Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0795
(972 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 149 4e-36
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 144 8e-35
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 141 6e-34
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 141 7e-34
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 141 7e-34
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 140 1e-33
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 138 4e-33
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 137 9e-33
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 133 1e-31
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 132 4e-31
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 115 4e-26
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 115 5e-26
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 111 7e-25
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 111 7e-25
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 101 1e-21
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 95 6e-20
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 90 2e-18
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 85 7e-17
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 85 9e-17
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 80 2e-15
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 77 2e-14
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 58 9e-09
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 50 2e-06
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 33 0.22
At3g09000.1 68416.m01053 proline-rich family protein 28 8.1
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 28 8.1
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 149 bits (360), Expect = 4e-36
Identities = 66/81 (81%), Positives = 72/81 (88%)
Frame = +2
Query: 257 TGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSM 436
TGEK +GYKGS FHR+I +FM+QGGDFT NGTGG SIYG KFEDENFTLKHTGPG+LSM
Sbjct: 132 TGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSM 191
Query: 437 ANAGADTNGSQFFITTVKTSW 499
ANAG +TNGSQFFI TVKTSW
Sbjct: 192 ANAGPNTNGSQFFICTVKTSW 212
Score = 41.5 bits (93), Expect = 8e-04
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +3
Query: 150 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALALARK 269
+V+FDV + G+IV+ L +V PKT ENFRAL K
Sbjct: 96 KVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEK 135
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/41 (36%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +1
Query: 508 RHVVFGNVVEGMEVVKQIETFGSQSGKTSKR-IVIKDCGQI 627
+HVVFG V+EGM++V+ +E+ +++ K+ I CG++
Sbjct: 216 KHVVFGQVIEGMKLVRTLESQETRAFDVPKKGCRIYACGEL 256
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 144 bits (349), Expect = 8e-35
Identities = 63/81 (77%), Positives = 69/81 (85%)
Frame = +2
Query: 257 TGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSM 436
TGEKGFGYKGS FHRVI +FM+QGGDF NGTGGKS+YG F+DENF L H GPGVLSM
Sbjct: 130 TGEKGFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSM 189
Query: 437 ANAGADTNGSQFFITTVKTSW 499
ANAG +TNGSQFFI T+KTSW
Sbjct: 190 ANAGPNTNGSQFFICTIKTSW 210
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/41 (58%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = +1
Query: 508 RHVVFGNVVEGMEVVKQIETFGSQSG-KTSKRIVIKDCGQI 627
RHVVFG V+EGMEVVK IE + G + K++VI DCGQ+
Sbjct: 214 RHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQL 254
Score = 36.7 bits (81), Expect = 0.023
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Frame = +3
Query: 150 RVFFDVTVDDAPLGK----IVIELRSDVTPKTCENFRALALARK 269
+V+FD++V + P+GK IVI L D P+T ENFRAL K
Sbjct: 91 KVYFDISVGN-PVGKLAGRIVIGLYGDDVPQTVENFRALCTGEK 133
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 141 bits (342), Expect = 6e-34
