BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0793
(981 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY047556-1|AAK77288.1| 606|Drosophila melanogaster GH06695p pro... 103 5e-22
AL035632-5|CAB38462.1| 606|Drosophila melanogaster EG:BACN32G11... 103 5e-22
AE014298-210|AAF45628.1| 606|Drosophila melanogaster CG14788-PA... 103 5e-22
AY118506-1|AAM49875.1| 575|Drosophila melanogaster LD10773p pro... 54 4e-07
AE014134-3278|AAF53920.1| 575|Drosophila melanogaster CG9320-PA... 54 4e-07
AY118455-1|AAM49824.1| 581|Drosophila melanogaster AT23067p pro... 46 6e-05
AE014297-2303|AAN13730.1| 581|Drosophila melanogaster CG3983-PB... 46 6e-05
AE014297-2302|AAF55384.3| 581|Drosophila melanogaster CG3983-PA... 46 6e-05
AY089700-1|AAL90438.1| 674|Drosophila melanogaster SD10213p pro... 46 1e-04
AF315579-1|AAL26879.1| 674|Drosophila melanogaster nuclear GTP ... 46 1e-04
AE013599-2507|AAF57834.1| 674|Drosophila melanogaster CG6501-PA... 46 1e-04
X85998-1|CAA59990.1| 110|Drosophila melanogaster elastin like p... 37 0.049
AF145670-1|AAD38645.1| 839|Drosophila melanogaster BcDNA.GH1169... 30 4.2
AE014134-961|AAF52282.1| 839|Drosophila melanogaster CG7238-PA ... 30 4.2
AY051659-1|AAK93083.1| 1390|Drosophila melanogaster LD15203p pro... 30 5.6
AF221101-1|AAF26743.1| 839|Drosophila melanogaster septin inter... 30 5.6
AF151375-1|AAF03776.1| 1390|Drosophila melanogaster Rho-kinase p... 30 5.6
AE014298-2432|AAF48631.1| 1390|Drosophila melanogaster CG9774-PA... 30 5.6
AY128467-1|AAM75060.1| 999|Drosophila melanogaster RE21674p pro... 29 7.4
AF235935-1|AAF60313.1| 1203|Drosophila melanogaster sodium/hydro... 29 7.4
AE014298-1477|AAF46612.1| 931|Drosophila melanogaster CG2111-PA... 29 7.4
>AY047556-1|AAK77288.1| 606|Drosophila melanogaster GH06695p
protein.
Length = 606
Score = 103 bits (246), Expect = 5e-22
Identities = 45/87 (51%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Frame = +3
Query: 540 VTPYERNLELWKQLWRTLEKSDIVLILLDARNPLLFRCVDLEKYAKEQKCK--SILLLNK 713
+TPYE+NLE W+QLWR +E+SD+V+ ++DARNPLLFR DLE+Y KE + +++L+NK
Sbjct: 155 MTPYEKNLEFWRQLWRVVERSDVVVQIVDARNPLLFRSADLERYVKEVEPSKMNMILVNK 214
Query: 714 ADLTSEYERKCWG*IFHKENIRIVFFS 794
+DL +E +R+ W F E IR F+S
Sbjct: 215 SDLLTEEQRRHWAEYFDSEGIRTAFYS 241
Score = 74.5 bits (175), Expect = 2e-13
Identities = 42/96 (43%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +1
Query: 241 GTFESQSVTAESSLQEFLSTAELAQREFTAEKLNLKYVK--------SVPSEVAIVTSQP 396
G SVT ESS Q FL TAELA EF AEKLN+ +V S E +
Sbjct: 47 GRLNLSSVTEESSFQAFLRTAELAGTEFQAEKLNITFVNPKQRVGLLSKTQEQRMHQKHD 106
Query: 397 DFDEPLTVPRRPQWNPGVTAEEQLNRERETFLDWRR 504
+ + L +PRRP+W +AEE + E E FLDWRR
Sbjct: 107 EHRDQLKIPRRPKWTKETSAEELVRAENEAFLDWRR 142
Score = 67.7 bits (158), Expect = 2e-11
Identities = 34/53 (64%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
Frame = +2
Query: 110 MGKKNK---ESLGRALIKDRFSKNRNKKHVEEXTMLHTTEVNDGYDWGRLNPS 259
MGKKNK +LGR LIKDRF + +K V+ TMLHTTE+ DGYDWGRLN S
Sbjct: 1 MGKKNKGGAPNLGRQLIKDRFGHTQRRK-VDNDTMLHTTELQDGYDWGRLNLS 52
>AL035632-5|CAB38462.1| 606|Drosophila melanogaster EG:BACN32G11.5
protein.
