELPR--GSKITVTFLLV 525
+++K + GE + + S++ + LL+
Sbjct: 97 LQVKMLIGGESIDQQINSQLNKSQLLI 123
>UniRef50_Q6YQC2 Cluster: Superfamily II DNA and RNA helicase; n=2;
Candidatus Phytoplasma asteris|Rep: Superfamily II DNA
and RNA helicase - Onion yellows phytoplasma
Length = 357
Score = 48.4 bits (110), Expect = 3e-04
Identities = 21/59 (35%), Positives = 37/59 (62%)
Frame = +1
Query: 262 DPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 438
+ P N++ + +GTGKT A++L +LS++D K + Q + L PT +L Q E+ ++ K
Sbjct: 29 EKPGNLVGIAPTGTGKTHAYLLPILSKIDFQKPFTQAIILVPTNDLVFQVWEMFKQIEK 87
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 48.4 bits (110), Expect = 3e-04
Identities = 29/80 (36%), Positives = 44/80 (55%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
I+IGTPG++ D K +K +++DEAD M++ G + RI + LP QMM
Sbjct: 125 IVIGTPGRILDL-FKEQALKPHFVKHYIIDEADQMLD-MGFLPEVDRIAQALPEKLQMMV 182
Query: 693 FSATYGTAVMQFAEIIVSNP 752
FSAT + F + ++NP
Sbjct: 183 FSATIPEKLQPFLKKYMNNP 202
Score = 41.9 bits (94), Expect = 0.024
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGE 417
+++I QSQ+GTGKT +F+L ++ V+ Q + ++PT ELA Q E
Sbjct: 40 RDIIGQSQTGTGKTLSFLLPIVQNVNPELQEMQAIIVAPTRELAWQIHE 88
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 48.4 bits (110), Expect = 3e-04
Identities = 28/89 (31%), Positives = 45/89 (50%)
Frame = +3
Query: 489 QGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 668
Q I++ TPG++ D ++ D+ +K VLDEAD M++ G D+ I
Sbjct: 120 QSLSKGCDIVVATPGRLLDL-MRKNALDLRGLKALVLDEADRMLDL-GFADELDDILDQT 177
Query: 669 PSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
P Q + FSAT+ V + E ++ NP+
Sbjct: 178 PGNVQTLLFSATFPDKVKELTEELLRNPV 206
Score = 46.4 bits (105), Expect = 0.001
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDS----NKNYPQVLCLSPTYELAIQTGEVAAKMAKF 441
++IA +++G+GKTA FVL +L ++ S N L L PT ELA+Q + + ++
Sbjct: 40 DLIAAAETGSGKTAGFVLPLLEKLHSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYSEN 99
Query: 442 CPEIKLKYAVRG 477
CP A+ G
Sbjct: 100 CPRKIRSVAIYG 111
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 48.4 bits (110), Expect = 3e-04
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
+LI TPG++ D + G+ + ++ V+DEAD M++ G RI LP Q +F
Sbjct: 347 VLIATPGRLIDLFDRGGLL-LTDTRILVIDEADRMLD-MGFIPDVERIVSLLPHNRQTLF 404
Query: 693 FSATYGTAVMQFAEIIVSNP 752
FSAT + + A+ + NP
Sbjct: 405 FSATMAPEIRRLADAFLQNP 424
Score = 42.7 bits (96), Expect = 0.014
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNK---NYPQVLCLSPTYELAIQTGEVAAKMAKF 441
++++ +Q+GTGKTA+F L M+ + + P+ L L PT ELA+Q VA K+
Sbjct: 261 RDVLGCAQTGTGKTASFTLPMMDILSDRRARARMPRSLILEPTRELALQ---VAENFVKY 317
Query: 442 CPEIKLKYAV 471
+KL +A+
Sbjct: 318 GQYLKLNHAL 327
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 48.4 bits (110), Expect = 3e-04
Identities = 23/55 (41%), Positives = 38/55 (69%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 435
++++ +Q+GTGKTAAF L +L+ VD+++ Q L L+PT ELA+Q+ + A
Sbjct: 83 RDVVGIAQTGTGKTAAFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAIEDFA 137
Score = 47.2 bits (107), Expect = 6e-04
Identities = 26/86 (30%), Positives = 45/86 (52%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K + +++GTPG++ D ++ G D+ +++ VLDEAD M+ R G + I P
Sbjct: 162 KRGAQVVVGTPGRVIDL-IEKGALDLSHVRMLVLDEADEML-RMGFAEDVETIASSAPDD 219
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNPL 755
FSAT A+ + A + +P+
Sbjct: 220 RLTALFSATMPAAIEKVAREHLKDPV 245
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 48.4 bits (110), Expect = 3e-04
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 5/61 (8%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYP-----QVLCLSPTYELAIQTGEVAAKMAK 438
+++ +Q+GTGKTAAFVL +L R+ +N+ P + L L+PT ELA Q + A K
Sbjct: 96 DLVGIAQTGTGKTAAFVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGK 155
Query: 439 F 441
F
Sbjct: 156 F 156
Score = 37.5 bits (83), Expect = 0.52
Identities = 25/80 (31%), Positives = 40/80 (50%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
+L+ TPG++ D V G+ + ++ VLDEAD M++ G +I LP Q +
Sbjct: 183 LLVATPGRLLDH-VAAGVIRLDAVETVVLDEADQMLD-LGFIPAIRQIMAKLPRQRQAVM 240
Query: 693 FSATYGTAVMQFAEIIVSNP 752
FSAT + A + +P
Sbjct: 241 FSATMPKPIRALAGEFLRDP 260
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 48.4 bits (110), Expect = 3e-04
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +3
Query: 474 RGRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIR 653
+G K+ I+IGTPG+M D ++ G+ + + VLDEAD M++ G + +
Sbjct: 270 KGPQISALKSGVDIVIGTPGRMKDL-IEMGICRLNDVSFVVLDEADRMLD-MGFEPEVRA 327
Query: 654 IHKCLPSTCQMMFFSATYGTAVMQFA-EIIVSNPL 755
I S Q + FSAT+ AV Q A E + NP+
Sbjct: 328 ILSQTASVRQTVMFSATWPPAVHQLAQEFMDPNPI 362
Score = 35.1 bits (77), Expect = 2.8
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRV-------DSNKNYPQVLCLSPTYELAIQTGEVAAK 429
++ I + +G+GKT AF + L V + K P+VL LSPT ELA Q +V +
Sbjct: 130 RDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRVLVLSPTRELAQQIADVLCE 189
Query: 430 MAKFC 444
C
Sbjct: 190 AGAPC 194
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 48.4 bits (110), Expect = 3e-04
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Frame = +3
Query: 477 GRTSQGFKNHSH---ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQC 647
G+ + KN H I+I TPG++ + +FD +K+ VLDEAD ++ G +
Sbjct: 171 GQNLKAEKNRLHQLNIIICTPGRLLQHMDQNPLFDCTNLKILVLDEADRCLD-LGFESAM 229
Query: 648 IRIHKCLPSTCQMMFFSATYGTAVMQFAEIIVSNP 752
I + LPS Q + FSAT +V A + + NP
Sbjct: 230 NAIIENLPSERQTLLFSATQTKSVKDLARLNLRNP 264
Score = 37.1 bits (82), Expect = 0.69
Identities = 19/60 (31%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNK----NYPQVLCLSPTYELAIQTGEVAAKMAK 438