Identities = 67/88 (76%), Positives = 71/88 (80%), Gaps = 7/88 (7%)
Frame = +2
Query: 257 TGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHT 415
TGEKG G YKGS FHR+IP+FMLQGGDFT+ NG GG+SIYG KF DENF LKHT
Sbjct: 72 TGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHT 131
Query: 416 GPGVLSMANAGADTNGSQFFITTVKTSW 499
GPG LSMANAG DTNGSQFFITTV TSW
Sbjct: 132 GPGFLSMANAGQDTNGSQFFITTVTTSW 159
Score = 48.8 bits (111), Expect = 5e-06
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1
Query: 508 RHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 627
RHVVFG VV GM+VV ++E G+QSG ++VI D G++
Sbjct: 163 RHVVFGKVVTGMDVVYKVEAEGNQSGTPKSKVVIVDSGEL 202
Score = 41.9 bits (94), Expect = 6e-04
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +3
Query: 150 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALALARK 269
+V+FDV +D G+IV+ L PKT ENFRAL K
Sbjct: 36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEK 75
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 141 bits (341), Expect = 7e-34
Identities = 67/88 (76%), Positives = 72/88 (81%), Gaps = 7/88 (7%)
Frame = +2
Query: 257 TGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHT 415
TGEKG G +KGS FHRVIPNFM QGGDFT NGTGG+SIYG+KFEDENF KHT
Sbjct: 41 TGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHT 100
Query: 416 GPGVLSMANAGADTNGSQFFITTVKTSW 499
GPG+LSMANAGA+TNGSQFFI TVKT W
Sbjct: 101 GPGILSMANAGANTNGSQFFICTVKTDW 128
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/47 (59%), Positives = 36/47 (76%)
Frame = +1
Query: 490 DLLAGWRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 630
D L G +HVVFG VVEG++VVK IE GS SGK +K +V+ DCGQ++
Sbjct: 127 DWLDG-KHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQLS 172
Score = 58.4 bits (135), Expect = 7e-09
Identities = 24/44 (54%), Positives = 33/44 (75%)
Frame = +3
Query: 138 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALALARK 269
M+ P+V+FD+T+D P G+IV+EL +D TP+T ENFRAL K
Sbjct: 1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEK 44
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 141 bits (341), Expect = 7e-34
Identities = 67/88 (76%), Positives = 71/88 (80%), Gaps = 7/88 (7%)
Frame = +2
Query: 257 TGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHT 415
TGEKG G +KGS FHRVIPNFM QGGDFT NGTGG+SIYG KFEDENF KHT
Sbjct: 42 TGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHT 101
Query: 416 GPGVLSMANAGADTNGSQFFITTVKTSW 499
GPG+LSMANAGA+TNGSQFFI TVKT W
Sbjct: 102 GPGILSMANAGANTNGSQFFICTVKTDW 129
Score = 60.5 bits (140), Expect = 2e-09
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +1
Query: 490 DLLAGWRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 630
D L G +HVVFG VVEG++VVK IE GS SGK +K +VI DCG+I+
Sbjct: 128 DWLDG-KHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173
Score = 59.3 bits (137), Expect = 4e-09
Identities = 27/43 (62%), Positives = 32/43 (74%)
Frame = +3
Query: 141 SLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALALARK 269
S P+VFFD+T+ AP GKIV+EL +D TPKT ENFRAL K
Sbjct: 3 SHPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEK 45
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 140 bits (340), Expect = 1e-33
Identities = 66/88 (75%), Positives = 72/88 (81%), Gaps = 7/88 (7%)
Frame = +2
Query: 257 TGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHT 415
TGEKG G YKGS FHR+IP+FM+QGGDFT+ NG GG+SIYG KF DENF LKHT
Sbjct: 69 TGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHT 128
Query: 416 GPGVLSMANAGADTNGSQFFITTVKTSW 499
GPGVLSMAN+G DTNGSQFFITTV TSW
Sbjct: 129 GPGVLSMANSGEDTNGSQFFITTVTTSW 156
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +1
Query: 508 RHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 627
RHVVFG VV+GM+VV +IE G QSG ++VI D G++
Sbjct: 160 RHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGEL 199