Length = 606
Score = 103 bits (246), Expect = 5e-22
Identities = 45/87 (51%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Frame = +3
Query: 540 VTPYERNLELWKQLWRTLEKSDIVLILLDARNPLLFRCVDLEKYAKEQKCK--SILLLNK 713
+TPYE+NLE W+QLWR +E+SD+V+ ++DARNPLLFR DLE+Y KE + +++L+NK
Sbjct: 155 MTPYEKNLEFWRQLWRVVERSDVVVQIVDARNPLLFRSADLERYVKEVEPSKMNMILVNK 214
Query: 714 ADLTSEYERKCWG*IFHKENIRIVFFS 794
+DL +E +R+ W F E IR F+S
Sbjct: 215 SDLLTEEQRRHWAEYFDSEGIRTAFYS 241
Score = 74.5 bits (175), Expect = 2e-13
Identities = 42/96 (43%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +1
Query: 241 GTFESQSVTAESSLQEFLSTAELAQREFTAEKLNLKYVK--------SVPSEVAIVTSQP 396
G SVT ESS Q FL TAELA EF AEKLN+ +V S E +
Sbjct: 47 GRLNLSSVTEESSFQAFLRTAELAGTEFQAEKLNITFVNPKQRVGLLSKTQEQRMHQKHD 106
Query: 397 DFDEPLTVPRRPQWNPGVTAEEQLNRERETFLDWRR 504
+ + L +PRRP+W +AEE + E E FLDWRR
Sbjct: 107 EHRDQLKIPRRPKWTKETSAEELVRAENEAFLDWRR 142
Score = 67.7 bits (158), Expect = 2e-11
Identities = 34/53 (64%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
Frame = +2
Query: 110 MGKKNK---ESLGRALIKDRFSKNRNKKHVEEXTMLHTTEVNDGYDWGRLNPS 259
MGKKNK +LGR LIKDRF + +K V+ TMLHTTE+ DGYDWGRLN S
Sbjct: 1 MGKKNKGGAPNLGRQLIKDRFGHTQRRK-VDNDTMLHTTELQDGYDWGRLNLS 52
>AE014298-210|AAF45628.1| 606|Drosophila melanogaster CG14788-PA
protein.
Length = 606
Score = 103 bits (246), Expect = 5e-22
Identities = 45/87 (51%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Frame = +3
Query: 540 VTPYERNLELWKQLWRTLEKSDIVLILLDARNPLLFRCVDLEKYAKEQKCK--SILLLNK 713
+TPYE+NLE W+QLWR +E+SD+V+ ++DARNPLLFR DLE+Y KE + +++L+NK
Sbjct: 155 MTPYEKNLEFWRQLWRVVERSDVVVQIVDARNPLLFRSADLERYVKEVEPSKMNMILVNK 214
Query: 714 ADLTSEYERKCWG*IFHKENIRIVFFS 794
+DL +E +R+ W F E IR F+S
Sbjct: 215 SDLLTEEQRRHWAEYFDSEGIRTAFYS 241
Score = 74.5 bits (175), Expect = 2e-13
Identities = 42/96 (43%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +1
Query: 241 GTFESQSVTAESSLQEFLSTAELAQREFTAEKLNLKYVK--------SVPSEVAIVTSQP 396
G SVT ESS Q FL TAELA EF AEKLN+ +V S E +
Sbjct: 47 GRLNLSSVTEESSFQAFLRTAELAGTEFQAEKLNITFVNPKQRVGLLSKTQEQRMHQKHD 106
Query: 397 DFDEPLTVPRRPQWNPGVTAEEQLNRERETFLDWRR 504
+ + L +PRRP+W +AEE + E E FLDWRR
Sbjct: 107 EHRDQLKIPRRPKWTKETSAEELVRAENEAFLDWRR 142
Score = 67.7 bits (158), Expect = 2e-11
Identities = 34/53 (64%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
Frame = +2
Query: 110 MGKKNK---ESLGRALIKDRFSKNRNKKHVEEXTMLHTTEVNDGYDWGRLNPS 259
MGKKNK +LGR LIKDRF + +K V+ TMLHTTE+ DGYDWGRLN S
Sbjct: 1 MGKKNKGGAPNLGRQLIKDRFGHTQRRK-VDNDTMLHTTELQDGYDWGRLNLS 52
>AY118506-1|AAM49875.1| 575|Drosophila melanogaster LD10773p
protein.
Length = 575
Score = 53.6 bits (123), Expect = 4e-07
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Frame = +3
Query: 507 LNELQAKLGAA----VTPYERNLELWKQLWRTLEKSDIVLILLDARNPLLFRCVDLEKY- 671
++ELQ K A ++ +E NLE W+QLWR LE SDI+LI++D R L L Y
Sbjct: 139 VDELQKKQRAGDSKELSLFELNLETWRQLWRVLEFSDILLIIVDVRYATLMFPPSLYDYI 198
Query: 672 AKEQKCKSILLLNKADLTSEYERKCW 749
K +I++ NK DL + W
Sbjct: 199 INTLKKHAIVVFNKVDLVEPHAVVAW 224
>AE014134-3278|AAF53920.1| 575|Drosophila melanogaster CG9320-PA
protein.