++++A +++G+GKT AF++ + ++ +N+ + L ++PT ELA+Q E AK+ K
Sbjct: 100 KDILAAAKTGSGKTLAFLIPVFEKLYTNQWTKLDGLGALIITPTRELALQIFETVAKIGK 159
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 48.4 bits (110), Expect = 3e-04
Identities = 27/74 (36%), Positives = 44/74 (59%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
+++G+PG + ++ G + +K+ VLDEAD+++++ Q RI K L S QM+F
Sbjct: 165 VVVGSPGTILKL-MELGKLNYKGVKMIVLDEADILLDKDMMGTQTFRILK-LISGAQMIF 222
Query: 693 FSATYGTAVMQFAE 734
FSAT+ V Q E
Sbjct: 223 FSATFSEQVKQTIE 236
Score = 43.6 bits (98), Expect = 0.008
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA-----K 438
N++ QS+SGTGKT A+ +L + QV+ ++PT EL+ Q EV + +A K
Sbjct: 90 NVVVQSKSGTGKTIAYTCGVLGNTKIGER-TQVMVVTPTRELSTQVTEVISGLAGPLGIK 148
Query: 439 FCPEIKLKYAVR-GEELPRGSKITVTFLLVLQERCLIGVSSL 561
+K K GEE+ GS T+ L+ L + GV +
Sbjct: 149 VFSALKNKITDSIGEEVVVGSPGTILKLMELGKLNYKGVKMI 190
Score = 34.7 bits (76), Expect = 3.7
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 89 VESKLDIEIQR--KDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALP 250
+E+ LD I D L + F + L LLK +Y GF PS IQ++A+P
Sbjct: 28 IETGLDGSISGVGTDRGQKLLVAEHFSDMGLSDELLKAIYNQGFEKPSLIQKSAIP 83
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 48.4 bits (110), Expect = 3e-04
Identities = 28/81 (34%), Positives = 46/81 (56%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
+ +GTPG++ D +K G ++ +++ VLDEAD M+ +D I + K LP Q M
Sbjct: 229 VAVGTPGRVIDL-MKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEK-LPEKRQSMM 286
Query: 693 FSATYGTAVMQFAEIIVSNPL 755
FSAT + + + ++NPL
Sbjct: 287 FSATMPSWIRSLTKKYLNNPL 307
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 48.4 bits (110), Expect = 3e-04
Identities = 28/94 (29%), Positives = 47/94 (50%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
++I TPG+ D F + +++ VLDEAD M+ G D+ I LP + Q M
Sbjct: 400 VVIATPGRFIDHMRNSASFAVETVEILVLDEADRML-EDGFADELNEILTTLPKSRQTML 458
Query: 693 FSATYGTAVMQFAEIIVSNPL*SAFERRRITGIT 794
FSAT + V + + ++ P + ++ T +T
Sbjct: 459 FSATMTSTVDKLIRVGLNKPARIMVDSQKQTAVT 492
Score = 45.2 bits (102), Expect = 0.003
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSN-KNYP--QVLCLSPTYELAIQTGEVAAKMAKF 441
++++ + +G+GKTAAFV+ +L R+ K P +V+ L+PT ELAIQ VA K+A
Sbjct: 314 KDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASH 373
Query: 442 CPEIKLKYAVRGEEL 486
+IK AV G L
Sbjct: 374 -TDIKFCLAVGGLSL 387
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 48.4 bits (110), Expect = 3e-04
Identities = 23/77 (29%), Positives = 42/77 (54%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI 453
+++ Q++SG GKTA FVLA L +++ VL + T ELA Q + + +K+ P +
Sbjct: 83 DVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSV 142
Query: 454 KLKYAVRGEELPRGSKI 504
K+ G + + ++
Sbjct: 143 KVSVFFGGLSIKKDEEV 159
Score = 48.0 bits (109), Expect = 4e-04
Identities = 26/86 (30%), Positives = 42/86 (48%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
KN H+++GTPG++ V+ F + +K FVLDE D M+ + + I + P
Sbjct: 162 KNCPHVVVGTPGRILAL-VRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHE 220
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNPL 755
Q M FSAT + + +P+
Sbjct: 221 KQCMMFSATLSKDIRPVCRKFMQDPM 246
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 48.4 bits (110), Expect = 3e-04
Identities = 25/83 (30%), Positives = 46/83 (55%)
Frame = +3
Query: 507 SHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQM 686
S +++ TPG++ D ++ G D+ ++ VLDEAD M+ + +D I + S Q
Sbjct: 232 SQVVVATPGRLLDL-LQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQT 290
Query: 687 MFFSATYGTAVMQFAEIIVSNPL 755
+ F+AT+ V + A ++NP+
Sbjct: 291 LMFTATWPKEVRELASTFMNNPI 313
Score = 35.5 bits (78), Expect = 2.1
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRV--DSNKNYPQVLCLSPTYELAIQ 408
++++ +++G+GKT AF + +S + D K QVL +SPT ELA Q
Sbjct: 150 KDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELASQ 197
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 48.0 bits (109), Expect = 4e-04
Identities = 22/45 (48%), Positives = 34/45 (75%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQ 408
++IAQ+QSGTGKTA F +++L +++ ++ Q L L+PT ELA Q
Sbjct: 74 DVIAQAQSGTGKTATFAISILQQLEIDQKETQALVLAPTRELAQQ 118
Score = 37.9 bits (84), Expect = 0.39
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +2
Query: 158 FEALHLKPNLLKGVYAMGFNAPSKIQETAL 247
F+ ++LK +LL+G+YA GF PS IQ+ A+
Sbjct: 37 FDDMNLKESLLRGIYAYGFEKPSAIQQRAI 66
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 48.0 bits (109), Expect = 4e-04
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 438
++I Q+Q+GTGKTAAF + ++ +V + + + Q L L+PT ELAIQ K++K
Sbjct: 45 DVIGQAQTGTGKTAAFGIPVVEKVSTGR-HVQALILTPTRELAIQVSGEIQKLSK 98
Score = 42.3 bits (95), Expect = 0.018
Identities = 26/99 (26%), Positives = 50/99 (50%)
Frame = +3
Query: 489 QGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 668
+ K ++IGTPG++ D ++ + + +LDEAD M++ G D I + +
Sbjct: 118 KALKQGVQVVIGTPGRIID-HLRRKTLILDHVNTVILDEADEMLD-MGFIDDIESILRQV 175
Query: 669 PSTCQMMFFSATYGTAVMQFAEIIVSNPL*SAFERRRIT 785
+ Q + FSAT A+ + + +++P + RR +T
Sbjct: 176 KNERQTLLFSATMPPAIKKLSRKYMNDPQTVSINRREVT 214
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 48.0 bits (109), Expect = 4e-04
Identities = 21/51 (41%), Positives = 37/51 (72%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQ 408
LA +++I QS +G+GKT A++L + ++D++K Q + L+PT+ELA+Q
Sbjct: 36 LALENKDVIGQSPTGSGKTLAYLLPIFQKIDTSKREMQAIILAPTHELAMQ 86
>UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=1;
Limnobacter sp. MED105|Rep: Putative ATP-dependent RNA