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +3
Query: 150 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALALARK 269
+V+FDV +D G++VI L PKT ENFRAL K
Sbjct: 33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEK 72
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 138 bits (335), Expect = 4e-33
Identities = 61/82 (74%), Positives = 67/82 (81%)
Frame = +2
Query: 254 GTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLS 433
G K YKGS FHR+IP FM QGGDFT NGTGG+SIYG+KFEDENF LKHTGPG+LS
Sbjct: 47 GKAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILS 106
Query: 434 MANAGADTNGSQFFITTVKTSW 499
MAN+G +TNGSQFFI T KTSW
Sbjct: 107 MANSGPNTNGSQFFICTEKTSW 128
Score = 53.2 bits (122), Expect = 3e-07
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = +1
Query: 508 RHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQI 627
+HVVFG VV+G VVK +E GS G S+R+VI+DCG++
Sbjct: 132 KHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171
Score = 48.8 bits (111), Expect = 5e-06
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +3
Query: 138 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRAL 254
M+ P+VFFD+ + G++V+EL +DVTP+T NFRAL
Sbjct: 1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRAL 39
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 137 bits (332), Expect = 9e-33
Identities = 65/88 (73%), Positives = 71/88 (80%), Gaps = 7/88 (7%)
Frame = +2
Query: 257 TGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHT 415
TGE+G G YKGS FHRVIP FM QGGDFT NGTGG+SIYG+KF+DENF KHT
Sbjct: 42 TGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHT 101
Query: 416 GPGVLSMANAGADTNGSQFFITTVKTSW 499
GPG+LSMANAGA+TNGSQFFI T KTSW
Sbjct: 102 GPGILSMANAGANTNGSQFFICTEKTSW 129
Score = 61.7 bits (143), Expect = 7e-10
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +1
Query: 508 RHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 630
+HVVFG VVEG+ VV+ IE GS SG+TSK +VI DCGQI+
Sbjct: 133 KHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +3
Query: 147 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALALARK 269
P+V+FD+TV G+IV+EL +D TP+T ENFRAL +
Sbjct: 5 PKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGER 45
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 133 bits (322), Expect = 1e-31
Identities = 62/88 (70%), Positives = 70/88 (79%), Gaps = 7/88 (7%)
Frame = +2
Query: 257 TGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHT 415
TGEKG G +KGS FHR+IP FM+QGGDFT +G GG+SIYG+KF DENF LKHT
Sbjct: 96 TGEKGVGNMGKPLYFKGSSFHRIIPGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHT 155
Query: 416 GPGVLSMANAGADTNGSQFFITTVKTSW 499
GPG LSMAN+G D+NGSQFFITTV TSW
Sbjct: 156 GPGFLSMANSGPDSNGSQFFITTVTTSW 183
Score = 44.8 bits (101), Expect = 9e-05
Identities = 17/40 (42%), Positives = 28/40 (70%)
Frame = +3
Query: 150 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALALARK 269
+V+FD+ ++ +P G+I+I L ++ PKT ENFR+L K
Sbjct: 60 KVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEK 99
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +1
Query: 511 HVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 630
HVVFG V+ GMEVV++IE G SG ++I G+++
Sbjct: 188 HVVFGKVLSGMEVVRKIEAQGQDSGVPKANVIIFASGEVS 227
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 132 bits (318), Expect = 4e-31
Identities = 63/88 (71%), Positives = 69/88 (78%), Gaps = 7/88 (7%)
Frame = +2
Query: 257 TGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHT 415
TGEKG G +KGSIFHRVIP FM QGGDFT NGTGG+SIYG KF+DENF KHT
Sbjct: 41 TGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHT 100
Query: 416 GPGVLSMANAGADTNGSQFFITTVKTSW 499
G G+LSMAN+G +TNGSQFFI T KTSW
Sbjct: 101 GAGILSMANSGPNTNGSQFFICTDKTSW 128
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/41 (63%), Positives = 33/41 (80%)
Frame = +1
