BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0793 (981 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_02_1133 - 26368323-26369457,26369556-26369635,26370145-263702... 95 6e-20 03_05_0491 - 24868261-24869383,24869482-24869561,24870193-248702... 93 2e-19 03_02_1011 + 13198641-13198899,13199471-13199604,13199805-131999... 56 6e-08 01_04_0053 - 15444421-15444747,15444905-15445116,15445198-154453... 53 4e-07 05_04_0401 - 20982923-20983106,20983129-20983186,20983322-209835... 40 0.003 12_01_0727 + 6446283-6449300 32 0.61 10_08_1002 + 22160109-22160264,22160374-22160484,22160612-221606... 31 1.1 02_05_0599 - 30251708-30251815,30251864-30251984,30252068-302522... 30 2.5 12_01_0731 - 6516894-6517473,6517485-6519574 29 4.3 08_02_1119 - 24436942-24437565,24438380-24438502,24439264-24439626 29 7.5 >12_02_1133 - 26368323-26369457,26369556-26369635,26370145-26370201, 26370508-26370601,26371006-26371092,26371179-26371268, 26371396-26371649 Length = 598 Score = 95.5 bits (227), Expect = 6e-20 Identities = 51/133 (38%), Positives = 80/133 (60%), Gaps = 6/133 (4%) Frame = +3 Query: 420 STKTPVEPWSNS*RTAQP*ERNILRLASALNELQAKLGA----AVTPYERNLELWKQLWR 587 S + P P NS T + + N R A+L +TP+E+N+++W+QLWR Sbjct: 109 SLRVPRRPPWNSRMTVEELDENERRAFLVWRRNLARLEENDKLVLTPFEKNIDIWRQLWR 168 Query: 588 TLEKSDIVLILLDARNPLLFRCVDLEKYAKE--QKCKSILLLNKADLTSEYERKCWG*IF 761 LE+SD++++++DAR+PL +RC DLE YAKE + ++++L+NKADL RK W F Sbjct: 169 VLERSDLLVMVVDARDPLFYRCPDLEVYAKEIDEHKRTMILVNKADLLPMNIRKKWADYF 228 Query: 762 HKENIRIVFFSGR 800 +I VF+S + Sbjct: 229 KAHDILYVFWSAK 241 Score = 41.5 bits (93), Expect = 0.001 Identities = 18/32 (56%), Positives = 20/32 (62%) Frame = +1 Query: 412 LTVPRRPQWNPGVTAEEQLNRERETFLDWRRH 507 L VPRRP WN +T EE ER FL WRR+ Sbjct: 110 LRVPRRPPWNSRMTVEELDENERRAFLVWRRN 141 >03_05_0491 - 24868261-24869383,24869482-24869561,24870193-24870249, 24870567-24870660,24871013-24871099,24871188-24871347, 24871440-24871674 Length = 611 Score = 93.5 bits (222), Expect = 2e-19 Identities = 43/110 (39%), Positives = 73/110 (66%), Gaps = 2/110 (1%) Frame = +3 Query: 477 ERNILRLASALNELQAKLGAAVTPYERNLELWKQLWRTLEKSDIVLILLDARNPLLFRCV 656 +R L L L+ +TP+E+N+++W+QLWR LE+SD++++++DAR+PL +RC Sbjct: 149 KRAFLEWRRNLARLEENEKLVLTPFEKNIDIWRQLWRVLERSDLLVMVVDARDPLFYRCP 208 Query: 657 DLEKYAKE--QKCKSILLLNKADLTSEYERKCWG*IFHKENIRIVFFSGR 800 DLE YA+E + +++LL+NKADL R+ W F + +I +F+S + Sbjct: 209 DLEVYAQEIDEHKRTLLLVNKADLLPLNVRQRWAEYFKQHDILYLFWSAK 258 Score = 42.3 bits (95), Expect = 6e-04 Identities = 17/32 (53%), Positives = 21/32 (65%) Frame = +1 Query: 412 LTVPRRPQWNPGVTAEEQLNRERETFLDWRRH 507 L VPRRP W P +T EE E+ FL+WRR+ Sbjct: 127 LKVPRRPPWTPQMTVEELDANEKRAFLEWRRN 158 >03_02_1011 + 13198641-13198899,13199471-13199604,13199805-13199934, 13200290-13200450,13200587-13200688,13200786-13200890, 13200965-13201093,13201180-13201320,13201855-13201955, 13202300-13202357,13202656-13202943 Length = 535 Score = 55.6 bits (128), Expect = 6e-08 Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 2/63 (3%) Frame = +3 Query: 567 LWKQLWRTLEKSDIVLILLDARNPLLFRCVDLEKYAKEQ-KCKS-ILLLNKADLTSEYER 740 +W +L++ ++ SD+V+ +LDAR+P+ RC LEK+ KE K K + LLNK DL + Sbjct: 212 IWGELYKVIDSSDVVVQVLDARDPMGTRCYHLEKHLKENAKHKHLVFLLNKCDLVPAWAT 271 Query: 741 KCW 749 K W Sbjct: 272 KGW 274 >01_04_0053 - 15444421-15444747,15444905-15445116,15445198-15445377, 15445572-15445836,15446308-15446522,15446611-15446784, 15446872-15447010,15447523-15447786 Length = 591 Score = 52.8 bits (121), Expect = 4e-07 Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 2/62 (3%) Frame = +3 Query: 570 WKQLWRTLEKSDIVLILLDARNPLLFRCVDLEKYAK--EQKCKSILLLNKADLTSEYERK 743 +K+L + +E SD++L +LDAR+PL RC+D+EK + + + +LLLNK DL + + Sbjct: 142 YKELVKVIEASDVILEVLDARDPLGTRCIDMEKMVRKADPSKRIVLLLNKIDLVPKESVE 201 Query: 744 CW 749 W Sbjct: 202 KW 203 >05_04_0401 - 20982923-20983106,20983129-20983186,20983322-20983503, 20983637-20983752,20984148-20984234,20984334-20984477, 20984556-20984672,20984790-20984936,20985717-20985938, 20986919-20987072,20987583-20987632,20987870-20987921, 20987985-20988211 Length = 579 Score = 39.9 bits (89), Expect = 0.003 Identities = 20/76 (26%), Positives = 41/76 (53%) Frame = +3 Query: 573 KQLWRTLEKSDIVLILLDARNPLLFRCVDLEKYAKEQKCKSILLLNKADLTSEYERKCWG 752 K+L L+ D+V+ + DAR PL ++ + + K I+++N+ D+ S +R W Sbjct: 295 KELKEQLKLMDVVIEVRDARIPLATSHPKMDAWLGNR--KRIIVMNREDMVSNEDRNAWA 352 Query: 753 *IFHKENIRIVFFSGR 800 F + ++V+ +G+ Sbjct: 353 SYFANQGTKVVYSNGQ 368 >12_01_0727 + 6446283-6449300 Length = 1005 Score = 32.3 bits (70), Expect = 0.61 Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 5/72 (6%) Frame = -1 Query: 567 VPSSSHKV---SLLHQA*LE-VHSMPTPI*ECFSLTVELFFSCYSRVPLGSS-WNSERLI 403 +PSS K+ SLL + LE V SMP+ I SLT+ FFSC P+ +S N +L Sbjct: 367 LPSSIGKLKSLSLLEVSGLELVGSMPSWISNLTSLTILKFFSCGLSGPIPASIGNLTKLT 426 Query: 402 KIRL*CYNGYFT 367 K+ L YN +F+ Sbjct: 427 KLAL--YNCHFS 436 >10_08_1002 + 22160109-22160264,22160374-22160484,22160612-22160689, 22160774-22160921,22161007-22161077,22161430-22161526, 22161603-22161790,22161960-22162223 Length = 370 Score = 31.5 bits (68), Expect = 1.1 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = +3 Query: 603 DIVLILLDARNPLLFRCVDLEKYAKEQKCKSILLLNKADLTSEYERKCW 749 D+VL + DAR P L + + E + +++LNKADL + + W Sbjct: 43 DLVLEVRDARVPAASAFAPLRRRSPEPDRRRLVVLNKADLADPSQTEKW 91 >02_05_0599 - 30251708-30251815,30251864-30251984,30252068-30252215, 30252303-30252480,30252587-30252625,30252704-30252799, 30252879-30253030,30253336-30253722,30253836-30253940, 30254083-30254098 Length = 449 Score = 30.3 bits (65), Expect = 2.5 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%) Frame = -1 Query: 771 SPYEIFSPNTFFHIHL*DQLCSAIIYFCIFVLLHTF--LDPHT*IIRD-SLHLTISIQYQ 601 +PYE F+ T + ++ ++CS + +F + L L PHT RD + L+ I+Y Sbjct: 166 TPYEAFNSKTISYKYMVQEMCSKMQFFMLSFRLEILRELLPHTDQKRDKASFLSEVIEYI 225 Query: 600 IFLKSSI 580 FL+ + Sbjct: 226 RFLQEKV 232 >12_01_0731 - 6516894-6517473,6517485-6519574 Length = 889 Score = 29.5 bits (63), Expect = 4.3 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 2/76 (2%) Frame = -1 Query: 588 SSITASKVPSSSHKVSLLHQA*LEVH-SMPTPI*ECFSLTVELFFSCYSRVPLGSS-WNS 415 S + S + S +SLL + LE+ SMP+ I SL V FFSC P+ +S N Sbjct: 371 SGVLPSSI-SQLKSLSLLEVSGLELAGSMPSWISNLTSLNVLKFFSCGLSGPIPASIGNL 429 Query: 414 ERLIKIRL*CYNGYFT 367 +L K+ L YN +F+ Sbjct: 430 TKLTKLAL--YNCHFS 443 >08_02_1119 - 24436942-24437565,24438380-24438502,24439264-24439626 Length = 369 Score = 28.7 bits (61), Expect = 7.5 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = -1 Query: 258 LGFKRPQSYPSFTSVVWSMVI-SSTCFLLRFLENLSLMRALPRDSLFFLPIILTYTTKQG 82 LGF R YPS S V+S+ CF + +P S LP +L G Sbjct: 183 LGFTRWVLYPSILSRVYSVFDWLQPCFDEVPSNIFTGQSQVPTHSGIALPAVLILRNCAG 242 Query: 81 EIQLPSCR 58 E+ P+CR Sbjct: 243 EVIFPACR 250 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 26,481,406 Number of Sequences: 37544 Number of extensions: 536400 Number of successful extensions: 1371 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1313 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1367 length of database: 14,793,348 effective HSP length: 82 effective length of database: 11,714,740 effective search space used: 2858396560 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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