helicase - Limnobacter sp. MED105
Length = 617
Score = 48.0 bits (109), Expect = 4e-04
Identities = 24/82 (29%), Positives = 46/82 (56%)
Frame = +3
Query: 507 SHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQM 686
+ I++GTPG++ D + G ++ + ++DEAD M++ G + I + + Q
Sbjct: 127 ARIVVGTPGRLLDLAQQ-GKLNLSTVTTLIVDEADRMLDL-GFSEDLEAIDQLCGNRIQT 184
Query: 687 MFFSATYGTAVMQFAEIIVSNP 752
+ FSAT+ ++ AE I++NP
Sbjct: 185 LMFSATFAKRIIGLAENIMNNP 206
Score = 40.3 bits (90), Expect = 0.074
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNY-------PQVLCLSPTYELAIQTGEVAAKM 432
+++ SQ+G+GKT F+L ++ R+ + + P+ L L PT ELA Q + A +
Sbjct: 40 DLMVSSQTGSGKTFGFLLPVMHRMMTGEQSPMEMLAGPECLVLCPTRELAQQVSQDAINL 99
Query: 433 AKFCPEIKLKYAVRGEELPRGSKI 504
KF +++ V G +P G ++
Sbjct: 100 VKFTKGVRVATVVGG--MPYGKQM 121
>UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=1;
Encephalitozoon cuniculi|Rep: PUTATIVE ATP-DEPENDENT RNA
HELICASE - Encephalitozoon cuniculi
Length = 503
Score = 48.0 bits (109), Expect = 4e-04
Identities = 30/93 (32%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Frame = +3
Query: 435 KILS*NKVKVCS*RGRTSQGFKNHS--HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEA 608
K+++ ++++V S G+ Q ++S I++ TPG++ D + D+ +I++FVLDEA
Sbjct: 186 KLVAGSRIRVVSIYGK-KQDLPSYSGVDIVVATPGRLIDL-LHRKKVDLSEIRMFVLDEA 243
Query: 609 DVMINRQGHQDQCIRIHKCLPSTCQMMFFSATY 707
D +++ G + IH +P Q FSATY
Sbjct: 244 DKLLD-MGFEIPIREIHGFVPKNTQTCLFSATY 275
Score = 36.3 bits (80), Expect = 1.2
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKM 432
+N+I ++ +G GKT F++ ++ R K PQ +SPT EL Q A+K+
Sbjct: 135 RNLICRAPTGMGKTMCFLIPIIERHRQMKK-PQACIISPTRELCEQIRVEASKL 187
>UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4;
Ascomycota|Rep: 2-isopropylmalate synthase - Ajellomyces
capsulatus NAm1
Length = 1466
Score = 48.0 bits (109), Expect = 4e-04
Identities = 27/86 (31%), Positives = 42/86 (48%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K ++I TPG+ D F + +++ VLDEAD M+ G D+ I +P +
Sbjct: 424 KKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRML-EDGFADELNEILTTIPKS 482
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNPL 755
Q M FSAT V + + +S P+
Sbjct: 483 RQTMLFSATMTNNVDKLIRVGLSRPV 508
Score = 39.1 bits (87), Expect = 0.17
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSR-VDSNKNYP--QVLCLSPTYELAIQTGEVAAKMAKF 441
++++ + +G+GKT AF++ +L R + + P +V L PT ELA+Q VA K+A F
Sbjct: 343 KDVVGGAVTGSGKTGAFIIPILERLLYRPRKVPTSRVAILMPTRELAVQCYNVATKLATF 402
Score = 36.7 bits (81), Expect = 0.91
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 116 QRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALP 250
++ N L S K+F+A L +L+G+ ++GF P+ IQ +P
Sbjct: 293 EKPSANGDLKSAKSFQAFSLSRPILRGLTSVGFTTPTPIQRKTIP 337
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 48.0 bits (109), Expect = 4e-04
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +3
Query: 504 HSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLP--ST 677
H IL+ TPG++ D+ + G + ++V VLDEAD M++ G Q +I + P S
Sbjct: 135 HCDILVATPGRLLDFNQR-GEVHLDMVEVMVLDEADRMLD-MGFIPQVRQIIRQTPPKSE 192
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNP 752
Q + FSAT+ VM A+ +NP
Sbjct: 193 RQTLLFSATFTDDVMNLAKQWTTNP 217
Score = 45.6 bits (103), Expect = 0.002
Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 7/71 (9%)
Frame = +1
Query: 250 YTLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDS----NKNY---PQVLCLSPTYELAIQ 408
YTL Q+ I ++Q+GTGKTAAF+++++S++ + Y P+ L ++PT EL +Q
Sbjct: 42 YTLRG--QDAIGRAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIAPTRELVVQ 99
Query: 409 TGEVAAKMAKF 441
+ AA + K+
Sbjct: 100 IAKDAAALTKY 110
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 48.0 bits (109), Expect = 4e-04
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMI---NRQGHQDQCIRIHKCLPSTC 680
HI IG+PG++ ++ G + I++FVLDEAD ++ + Q+Q I+ LP+
Sbjct: 146 HIAIGSPGRIKQL-IEMGALMVSSIRLFVLDEADKLLEDDSSSSFQEQINWIYSSLPANK 204
Query: 681 QMMFFSATYGTAVMQ 725
QM+ SATY ++ Q
Sbjct: 205 QMLALSATYPESLAQ 219
Score = 39.5 bits (88), Expect = 0.13
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQ 408
++I Q++SGTGKT F L + QVL L+PT E+A+Q
Sbjct: 65 DLIVQAKSGTGKTCVFTTIALDSLILENATTQVLVLAPTREIAVQ 109
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 47.6 bits (108), Expect = 5e-04
Identities = 23/76 (30%), Positives = 44/76 (57%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI 453
++I +++SGTGKT F + L +D + + QVL L+PT E+A+Q +V + + ++
Sbjct: 35 DLIMRAKSGTGKTLVFCIISLEMIDIDISSVQVLILAPTREIAVQIAQVFSSVGCEIKDL 94
Query: 454 KLKYAVRGEELPRGSK 501
K++ + G + K
Sbjct: 95 KVEVFIGGLAIENDKK 110
Score = 37.1 bits (82), Expect = 0.69
Identities = 24/85 (28%), Positives = 44/85 (51%)
Frame = +3
Query: 501 NHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTC 680
N+ I +G PG++ + G + +++FVLDEAD ++ +D I LP +
Sbjct: 113 NNCQIAVGAPGRIRHL-IDKGFLKVENVRLFVLDEADKLMETSFQKD-INYIFSKLPLSK 170
Query: 681 QMMFFSATYGTAVMQFAEIIVSNPL 755
Q++ SATY + F + + +P+
Sbjct: 171 QVIASSATYPGDLEIFLQTYMCSPV 195
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 47.6 bits (108), Expect = 5e-04
Identities = 25/71 (35%), Positives = 41/71 (57%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI 453
++I +S+SGTGKT F L V++ K++ QVL L PT E+A+Q +V + +
Sbjct: 63 DLIVKSKSGTGKTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGL 122
Query: 454 KLKYAVRGEEL 486
K++ + G L
Sbjct: 123 KIESFIGGRPL 133
Score = 45.6 bits (103), Expect = 0.002
Identities = 27/81 (33%), Positives = 41/81 (50%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