Query: 508 RHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQIA 630
+HVVFG VV+G++VVK IE GS SGKTSK + I DCGQ++
Sbjct: 132 KHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +3
Query: 138 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALALARK 269
MS PRVFFD+++ P+G+I +EL +D TP T ENFRAL K
Sbjct: 1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEK 44
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 115 bits (277), Expect = 4e-26
Identities = 56/88 (63%), Positives = 67/88 (76%), Gaps = 8/88 (9%)
Frame = +2
Query: 257 TGEKGFG--------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKH 412
TGEKG G YKG+ FHRVI FM+QGGD + ++GTGG+SIYG KF+DENF LKH
Sbjct: 41 TGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKH 100
Query: 413 TGPGVLSMANAGADTNGSQFFITTVKTS 496
G+LSMAN+G +TNGSQFFITT +TS
Sbjct: 101 ERKGMLSMANSGPNTNGSQFFITTTRTS 128
Score = 42.7 bits (96), Expect = 4e-04
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = +3
Query: 138 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALALARK 269
M + F D+++ G+IVIEL DV PKT ENFR L K
Sbjct: 1 MGRSKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEK 44
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 508 RHVVFGNVVEGMEVVKQIETFG-SQSGKTSKRIVIKDCGQI 627
+HVVFG V +GM VV+ IE + S+ +VI DCG+I
Sbjct: 133 KHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQDVVIHDCGEI 173
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 115 bits (276), Expect = 5e-26
Identities = 51/78 (65%), Positives = 60/78 (76%)
Frame = +2
Query: 266 KGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANA 445
K GYK FHRVI +FM+Q GDF ++G+G SIYG+KFEDENFT KHTGPG+LSMAN+
Sbjct: 77 KPLGYKECQFHRVIKDFMVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANS 136
Query: 446 GADTNGSQFFITTVKTSW 499
G +TNG QFFIT K W
Sbjct: 137 GPNTNGCQFFITCAKCDW 154
Score = 45.6 bits (103), Expect = 5e-05
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +3
Query: 147 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFR 248
P VFFDV++ P G+I +EL +D+ PKT ENFR
Sbjct: 32 PVVFFDVSIGGIPAGRIKMELFADIAPKTAENFR 65
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 111 bits (267), Expect = 7e-25
Identities = 51/71 (71%), Positives = 55/71 (77%)
Frame = +2
Query: 266 KGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANA 445
K +KGS FHRVI FM QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN
Sbjct: 55 KPLHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANC 114
Query: 446 GADTNGSQFFI 478
G +TNGSQFFI
Sbjct: 115 GPNTNGSQFFI 125
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = +3
Query: 135 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRAL 254
K P VF DV++ P+ +IVIEL +DV PKT ENFRAL
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRAL 42
Score = 48.8 bits (111), Expect = 5e-06
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +1
Query: 508 RHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQ 624
+HVVFG VVEGM V+K++E G+ GK + + I DCG+
Sbjct: 136 KHVVFGKVVEGMAVIKKMELVGTSDGKPTSPVKIIDCGE 174
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 111 bits (267), Expect = 7e-25
Identities = 51/71 (71%), Positives = 55/71 (77%)
Frame = +2
Query: 266 KGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANA 445
K +KGS FHRVI FM QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN
Sbjct: 55 KPLHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANC 114
Query: 446 GADTNGSQFFI 478
G +TNGSQFFI
Sbjct: 115 GPNTNGSQFFI 125
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = +3
Query: 135 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRAL 254
K P VF DV++ P+ +IVIEL +DV PKT ENFRAL
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRAL 42
Score = 48.8 bits (111), Expect = 5e-06
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +1
Query: 508 RHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQ 624
