Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0795
(972 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 146 5e-36
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 145 9e-36
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 124 2e-29
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 109 8e-25
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 100 6e-22
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 89 7e-19
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 77 4e-15
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 62 1e-10
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 29 0.99
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 28 2.3
SPBC646.07c |||enoyl reductase|Schizosaccharomyces pombe|chr 2||... 27 3.0
SPCC1235.04c |||FAD synthetase|Schizosaccharomyces pombe|chr 3||... 27 3.0
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 5.3
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 27 5.3
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 26 7.0
SPBC36.05c |clr6||histone deacetylase |Schizosaccharomyces pombe... 26 7.0
SPAC23D3.08 |usp108||U1 snRNP-associated protein Usp108|Schizosa... 26 9.2
SPBC3B8.07c |dsd1|SDCB3B8.07c|dihydroceramide delta-4 desaturase... 26 9.2
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 26 9.2
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 146 bits (353), Expect = 5e-36
Identities = 64/81 (79%), Positives = 71/81 (87%)
Frame = +2
Query: 257 TGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSM 436
TGEKGFGY+GSIFHRVIPNFM+QGGD T +GTGGKSIYG++F DENF L H PG+LSM
Sbjct: 64 TGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSM 123
Query: 437 ANAGADTNGSQFFITTVKTSW 499
ANAG D+NGSQFFITTVKT W
Sbjct: 124 ANAGPDSNGSQFFITTVKTPW 144
Score = 41.5 bits (93), Expect = 2e-04
Identities = 21/48 (43%), Positives = 25/48 (52%)
Frame = +3
Query: 126 NTGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALALARK 269
N G V+FD+ D LG++ I L PKT ENFRALA K
Sbjct: 20 NRGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEK 67
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 511 HVVFGNVVEGMEVVKQI 561
HVVFG V+ G ++VK+I
Sbjct: 149 HVVFGEVLSGYDIVKKI 165
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 145 bits (351), Expect = 9e-36
Identities = 65/81 (80%), Positives = 68/81 (83%)
Frame = +2
Query: 257 TGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSM 436
TGEKG+GY GS FHRVIP FMLQGGDFT NGTGGKSIYG KF DENF LKH PG+LSM
Sbjct: 39 TGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSM 98
Query: 437 ANAGADTNGSQFFITTVKTSW 499
ANAG +TNGSQFFITTV T W
Sbjct: 99 ANAGPNTNGSQFFITTVVTPW 119
Score = 56.0 bits (129), Expect = 8e-09
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1
Query: 508 RHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 627
+HVVFG V EGM+VVK++E+ GS SG T RIVI CG +
Sbjct: 123 KHVVFGEVTEGMDVVKKVESLGSNSGATRARIVIDKCGTV 162
Score = 46.0 bits (104), Expect = 8e-06
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +3
Query: 156 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALALARK 269
FFDV + PLG+IV +L DV PKT NFRAL K
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEK 42
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 124 bits (299), Expect = 2e-29
Identities = 58/72 (80%), Positives = 61/72 (84%)
Frame = +2
Query: 278 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 457
YKGS FHRVI NFMLQGGDFT NGTGG+SIYG KFEDENF LKH P +LSMANAG +T
Sbjct: 51 YKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNT 110
Query: 458 NGSQFFITTVKT 493
NGSQFFITTV T
Sbjct: 111 NGSQFFITTVPT 122
Score = 35.9 bits (79), Expect = 0.009
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 508 RHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCG 621
+HVVFG V++G V+ IE +++ +VI++CG
Sbjct: 128 KHVVFGKVIQGKSTVRTIENLETKNDDPVVPVVIEECG 165
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 156 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRAL 254
+F +++D I EL +V PKT +NF +L
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASL 38
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 109 bits (261), Expect = 8e-25
Identities = 49/79 (62%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Frame = +2
Query: 254 GTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNK-FEDENFTLKHTGPGVL 430
G +K GYK S FHR+I FM+QGGDF + +GTG +I+ ++ F DENFTLKH PG+L
Sbjct: 47 GVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLL 106
Query: 431 SMANAGADTNGSQFFITTV 487
SMANAG D+NG QFFITTV
Sbjct: 107 SMANAGKDSNGCQFFITTV 125
Score = 44.8 bits (101), Expect = 2e-05
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +3
Query: 147 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALALARKASVTRAPFSIVSS 308
P VF D+ +D LG+I I L S + PKT ENFR V + P +S
Sbjct: 5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNS 58
Score = 39.5 bits (88), Expect = 7e-04
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +1
Query: 490 DLLAGWRHVVFGNVVEGMEVVKQIE-TFGSQSGKTSKRIVIKDCGQI 627
D L G +HVVFG V+EG ++VK+IE T + + + I +CG++
Sbjct: 128 DFLDG-KHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAIVECGEM 173
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 99.5 bits (237), Expect = 6e-22
Identities = 48/75 (64%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Frame = +2