HI +G PG++ +K G +K+FVLDEAD ++ + Q I+ LP QM+
Sbjct: 144 HIAVGAPGRVKHL-LKMGALTTNLVKLFVLDEADKLM-EESFQSDINEIYNSLPPRKQMI 201
Query: 690 FFSATYGTAVMQFAEIIVSNP 752
SATY + F + +P
Sbjct: 202 VSSATYPQELDTFLANYMQSP 222
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 47.6 bits (108), Expect = 5e-04
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = +1
Query: 265 PPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQ 408
P Q++I Q++SGTGKT F + L +D QVL L+PT E+A+Q
Sbjct: 2 PVQDLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQ 49
Score = 45.6 bits (103), Expect = 0.002
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
HI +GTPG++ +++ + G I++FVLDEAD +++ Q+Q I+ L QM+
Sbjct: 86 HIAVGTPGRIKQL-IEYEVLKTGTIRLFVLDEADKLLD-DTFQEQVNWIYNHLSDNKQML 143
Query: 690 FFSATY 707
SATY
Sbjct: 144 ALSATY 149
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 47.6 bits (108), Expect = 5e-04
Identities = 30/81 (37%), Positives = 45/81 (55%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
ILI TPG++ D G ++ K V VLDEAD M++ G RI + LP+ Q+M
Sbjct: 130 ILIATPGRLLDHLFN-GNVNISKTGVLVLDEADRMLD-MGFWPDLQRILRRLPNDKQIML 187
Query: 693 FSATYGTAVMQFAEIIVSNPL 755
FSAT+ + A ++ +P+
Sbjct: 188 FSATFEKRIKTIAYKLMDSPV 208
Score = 40.3 bits (90), Expect = 0.074
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNK--NYPQVLCLSPTYELAIQ 408
++++A +Q+GTGKTAAF L ++ V K P L L PT ELA Q
Sbjct: 45 KDLLAAAQTGTGKTAAFGLPIIQAVQQKKRNGTPHALILVPTRELAQQ 92
>UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=2; Enterococcus|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 433
Score = 47.6 bits (108), Expect = 5e-04
Identities = 28/82 (34%), Positives = 49/82 (59%)
Frame = +1
Query: 247 SYTLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAA 426
S+T +N++ S +GTGKT A++L +L V+ + Q+L ++P+ ELA+Q EVA
Sbjct: 30 SFTPLREGENVLGISPTGTGKTLAYMLPLLLTVEKGQG-NQLLIIAPSQELAMQIAEVAR 88
Query: 427 KMAKFCPEIKLKYAVRGEELPR 492
AK ++K++ + G + R
Sbjct: 89 TWAKPL-QLKVQTLIGGANVSR 109
>UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep:
SrmB - Mycoplasma gallisepticum
Length = 457
Score = 47.6 bits (108), Expect = 5e-04
Identities = 25/64 (39%), Positives = 37/64 (57%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
+N+I + +GTGKT AF+L +L +D +N Q + + PT ELA Q V A K
Sbjct: 39 KNLIGVAPTGTGKTLAFLLPILQNLDFAQNLIQAVIIVPTRELANQIKSVLANFVKTNKA 98
Query: 451 IKLK 462
I++K
Sbjct: 99 IRIK 102
>UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2;
Corynebacterium|Rep: Putative RNA helicase -
Corynebacterium diphtheriae
Length = 452
Score = 47.6 bits (108), Expect = 5e-04
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
IL+ TPG+ D + G + ++++ LDEAD M + G Q ++ + P T Q +F
Sbjct: 127 ILVATPGRAQDL-INQGKLSLSEVEISTLDEADQMAD-MGFLPQVTKLLELTPKTAQRLF 184
Query: 693 FSATYGTAVMQFAEIIVSNPL 755
FSAT V + + +S+P+
Sbjct: 185 FSATLDGDVNKLVDRFMSDPV 205
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 47.6 bits (108), Expect = 5e-04
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 513 ILIGTPGKMFDW-GVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
ILI TPG++ D G K D ++++FVLDEAD M++ G +I LP +
Sbjct: 130 ILIATPGRLMDLHGQKHLKLD--RVEIFVLDEADRMLD-MGFMQDIKKILPLLPQKRHNL 186
Query: 690 FFSATYGTAVMQFAEIIVSNP 752
FFSAT + A I+ NP
Sbjct: 187 FFSATMPHEIQTLANRILVNP 207
Score = 39.9 bits (89), Expect = 0.098
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSN-----KNYPQVLCLSPTYELAIQTGEVAAKMAK 438
+++ +Q+GTGKTAAF L +L + + P+ L L+PT ELAIQ E +
Sbjct: 43 DLLGIAQTGTGKTAAFSLPILQNLSKHTRKIEPKSPRCLILTPTRELAIQIHE---NIEA 99
Query: 439 FCPEIKLKYAV 471
+ + +K+AV
Sbjct: 100 YSKHLNMKHAV 110
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 47.6 bits (108), Expect = 5e-04
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAK 438
+ I + +GTGKTAAF + ++ +DS Q L LSPT ELA+Q E + K
Sbjct: 84 DFIGLASTGTGKTAAFGIPLIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGK 138
Score = 42.3 bits (95), Expect = 0.018
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Frame = +3
Query: 492 GFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRI----- 656
G K +HI++ TPG++ D+ ++ M + +K VLDEAD M++ G ++ I
Sbjct: 159 GIKRGAHIVVATPGRLVDF-LEQKMIKLQSVKTVVLDEADEMLS-MGFKEALETILSATQ 216
Query: 657 ---HKCLPSTCQMMFFSATYGTAVMQFAEIIVSNP 752
+ + C+ FSAT + V + + NP
Sbjct: 217 PDDSDSVRAACRTWLFSATMSSEVRRLTSTYLENP 251
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 47.6 bits (108), Expect = 5e-04
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = +1
Query: 283 AQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEIKLK 462
A++++G+GKTAAF + +L R+ + Q L L PT ELA Q + ++A+F IK+
Sbjct: 46 AKAKTGSGKTAAFGIGLLDRIVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKIL 105
Query: 463 YAVRGEELPRGSKI 504
G+ P G ++
Sbjct: 106 TLCGGQ--PMGQQL 117
Score = 47.6 bits (108), Expect = 5e-04
Identities = 28/81 (34%), Positives = 43/81 (53%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
HI++GTPG++ D ++ + +KV VLDEAD M++ G D + PS Q +
Sbjct: 125 HIVVGTPGRIQD-HLRKQSLALDSLKVLVLDEADRMLD-MGFTDAIDDVISYTPSDRQTL 182
Query: 690 FFSATYGTAVMQFAEIIVSNP 752
FSATY + Q + + P
Sbjct: 183 LFSATYPQEIEQISARVQRQP 203
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 47.6 bits (108), Expect = 5e-04
Identities = 25/69 (36%), Positives = 41/69 (59%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K H HI++GTPG++F+ +K M ++K VLDE D ++ + H++ +I K
Sbjct: 120 KKHPHIIVGTPGRVFEL-IKAKKLKMHEVKTIVLDETDQLVLPE-HRETMKQIIKTTLRD 177
Query: 678 CQMMFFSAT 704
Q++ FSAT
Sbjct: 178 RQLLCFSAT 186
Score = 47.2 bits (107), Expect = 6e-04