+HVVFG VVEGM V+K++E G+ GK + + I DCG+
Sbjct: 136 KHVVFGKVVEGMAVIKKMELVGTSDGKPTSPVKIIDCGE 174
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 101 bits (241), Expect = 1e-21
Identities = 47/88 (53%), Positives = 60/88 (68%), Gaps = 7/88 (7%)
Frame = +2
Query: 257 TGEKG-------FGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHT 415
TGEKG YKG+ FHR+I F++QGGD + +G SIYG F DENF ++H+
Sbjct: 84 TGEKGKTSSGKPLHYKGTPFHRIISGFVIQGGDIIHGDGKSSDSIYGGTFPDENFKIQHS 143
Query: 416 GPGVLSMANAGADTNGSQFFITTVKTSW 499
G+++MAN G D+NGSQFFITTVK SW
Sbjct: 144 HAGMVAMANTGPDSNGSQFFITTVKASW 171
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = +3
Query: 150 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALALARKASVT 281
RVF DV +D LG+IVI L V PKT ENFRAL K +
Sbjct: 48 RVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTS 91
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +1
Query: 511 HVVFGNVVEGMEVVKQIET-FGSQSGKTSKRIVIKDCGQI 627
HVV G V++GM+ V IE G+ SGK K++VI D G+I
Sbjct: 176 HVVLGKVIQGMDNVFAIEGGAGTYSGKPRKKVVIADSGEI 215
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 95.1 bits (226), Expect = 6e-20
Identities = 45/69 (65%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = +2
Query: 278 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGAD 454
Y +FHR++ +F++QGGD T G GG+SIYG+KFEDE N LKHTG G+LSMANAG +
Sbjct: 46 YDNVLFHRIVKDFIVQGGDPTG-TGRGGESIYGSKFEDEINKELKHTGAGILSMANAGPN 104
Query: 455 TNGSQFFIT 481
TNGSQFFIT
Sbjct: 105 TNGSQFFIT 113
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 90.2 bits (214), Expect = 2e-18
Identities = 45/75 (60%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Frame = +2
Query: 278 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGAD 454
Y +FHRVI FM+Q GD +GTGG+SI+G +FEDE + +L+H P LSMANAG +
Sbjct: 512 YDNHLFHRVIRGFMIQTGDPLG-DGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPN 570
Query: 455 TNGSQFFITTVKTSW 499
TNGSQFFITTV T W
Sbjct: 571 TNGSQFFITTVATPW 585
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 508 RHVVFGNVVEGMEVVKQIE 564
+H VFG VV+GM+VV+ IE
Sbjct: 589 KHTVFGRVVKGMDVVQGIE 607
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 85.0 bits (201), Expect = 7e-17
Identities = 43/72 (59%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Frame = +2
Query: 278 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGAD 454
Y G+IFHR I FM+QGGD G GG SI+G KF DE +LKH G+LSMAN+G +
Sbjct: 37 YDGTIFHRNIKGFMIQGGD-PKGTGKGGTSIWGKKFNDEIRDSLKHNARGMLSMANSGPN 95
Query: 455 TNGSQFFITTVK 490
TNGSQFFIT K
Sbjct: 96 TNGSQFFITYAK 107
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 84.6 bits (200), Expect = 9e-17
Identities = 43/73 (58%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = +2
Query: 263 EKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMA 439
E+G+ Y G FHR I NFM+QGGD T G GG+SI+G F+DE N L H+G GV+SMA
Sbjct: 376 ERGY-YNGVAFHRSIRNFMIQGGDPTG-TGKGGESIWGKPFKDEPNSKLLHSGRGVVSMA 433
Query: 440 NAGADTNGSQFFI 478
N+G TNGSQFF+
Sbjct: 434 NSGPHTNGSQFFV 446
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 189 GKIVIELRSDVTPKTCENFRAL 254
G + IEL D+ P+ CENF L
Sbjct: 353 GDLNIELHCDIAPRACENFITL 374
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 80.2 bits (189), Expect = 2e-15
Identities = 42/83 (50%), Positives = 49/83 (59%), Gaps = 8/83 (9%)
Frame = +2
Query: 257 TGEKGFG--------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKH 412
TGEKG G YKGS FHR++ Q GDF N NGT G+SIY KF DE+ L+H
Sbjct: 44 TGEKGIGPRSGKPLHYKGSFFHRIMKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKLRH 103
Query: 413 TGPGVLSMANAGADTNGSQFFIT 481
G+LSM+ A D GS F IT
Sbjct: 104 EETGLLSMSIADRDKFGSHFHIT 126
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = +3
Query: 135 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALALARK 269
K P+VF DV++D P +V EL +V PKT ENFRAL K