Query: 278 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGAD 454
Y G IFHRVIP+F++QGGD T G GG SIYG+KF+DE + L HTG G+LSMANAG +
Sbjct: 38 YDGVIFHRVIPDFVIQGGDPTG-TGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPN 96
Query: 455 TNGSQFFITTVKTSW 499
TN SQFFIT T W
Sbjct: 97 TNSSQFFITLAPTPW 111
Score = 35.1 bits (77), Expect = 0.015
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 186 LGKIVIELRSDVTPKTCENFRALA 257
LGKI+IEL ++ PKTC+NF LA
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLA 33
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 89.4 bits (212), Expect = 7e-19
Identities = 46/80 (57%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Frame = +2
Query: 263 EKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMA 439
E G+ Y +IFHR+I NFM+QGGD +GTGG+SI+ FEDE + LKH P +SMA
Sbjct: 487 ENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGESIWKKDFEDEISPNLKHDRPFTVSMA 544
Query: 440 NAGADTNGSQFFITTVKTSW 499
N+G +TNGSQFFITT T W
Sbjct: 545 NSGPNTNGSQFFITTDLTPW 564
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 77.0 bits (181), Expect = 4e-15
Identities = 38/68 (55%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +2
Query: 278 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGAD 454
Y+ +IFHR I FM+QGGD + G GG+SI+G F+DE LKH G++SMAN G +
Sbjct: 312 YRNTIFHRNIARFMIQGGD-PSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKN 370
Query: 455 TNGSQFFI 478
TNGSQFFI
Sbjct: 371 TNGSQFFI 378
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 62.1 bits (144), Expect = 1e-10
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +2
Query: 278 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENF-TLKHTGPGVLSMANAGAD 454
Y G+I HRV+P F++QGGD T G GG+SIYG F E L+ G++ MA +
Sbjct: 49 YDGTIVHRVVPEFLIQGGDPTG-TGMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENE 107
Query: 455 TNGSQFFIT 481
N SQFFIT
Sbjct: 108 GNNSQFFIT 116
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 29.1 bits (62), Expect = 0.99
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 177 DAPLGKIVIELRSDVTPKTCENFRALALARKASVTRAPFSIVSSPISC 320
+ +G +VI+L PKTCENF L L + PF + +C
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENF--LKLCKLKYYNFCPFYNIQHNYTC 51
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 27.9 bits (59), Expect = 2.3
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 279 TRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLSTLDLASS 431
+RA S++S I KE +P+ITA SP +A S + ISP + + +S
Sbjct: 321 SRAAASLLS--ILDSKEKNTPSITAKAGSPQSAPSKASYISPYARPGITTS 369
>SPBC646.07c |||enoyl reductase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 295
Score = 27.5 bits (58), Expect = 3.0
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +1
Query: 802 FHALLVCSWCILLLHFISTSSLAVWFRPNNSHY 900
F ALL SW + F+ ++ + VW + ++ Y
Sbjct: 244 FFALLTKSWASWIFLFVGSAQMFVWAKKKHARY 276
>SPCC1235.04c |||FAD synthetase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 265
Score = 27.5 bits (58), Expect = 3.0
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = -1
Query: 789 PSSLHQ*QYLLNNWNDPYFI*I--ILYWEGIFIYQEDLVFNLKYCSLF*S**FKLGNLTT 616
P LH+ + + + P F+ I IL W I+ L N KYCSL+ LG ++
Sbjct: 148 PHGLHRIAFEVTDKGWPKFMRIQPILDWSYTEIWDLLLETNTKYCSLYDRGYTSLGGVSD 207
Query: 615 VFDNDSLR 592
N +L+
Sbjct: 208 TSPNPALK 215
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 5.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 460 WFPVLHHHC 486
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 528 IPKDNMSPSSQEVLTVVMKNWEPLVSAPAL-AMERTPGPV 412
+P+D S + +L + + W PL +A L A+ P P+
Sbjct: 316 LPRDIKSKDPRNLLLAIFQQWLPLSTAILLTAIREIPSPI 355
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 587 FPDWLPKVSICLTTSMPSTTFPKT 516
FP WL K S CL +P T+ P T
Sbjct: 302 FP-WLKKNSFCLYLPIPLTSIPST 324
>SPBC36.05c |clr6||histone deacetylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 405
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -1
Query: 534 NNIPKDNMSPSSQEVLTVVMKNWEPLVSAPALAMERTPG 418
NN+ N + + +++N L AP++ M +TPG
Sbjct: 345 NNMENHNTRQYLDSITSEIIENLRNLSFAPSVQMHKTPG 383
>SPAC23D3.08 |usp108||U1 snRNP-associated protein
Usp108|Schizosaccharomyces pombe|chr 1|||Manual
Length = 382
Score = 25.8 bits (54), Expect = 9.2
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 355 SAVMVGEVPSLQHEIGDDTMENGALVTEAFLASARARK-FSHVLGVTSLLSSI 200
+A V E L +I + ++NG + E + +S ARK F V++L SSI
Sbjct: 40 TAQQVQEWNLLPQDIQQEILKNGQVRVETYSSSNTARKIFICTSSVSNLASSI 92
>SPBC3B8.07c |dsd1|SDCB3B8.07c|dihydroceramide delta-4
desaturase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 362
Score = 25.8 bits (54), Expect = 9.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 823 SWCILLLHFISTSSLAVWFR 882
SWC ++ FI+ S++ +W R
Sbjct: 323 SWCGIIYQFITDSNVGMWCR 342
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 9.2
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 332 DFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADTNGSQFFI 478
D + T KS+YG +D+N F + T V+ ADT Q F+
Sbjct: 11 DLEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,176,285
Number of Sequences: 5004
Number of extensions: 92591
Number of successful extensions: 302
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 499296500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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