Identities = 20/50 (40%), Positives = 35/50 (70%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEV 420
+++IA+S +GTGKT A+ L +L R+ + +PQ + L+P+ EL +Q +V
Sbjct: 42 KDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSRELVMQIFQV 91
>UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;
n=1; uncultured marine bacterium 66A03|Rep: Putative
cold-shock dead-box protein A - uncultured marine
bacterium 66A03
Length = 659
Score = 47.6 bits (108), Expect = 5e-04
Identities = 26/76 (34%), Positives = 45/76 (59%)
Frame = +3
Query: 507 SHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQM 686
+HI++GTPG++ D ++ G+ + IK VLDEAD M++ +D + K P +
Sbjct: 125 AHIVVGTPGRLRDH-IERGVLRLSDIKAVVLDEADEMLDMGFREDLTFILGKA-PVERRT 182
Query: 687 MFFSATYGTAVMQFAE 734
+ FSAT T +++ A+
Sbjct: 183 LLFSATVPTQIVKLAK 198
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 47.6 bits (108), Expect = 5e-04
Identities = 24/80 (30%), Positives = 45/80 (56%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
+L+ PG++ D + G D+ ++++ VLDEAD M++ G ++ LP+ Q +
Sbjct: 132 VLVACPGRLLDLAGQ-GSVDLSRVEILVLDEADRMLD-MGFIHDVKKVLARLPAKRQNLL 189
Query: 693 FSATYGTAVMQFAEIIVSNP 752
FSAT+ + A+ ++ NP
Sbjct: 190 FSATFSKDITDLADKLLHNP 209
Score = 35.1 bits (77), Expect = 2.8
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 10/56 (17%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRV------DSNKNY----PQVLCLSPTYELAIQ 408
++++ +Q+GTGKT F L +L R+ D ++ + P+VL L+PT ELA Q
Sbjct: 39 RDLMVAAQTGTGKTGGFALPILERLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQ 94
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 47.6 bits (108), Expect = 5e-04
Identities = 28/108 (25%), Positives = 56/108 (51%)
Frame = +3
Query: 486 SQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKC 665
+Q K + I++ TPG++ + V + + ++ VLDEAD M++ G +I +
Sbjct: 118 AQKLKQGADIIVATPGRLLEHIVACNL-SLSNVEFLVLDEADRMLD-MGFSTDIQKILQA 175
Query: 666 LPSTCQMMFFSATYGTAVMQFAEIIVSNPL*SAFERRRITGIT*NHIM 809
+ Q + FSAT+ TAV + A ++ P + +++ T T + ++
Sbjct: 176 VNKKRQNLLFSATFSTAVKKLANDMLDKPKIISADKQNTTAATVSQVV 223
Score = 38.7 bits (86), Expect = 0.23
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 11/91 (12%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDS-----NKNYPQVLCLSPTYELAIQTGEVAAKMA 435
++++A +Q+GTGKTAAF L +L ++ + + L L+PT ELA Q + + +
Sbjct: 39 EDVLASAQTGTGKTAAFALPILQKMHERPMTVQHSNARALILTPTRELAAQVADNISAYS 98
Query: 436 KFCPEIKL------KYAVRGEELPRGSKITV 510
K L K A + ++L +G+ I V
Sbjct: 99 KHMNISVLTIYGGMKMATQAQKLKQGADIIV 129
>UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinomonas sp. MWYL1|Rep: DEAD/DEAH box helicase
domain protein - Marinomonas sp. MWYL1
Length = 452
Score = 47.6 bits (108), Expect = 5e-04
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 7/64 (10%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLS-------RVDSNKNYPQVLCLSPTYELAIQTGEVAAKM 432
++I Q+Q+GTGKTAAF++AM+S N+ + L ++PT ELAIQ + A K+
Sbjct: 110 DIIGQAQTGTGKTAAFLIAMISDFLDYPLEEKRANNFARGLIIAPTRELAIQIADEAVKL 169
Query: 433 AKFC 444
C
Sbjct: 170 TSNC 173
Score = 40.7 bits (91), Expect = 0.056
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLP--STCQM 686
IL+ TPG++ D+ + +GK++ VLDEAD M++ G I + P T Q
Sbjct: 200 ILVATPGRLLDFA-RSRKVQLGKVECLVLDEADRMLS-MGFIPDVKSIIRMTPHKETRQT 257
Query: 687 MFFSATYGTAVMQFAE 734
M FSAT+ + A+
Sbjct: 258 MLFSATFPKDIQALAQ 273
>UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 637
Score = 47.6 bits (108), Expect = 5e-04
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Frame = +3
Query: 501 NHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST- 677
+H+ ++IGTPG++ + ++ G + + K+ VLDEAD M+ G ++Q ++I LP+
Sbjct: 232 SHAFLVIGTPGRL-NAVLESGALKLDRCKILVLDEADRML-ALGFEEQLLKIRDALPNAN 289
Query: 678 --CQMMFFSATYGTAV 719
Q + FSAT+ AV
Sbjct: 290 DGRQTLLFSATFPKAV 305
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 47.6 bits (108), Expect = 5e-04
Identities = 23/58 (39%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYP-QVLCLSPTYELAIQTGEVAAKMAKF 441
++++A S++G+GKTAAFV+ ML ++ + L +SPT ELA+QT +V ++ +F
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRF 119
Score = 42.7 bits (96), Expect = 0.014
Identities = 25/81 (30%), Positives = 44/81 (54%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
IL+ TPG++ V+ + + ++ V DEAD + G QDQ K +P + Q +
Sbjct: 146 ILLATPGRLLHVIVEMDL-RLSYVQYVVFDEADRLFE-MGFQDQLTETLKRIPESRQTLL 203
Query: 693 FSATYGTAVMQFAEIIVSNPL 755
FSAT ++ FA+ +++P+
Sbjct: 204 FSATLPKMLVDFAKAGLTDPM 224
>UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5;
Trypanosomatidae|Rep: DEAD box RNA helicase, putative -
Leishmania major
Length = 527
Score = 47.6 bits (108), Expect = 5e-04
Identities = 27/92 (29%), Positives = 48/92 (52%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
H+++GTPG++ D F + K+ VLDEAD M++ ++ + I + LP + M
Sbjct: 175 HVVVGTPGRVKDHLSNTKGFKLVKLHALVLDEADKMLD-MNYEKEIDAILEQLPQNRRTM 233
Query: 690 FFSATYGTAVMQFAEIIVSNPL*SAFERRRIT 785
FSAT T + + + + +P+ R+ T
Sbjct: 234 LFSATLSTKIDRLQKASLRDPVLLQVHRKNTT 265
>UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ATP-dependent RNA helicase -
Ornithorhynchus anatinus
Length = 580
Score = 47.2 bits (107), Expect = 6e-04
Identities = 23/74 (31%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYP--QVLCLSPTYELAIQTGEVAAKMAKFC 444
++++A +++G+GKTA F++ M ++ ++ + L LSPT ELA+QTG+ ++ KF
Sbjct: 188 KDVVAMARTGSGKTACFLIPMFEKLKAHSAQAGARALVLSPTRELALQTGKFTKELGKF- 246
Query: 445 PEIKLKYAVRGEEL 486
+K+ + G+ +
Sbjct: 247 TGLKMALILGGDRM 260
>UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 440
Score = 47.2 bits (107), Expect = 6e-04