Sbjct: 3 KKKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEK 47
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +1
Query: 511 HVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCGQ 624
+VVFG +++G E++K+IE G + GK + + I CG+
Sbjct: 137 NVVFGKLIQGKEILKKIERVGDEEGKPTVSVKIIRCGE 174
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 77.0 bits (181), Expect = 2e-14
Identities = 39/76 (51%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Frame = +2
Query: 278 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGA- 451
+ +IFHRVIP F++QGGD T +GTGG SIYG F DE + L+ + G+++MANA +
Sbjct: 49 FDNTIFHRVIPGFLVQGGDPTG-SGTGGDSIYGGVFADEFHSRLRFSHRGIVAMANASSP 107
Query: 452 DTNGSQFFITTVKTSW 499
++NGSQFF T K W
Sbjct: 108 NSNGSQFFFTLDKCDW 123
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 58.0 bits (134), Expect = 9e-09
Identities = 25/44 (56%), Positives = 33/44 (75%)
Frame = +3
Query: 138 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALALARK 269
M+ P+VFFD+TVD P G+IVIEL +D+TP+T ENFR L +
Sbjct: 1 MANPKVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGER 44
Score = 55.6 bits (128), Expect = 5e-08
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Frame = +2
Query: 257 TGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKH- 412
TGE+G G YKGS F ++P+ M GGD N + I+ + +DE F L H
Sbjct: 41 TGERGIGKCGKPIHYKGSTFDHIVPDLMWCGGDIIFEN----EPIHSEELDDEYFILNHE 96
Query: 413 TGPGVLSMANAGADTNGSQFFI 478
GPG++SM AD+NGSQF I
Sbjct: 97 DGPGIISM----ADSNGSQFQI 114
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = +1
Query: 511 HVVFGNVVEGMEVVKQI--ETFGSQSGKTSKRIVIKDCGQIA*FKS 642
HVV G VVEG+++++ I E + + SK +VI DCG+++ ++S
Sbjct: 127 HVVIGKVVEGLDLMRNIEKEVITTTTRTPSKPVVIADCGELSDYRS 172
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 50.4 bits (115), Expect = 2e-06
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Frame = +2
Query: 278 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIY----GNK---FEDE-NFTLKHTGPGVLS 433
Y G +FH V +F Q GD T G GG SIY G + ++DE + LKH+ G ++
Sbjct: 37 YNGCLFHTVQKDFTAQTGDPTG-TGAGGDSIYKFLYGEQARFYKDEIHLDLKHSKTGTVA 95
Query: 434 MANAGADTNGSQFFIT 481
MA+ G + N SQF+ T
Sbjct: 96 MASGGENLNASQFYFT 111
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 186 LGKIVIELRSDVTPKTCENFRAL 254
LG IVI+L SD P TC+NF L
Sbjct: 9 LGDIVIDLHSDKCPLTCKNFLKL 31
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 33.5 bits (73), Expect = 0.22
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 150 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALALARKASVT 281
+ F DV++D P+G+I+I L D P F ++ ++ KA +T
Sbjct: 93 KAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSI-VSGKAGIT 135
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 28.3 bits (60), Expect = 8.1
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +3
Query: 210 RSDVTPKTCENFRALALARKASVTRAPF-----SIVSSPISCCKEGTSPTITALGESPST 374
RS+ P + + + ++ R A+ TR P SIVSS SPT+ +L ++PS
Sbjct: 224 RSNPRPSSASSKKPVS--RPATPTRRPSTPTGPSIVSSKAPSRGTSPSPTVNSLSKAPSR 281
Query: 375 AISLKTRISPLSTLDLASSPWLMP 446
SP TL+ +S PW P
Sbjct: 282 G------TSPSPTLN-SSRPWKPP 298
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/71 (23%), Positives = 34/71 (47%)
Frame = +2
Query: 278 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 457
+KG +F RV+ +F++Q GD + ++ + +LKH ++ A +
Sbjct: 114 FKGFLFSRVVKHFVIQAGDSAEFDAVKDWALDRKNIDT---SLKHE-EFMVGTPKAKNEQ 169
Query: 458 NGSQFFITTVK 490
G +FFI + +
Sbjct: 170 GGFEFFIVSAQ 180
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,164,457
Number of Sequences: 28952
Number of extensions: 504429
Number of successful extensions: 1380
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1368
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2353558416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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