Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0795
         (972 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    28   0.095
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   0.89 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    25   0.89 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.7  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   4.7  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    22   8.3  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 28.3 bits (60), Expect = 0.095
 Identities = 22/71 (30%), Positives = 33/71 (46%)
 Frame = -1

Query: 540 AFNNIPKDNMSPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*MDF 361
           ++ N  +  MSP    VL + M  +EP    P++     PGP      F  +N LP    
Sbjct: 128 SYYNESRVMMSPPGN-VLNLTMPKYEP---NPSII---DPGPALPPAGFLCNNYLPLPQV 180

Query: 360 PPVPLWLVKSP 328
           PP+PL  + +P
Sbjct: 181 PPLPLPPIFAP 191


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.89
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = +3

Query: 360 ESPSTAISLKTR---ISPLSTLDLASSPWLMPV 449
           ESP  A  L  R   I  +ST+DL SS W +P+
Sbjct: 373 ESPPAADELLRRFHEIRYMSTIDLRSSYWQIPL 405


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 25.0 bits (52), Expect = 0.89
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = -1

Query: 540 AFNNIPKDNMSPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*MDF 361
           ++ N  +  MSP    VL + M  +EP    P++     PGP      F  +N  P    
Sbjct: 128 SYYNESRVMMSPPGN-VLNLTMPKYEP---NPSII---DPGPALPPTGFLCNNYPPLPQV 180

Query: 360 PPVPL 346
           PP+PL
Sbjct: 181 PPLPL 185


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +3

Query: 798 LFPCIISMFMVHFAI-TFYFH 857
           LF C   +F VHF + T+YF+
Sbjct: 84  LFYCPFIIFTVHFLLCTYYFY 104


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -2

Query: 296 GKWSPCNRSLSRQCQGTEVFTRLGSDVTSQLNNNFSQWGIVNSDVE-EY 153
           G W+  N  L+    G    ++L + + S   + FSQWG    D++ EY
Sbjct: 103 GGWNAGNAILN----GIVASSKLRASLISSCLSFFSQWGYDGIDIDWEY 147


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +2

Query: 314 FMLQGGDFTNHNGTGGKSIYGNKF-EDENFTL 406
           F + GGDF    G+G   +YG  +   EN  L
Sbjct: 78  FWIHGGDFV--TGSGTSEMYGPDYLMSENVVL 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,021
Number of Sequences: 336
Number of extensions: 5884
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27513178
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)