Identities = 23/71 (32%), Positives = 41/71 (57%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
+N++ QSQSG+GKT AF+L+ L ++ + QV+ + T ELA QT + ++ + +
Sbjct: 63 KNLVMQSQSGSGKTMAFLLSTLQLINRKDPFCQVIIIVNTRELARQTASIFDELTELMDD 122
Query: 451 IKLKYAVRGEE 483
+ + G E
Sbjct: 123 VTRLLCLPGYE 133
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 47.2 bits (107), Expect = 6e-04
Identities = 28/92 (30%), Positives = 48/92 (52%)
Frame = +3
Query: 477 GRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRI 656
GR + +L+ TPG++ D G+ +G ++ VLDEAD M++ G + +I
Sbjct: 130 GRQVRSLMQGVEVLVATPGRLLDLVQSNGL-KLGSVEFLVLDEADRMLD-MGFINDIRKI 187
Query: 657 HKCLPSTCQMMFFSATYGTAVMQFAEIIVSNP 752
LP Q +FFSAT + + A+ ++ +P
Sbjct: 188 VAKLPIKRQTLFFSATMPKDIAELADSMLRDP 219
Score = 39.1 bits (87), Expect = 0.17
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQ-----VLCLSPTYELAIQTGEVAAKMA 435
++++ +Q+GTGKTA+F L +L R+ ++ PQ VL LSPT EL +G++
Sbjct: 54 RDVVGIAQTGTGKTASFALPILHRLLEHRIKPQPKTTRVLVLSPTREL---SGQILDSFN 110
Query: 436 KFCPEIKLKYAVRGEELPRGSKI 504
+ I+L + +P G ++
Sbjct: 111 AYGRHIRLSSTLAIGGVPMGRQV 133
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 47.2 bits (107), Expect = 6e-04
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNY--PQVLCLSPTYELAIQTGEVAAKMAKFC 444
+++I Q+++GTGKTAAF + +L ++DS ++ PQ + + PT ELA Q A ++A+
Sbjct: 82 KDVIGQARTGTGKTAAFSIPILEQLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGV 141
Query: 445 P 447
P
Sbjct: 142 P 142
Score = 43.6 bits (98), Expect = 0.008
Identities = 28/92 (30%), Positives = 47/92 (51%)
Frame = +3
Query: 480 RTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIH 659
R + +N + +++GTPG++ D ++ G + VLDEAD M++ G + Q RI
Sbjct: 156 RQLRQLENGTQLVVGTPGRVHD-HLQRGTLRTNNVWCVVLDEADRMLD-IGFRPQIERIM 213
Query: 660 KCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
+ P Q + SAT V + AE + P+
Sbjct: 214 RKCPRNRQTLLLSATLPPVVRRLAESYMHEPV 245
>UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1;
Lactobacillus salivarius subsp. salivarius UCC118|Rep:
ATP-dependent RNA helicase - Lactobacillus salivarius
subsp. salivarius (strain UCC118)
Length = 426
Score = 47.2 bits (107), Expect = 6e-04
Identities = 25/75 (33%), Positives = 39/75 (52%)
Frame = +3
Query: 480 RTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIH 659
R + K H ++IGTPG++ + + + KI+ V+DEAD M+ + + I
Sbjct: 103 RQIEKLKKHPEVVIGTPGRLLNL-INLKKLKLHKIESIVIDEADEMLGDEDSLNDVREIV 161
Query: 660 KCLPSTCQMMFFSAT 704
PS Q+ FFSAT
Sbjct: 162 SHCPSEAQISFFSAT 176
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 47.2 bits (107), Expect = 6e-04
Identities = 26/77 (33%), Positives = 46/77 (59%)
Frame = +3
Query: 489 QGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 668
Q ++ + +++ TPG++ D+ + + D+ ++++ VLDEAD M++ G RI + L
Sbjct: 141 QSIRSGARVVVATPGRLEDYMGR-RLVDLSQVEMLVLDEADRMMD-MGFLPAIKRILRAL 198
Query: 669 PSTCQMMFFSATYGTAV 719
P Q + FSAT G AV
Sbjct: 199 PRDKQTLCFSATMGPAV 215
Score = 39.5 bits (88), Expect = 0.13
Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRV-DSNKNYPQVLCLSPTYELAIQ 408
++++A +Q+GTGKT AF++ L + D+ QVL L PT ELA+Q
Sbjct: 65 RDILATAQTGTGKTLAFIIPALEMLRDTEPCGVQVLILVPTRELAMQ 111
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 47.2 bits (107), Expect = 6e-04
Identities = 26/89 (29%), Positives = 50/89 (56%)
Frame = +3
Query: 489 QGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 668
Q ++ +L+ TPG++ D V+ + ++++ VLDEAD M++ G +I L
Sbjct: 118 QKLRHGVDVLVATPGRLLDL-VQQNVVKFNQLEILVLDEADRMLD-MGFIRDIKKILALL 175
Query: 669 PSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
P+ Q + FSAT+ + + A+ +V+ P+
Sbjct: 176 PAKRQNLMFSATFSDEIRELAKGLVNQPV 204
Score = 40.3 bits (90), Expect = 0.074
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVD-SNK---NYPQVLCLSPTYELAIQTGEVAAKMAK 438
++++A +Q+GTGKTA F L +L + NK + L L+PT ELA Q E K
Sbjct: 39 KDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGK 98
Query: 439 FCP 447
+ P
Sbjct: 99 YLP 101
>UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=1; Hyphomonas neptunium ATCC 15444|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family -
Hyphomonas neptunium (strain ATCC 15444)
Length = 708
Score = 47.2 bits (107), Expect = 6e-04
Identities = 28/83 (33%), Positives = 44/83 (53%)
Frame = +3
Query: 507 SHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQM 686
+HI++GTPG++ D + G FD I+ VLDEAD M++ G +++ I + P +
Sbjct: 126 AHIVVGTPGRLVDH-INRGSFDTSAIRAVVLDEADEMLD-LGFREELELILEDTPKERRT 183
Query: 687 MFFSATYGTAVMQFAEIIVSNPL 755
+ FSAT + A N L
Sbjct: 184 LMFSATVPKGIAALATRYQKNGL 206
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 47.2 bits (107), Expect = 6e-04
Identities = 22/57 (38%), Positives = 37/57 (64%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 441
+++ +Q+GTGKTAAF L +L ++ +++ + L L PT ELA+Q E K +K+
Sbjct: 171 RDVTGSAQTGTGKTAAFALPILHKLGAHERRLRCLVLEPTRELALQVEEAFQKYSKY 227
Score = 46.0 bits (104), Expect = 0.001
Identities = 29/109 (26%), Positives = 52/109 (47%)
Frame = +3
Query: 477 GRTSQGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRI 656
G+ + + ++ TPG++ D ++ G + +++ VLDE D M++ G RI
Sbjct: 242 GKQREDLQRGVDVVAATPGRLLDH-IEQGTMTLADVEILVLDEVDRMLD-MGFLPDVKRI 299
Query: 657 HKCLPSTCQMMFFSATYGTAVMQFAEIIVSNPL*SAFERRRITGIT*NH 803
+ P Q +FFSAT + Q A + +P+ +RR T +H
Sbjct: 300 VQQCPQARQTLFFSATLPPELAQLASWALRDPVEIKIGQRRSPAETISH 348
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 47.2 bits (107), Expect = 6e-04
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
++M+A +Q+GTGKTAAF +L +D++ Q L ++PT EL +Q AK
Sbjct: 40 RDMVALAQTGTGKTAAFGFPLLQNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKG 99
Query: 451 IKLKYAVRG-------EELPRGSKITV 510
+++ G E+ RG++I V
Sbjct: 100 VRVVAVYGGSNIQEQAREISRGAQIVV 126
Score = 42.7 bits (96), Expect = 0.014
Identities = 28/83 (33%), Positives = 42/83 (50%)
Frame = +3
Query: 507 SHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQM 686
+ I++ TPG+M D ++ M D+ K+ VLDEAD M+N G + I P
Sbjct: 122 AQIVVATPGRMQDM-MRRRMVDITKLSYCVLDEADEMLN-MGFYEDITNILADTPEDKLT 179
Query: 687 MFFSATYGTAVMQFAEIIVSNPL 755
FSAT V + A+ + +PL
Sbjct: 180 WLFSATMPREVARIAKEFMHDPL 202
Score = 37.1 bits (82), Expect = 0.69
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 155 TFEALHLKPNLLKGVYAMGFNAPSKIQETALP 250
TF+ L L LL+ + MGF PSKIQE A+P
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIP 33
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 47.2 bits (107), Expect = 6e-04
Identities = 26/80 (32%), Positives = 45/80 (56%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
I++ T G++ D VK + K+++ VLDEAD M++ G D +I + LP Q +
Sbjct: 158 IVVATVGRLLDH-VKQKNISLNKVEIVVLDEADRMLD-MGFIDDIRKIMQMLPKQRQTLL 215
Query: 693 FSATYGTAVMQFAEIIVSNP 752
FSAT+ + + A+ ++ P
Sbjct: 216 FSATFSAPIRKLAQDFMNAP 235
Score = 35.9 bits (79), Expect = 1.6
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRV-------DSNKNYP-QVLCLSPTYELAIQTGEVAAK 429
+++A +Q+GTGKTAAF+L L R+ S +P ++L L+PT ELA Q +
Sbjct: 68 DLLAAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQS 127
Query: 430 MAKFCP 447
K P
Sbjct: 128 YIKNLP 133
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 47.2 bits (107), Expect = 6e-04
Identities = 28/89 (31%), Positives = 45/89 (50%)
Frame = +3
Query: 489 QGFKNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCL 668
+ ++ IL+GTPG++ D K + +++ VLDEAD M++ G D RI L
Sbjct: 227 EALRSGVEILVGTPGRLLDL-AKQKHLKLDRVRALVLDEADRMLD-LGFLDDVERILAIL 284
Query: 669 PSTCQMMFFSATYGTAVMQFAEIIVSNPL 755
P Q M FSAT ++ + + P+
Sbjct: 285 PEDRQTMLFSATMPDPIVALSRRFLRRPV 313
Score = 35.5 bits (78), Expect = 2.1
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRV----DSNKNYPQVLCLSPTYELAIQTGE 417
++I Q+ +GTGKT F + +L +V + PQ L + PT EL IQ +
Sbjct: 149 DLIGQAPTGTGKTLGFGVPLLEQVLAPAEGGDGTPQALVVVPTRELGIQVAK 200
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 47.2 bits (107), Expect = 6e-04
Identities = 23/69 (33%), Positives = 43/69 (62%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMA 435
LA ++++A+S++GTGKT +F++ +L + S + + L PT ELA+Q + K++
Sbjct: 48 LAINNKDILARSKNGTGKTLSFLIPILQNIYSESYGIESIILVPTRELALQISSLLRKLS 107
Query: 436 KFCPEIKLK 462
K+ I L+
Sbjct: 108 KYMKNINLQ 116
Score = 41.9 bits (94), Expect = 0.024
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGK-IKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQM 686
+IL+GTPGK++D K ++ K K VLDEAD +++ + + ++ Q+
Sbjct: 132 NILLGTPGKIYDCLCK---NEVNKTCKTLVLDEADKLLSGEVYDTTLKILNHYKNKISQI 188
Query: 687 MFFSATYGTAVMQFAEIIVSNPL 755
M FSAT+ + ++ ++NP+
Sbjct: 189 MLFSATFPYHIQNIKKMYMNNPI 211
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 47.2 bits (107), Expect = 6e-04
Identities = 23/81 (28%), Positives = 45/81 (55%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
++I TPG++ D + + +++ +LDEAD +++ G +D+ +I + P+ Q M
Sbjct: 314 VVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLD-MGFKDEINKIVESCPTNRQTML 372
Query: 693 FSATYGTAVMQFAEIIVSNPL 755
FSAT V A++ + P+
Sbjct: 373 FSATLNDEVKTLAKLSLQQPI 393
Score = 45.6 bits (103), Expect = 0.002
Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRV---DSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 441
++++A + +G+GKTAAF+L +L R+ DS +VL L PT ELA+Q V +A+F
Sbjct: 228 KDILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQF 287
Score = 37.5 bits (83), Expect = 0.52
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 155 TFEALHLKPNLLKGVYAMGFNAPSKIQETALP 250
TFE LHL LLK V +GF+ P+ IQ A+P
Sbjct: 191 TFEELHLSRPLLKAVQKLGFSQPTPIQAKAIP 222
>UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 703
Score = 47.2 bits (107), Expect = 6e-04
Identities = 24/78 (30%), Positives = 44/78 (56%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
++I TPG++ + + + ++++ V+DEAD++ QG + Q I K LP Q +
Sbjct: 123 VIIATPGRLLQI-IAETQYSLSRVQIIVIDEADLLF-EQGLEPQMTAILKLLPEKHQSLL 180
Query: 693 FSATYGTAVMQFAEIIVS 746
FSAT + + +F I +S
Sbjct: 181 FSATVPSVLAEFTRINLS 198
Score = 46.8 bits (106), Expect = 9e-04
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +1
Query: 256 LADPPQNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCL--SPTYELAIQTGEVAAK 429
LAD +++A S++G+GKTA+F+L ++ +++ + CL +P+ ELA+QTG K
Sbjct: 35 LAD--HDVVAMSKTGSGKTASFLLPIVQKLNEHSTITGCRCLIITPSRELALQTGHYFQK 92
Query: 430 MAKFCPEIKLKYAVRGEELP 489
A +K + GE LP
Sbjct: 93 YAS-QTNLKCAQIIGGEALP 111
>UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 670
Score = 47.2 bits (107), Expect = 6e-04
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Frame = +1
Query: 280 IAQSQSGTGKTAAFVLAMLSRVDSNKNYPQ----VLCLSPTYELAIQTGEVAAKMAKFCP 447
+AQ+++GTGKT AF++ + + + + PQ +L ++PT ELA Q + A+++ K P
Sbjct: 120 LAQAKTGTGKTIAFLIPAIQTLINKQRRPQDGISLLVMTPTRELAQQIAKEASQLLKNLP 179
Query: 448 EIKLKYAVRG 477
K+ +A+ G
Sbjct: 180 NYKVGFAIGG 189
Score = 42.3 bits (95), Expect = 0.018
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Frame = +3
Query: 501 NHSHILIGTPGKMFDWGVKFGMFD-MGKIKVFVLDEADVMINRQGHQDQCIRIHKCLP-- 671
N +ILI TPG++FD G+ + + VLDEAD +++ G + I KCLP
Sbjct: 201 NGCNILIATPGRLFDHLSDEGITNAFRNLDTIVLDEADRLLD-MGFMNAIRDIIKCLPDK 259
Query: 672 --STCQMMFFSATYGTAVMQFAEIIVS 746
+ Q M FSAT V + A +++S
Sbjct: 260 QKTKRQGMLFSATIAPHVEKVAHLVLS 286
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 47.2 bits (107), Expect = 6e-04
Identities = 28/85 (32%), Positives = 43/85 (50%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
K + IL+ TPG++ D +K G + ++ VLDEAD M++ G D I P
Sbjct: 117 KRGAEILVATPGRLIDH-IKRGSISIDRVTHLVLDEADTMLD-MGFIDDIQFILDLTPDE 174
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNP 752
M FSAT +++ +E + NP
Sbjct: 175 KVMSLFSATMPIEILRLSEEYLKNP 199
Score = 44.0 bits (99), Expect = 0.006
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKF 441
++++ Q+ +GTGKT A+ ++ML + Q L ++PT ELA+Q E K AK+
Sbjct: 40 RDVVGQAHTGTGKTGAYSISMLQEIKEGGGI-QGLIVAPTRELAVQITEEVKKFAKY 95
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 47.2 bits (107), Expect = 6e-04
Identities = 23/77 (29%), Positives = 42/77 (54%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVDSNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI 453
+++ Q++SG GKTA FVLA L +++ VL + T ELA Q + + +K+ P +
Sbjct: 84 DVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNV 143
Query: 454 KLKYAVRGEELPRGSKI 504
K+ G + + ++
Sbjct: 144 KVAVFFGGLSIKKDEEV 160
Score = 45.6 bits (103), Expect = 0.002
Identities = 25/86 (29%), Positives = 42/86 (48%)
Frame = +3
Query: 498 KNHSHILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPST 677
KN HI++GTPG++ + ++ IK F+LDE D M+ + + I + P
Sbjct: 163 KNCPHIVVGTPGRILALARNKSL-NLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHE 221
Query: 678 CQMMFFSATYGTAVMQFAEIIVSNPL 755
Q+M FSAT + + +P+
Sbjct: 222 KQVMMFSATLSKEIRPVCRKFMQDPM 247
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 47.2 bits (107), Expect = 6e-04
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +1
Query: 274 NMIAQSQSGTGKTAAFVLAMLSRVD-SNKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPE 450
+++ Q++SG GKTA FVLA L +++ S+ N VL + T ELA Q + + +K+ P
Sbjct: 80 DILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPT 139
Query: 451 IKL 459
+K+
Sbjct: 140 VKV 142
Score = 42.7 bits (96), Expect = 0.014
Identities = 23/82 (28%), Positives = 42/82 (51%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
HI++GTPG++ ++ ++ +K FVLDE D M+ + + I + P Q+M
Sbjct: 164 HIVVGTPGRILAL-IRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVM 222
Query: 690 FFSATYGTAVMQFAEIIVSNPL 755
FSAT + + + +P+
Sbjct: 223 MFSATLSKDIRPVCKKFMQDPM 244
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 47.2 bits (107), Expect = 6e-04
Identities = 28/88 (31%), Positives = 48/88 (54%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
+L+ TPG++ D + + + ++++ VLDEAD M++ G R+ LP+ Q +
Sbjct: 128 VLVATPGRLLDLEHQNAV-KLDQVEILVLDEADRMLD-MGFIHDIRRVLTKLPAKRQNLL 185
Query: 693 FSATYGTAVMQFAEIIVSNPL*SAFERR 776
FSAT+ + AE ++ NPL RR
Sbjct: 186 FSATFSDDIKALAEKLLHNPLEIEVARR 213
Score = 39.9 bits (89), Expect = 0.098
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSNKNYP------QVLCLSPTYELAIQTGEVAAKM 432
++++A +Q+GTGKTA F L +L + + + + + L L+PT ELA Q GE
Sbjct: 39 RDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDY 98
Query: 433 AKF 441
+K+
Sbjct: 99 SKY 101
>UniRef50_Q9FLB0 Cluster: DEAD-box ATP-dependent RNA helicase 18;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 18 - Arabidopsis thaliana (Mouse-ear cress)
Length = 593
Score = 47.2 bits (107), Expect = 6e-04
Identities = 27/82 (32%), Positives = 44/82 (53%)
Frame = +3
Query: 510 HILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMM 689
++LIGTPG++ D + + D +++ +LDEAD ++ G Q Q I LP +
Sbjct: 144 NVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLL-EMGFQRQVNYIISRLPKQRRTG 202
Query: 690 FFSATYGTAVMQFAEIIVSNPL 755
FSAT V + A+ + NP+
Sbjct: 203 LFSATQTEGVEELAKAGLRNPV 224
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 47.2 bits (107), Expect = 6e-04
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
ILI TPG++ D F + I+V +LDEAD M++ + ++Q I + Q M
Sbjct: 342 ILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLD-EYFEEQMKEIIRMCSHHRQTML 400
Query: 693 FSATYGTAVMQFAEIIVSNPL 755
FSAT V A + + NP+
Sbjct: 401 FSATMTDEVKDLASVSLKNPV 421
Score = 44.8 bits (101), Expect = 0.003
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSR-VDSNKNYP--QVLCLSPTYELAIQTGEVAAKMAKF 441
+++ A + +GTGKTAAF L +L R + + P +VL L PT EL IQ V ++A+F
Sbjct: 256 KDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQF 315
Query: 442 C 444
C
Sbjct: 316 C 316
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 47.2 bits (107), Expect = 6e-04
Identities = 29/80 (36%), Positives = 42/80 (52%)
Frame = +3
Query: 513 ILIGTPGKMFDWGVKFGMFDMGKIKVFVLDEADVMINRQGHQDQCIRIHKCLPSTCQMMF 692
I+I TPG+ V+ + D+ IK V DEAD + G Q I LPST Q +
Sbjct: 214 IVIATPGRFLHLKVEMNL-DLSSIKYVVFDEADRLFE-MGFAAQLTEILHGLPSTRQTLL 271
Query: 693 FSATYGTAVMQFAEIIVSNP 752
FSAT ++++FA + +P
Sbjct: 272 FSATLPKSLVEFARAGLQDP 291
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/74 (36%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Frame = +1
Query: 271 QNMIAQSQSGTGKTAAFVLAMLSRVDSN--KNYPQVLCLSPTYELAIQTGEVAAKMAKFC 444
Q+++ +++G+GKTAAFV+ M+ ++ S+ K + L LSP+ ELA+QT +V ++ K
Sbjct: 129 QDVVGMARTGSGKTAAFVIPMIEKLKSHSTKFGARGLILSPSRELALQTLKVVKELGK-G 187
Query: 445 PEIKLKYAVRGEEL 486
++K V G+ L
Sbjct: 188 TDLKSVLLVGGDSL 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 991,598,604
Number of Sequences: 1657284
Number of extensions: 20047812
Number of successful extensions: 46080
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 43156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45555
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 92264799902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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