Length = 575
Score = 53.6 bits (123), Expect = 4e-07
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Frame = +3
Query: 507 LNELQAKLGAA----VTPYERNLELWKQLWRTLEKSDIVLILLDARNPLLFRCVDLEKY- 671
++ELQ K A ++ +E NLE W+QLWR LE SDI+LI++D R L L Y
Sbjct: 139 VDELQKKQRAGDSKELSLFELNLETWRQLWRVLEFSDILLIIVDVRYATLMFPPSLYDYI 198
Query: 672 AKEQKCKSILLLNKADLTSEYERKCW 749
K +I++ NK DL + W
Sbjct: 199 INTLKKHAIVVFNKVDLVEPHAVVAW 224
>AY118455-1|AAM49824.1| 581|Drosophila melanogaster AT23067p
protein.
Length = 581
Score = 46.4 bits (105), Expect = 6e-05
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +3
Query: 486 ILRLASALNELQAKLGAAVTPYERNLELWKQLWRTLEKSDIVLILLDARNPLLFRCVDLE 665
I+ A ++ + K AVT + + +K+ + +E +D+VL ++DAR+PL RC ++E
Sbjct: 113 IMHENDAQDQDEKKYKNAVTKEQSLKQYFKEFRKVIENADVVLEVVDARDPLGTRCNEVE 172
Query: 666 KYAK--EQKCKSILLLNKADLTSEYERKCWG*IFHKENIRIVFFSGRQN 806
+ + + +L+LNKADL W F + F + Q+
Sbjct: 173 RAVRGAPGNKRLVLVLNKADLVPRENLNNWIKYFRRSGPVTAFKASTQD 221
>AE014297-2303|AAN13730.1| 581|Drosophila melanogaster CG3983-PB,
isoform B protein.
Length = 581
Score = 46.4 bits (105), Expect = 6e-05
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +3
Query: 486 ILRLASALNELQAKLGAAVTPYERNLELWKQLWRTLEKSDIVLILLDARNPLLFRCVDLE 665
I+ A ++ + K AVT + + +K+ + +E +D+VL ++DAR+PL RC ++E
Sbjct: 113 IMHENDAQDQDEKKYKNAVTKEQSLKQYFKEFRKVIENADVVLEVVDARDPLGTRCNEVE 172
Query: 666 KYAK--EQKCKSILLLNKADLTSEYERKCWG*IFHKENIRIVFFSGRQN 806
+ + + +L+LNKADL W F + F + Q+
Sbjct: 173 RAVRGAPGNKRLVLVLNKADLVPRENLNNWIKYFRRSGPVTAFKASTQD 221
>AE014297-2302|AAF55384.3| 581|Drosophila melanogaster CG3983-PA,
isoform A protein.
Length = 581
Score = 46.4 bits (105), Expect = 6e-05
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +3
Query: 486 ILRLASALNELQAKLGAAVTPYERNLELWKQLWRTLEKSDIVLILLDARNPLLFRCVDLE 665
I+ A ++ + K AVT + + +K+ + +E +D+VL ++DAR+PL RC ++E
Sbjct: 113 IMHENDAQDQDEKKYKNAVTKEQSLKQYFKEFRKVIENADVVLEVVDARDPLGTRCNEVE 172
Query: 666 KYAK--EQKCKSILLLNKADLTSEYERKCWG*IFHKENIRIVFFSGRQN 806
+ + + +L+LNKADL W F + F + Q+
Sbjct: 173 RAVRGAPGNKRLVLVLNKADLVPRENLNNWIKYFRRSGPVTAFKASTQD 221
>AY089700-1|AAL90438.1| 674|Drosophila melanogaster SD10213p
protein.
Length = 674
Score = 45.6 bits (103), Expect = 1e-04
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +3
Query: 567 LWKQLWRTLEKSDIVLILLDARNPLLFRCVDLEKYAKEQKCKSIL--LLNKADLTSEYER 740
+W +L + ++ SD++L +LDAR+P+ R +E++ +++K L +LNK DL +
Sbjct: 211 IWNELHKVVDASDVLLQVLDARDPMGTRSKYIEEFLRKEKPHKHLFFILNKVDLVPVWVT 270
Query: 741 KCWG*IFHKENIRIVFFSGRQN 806
+ W I E I F + Q+
Sbjct: 271 QRWVAILSAEYPTIAFHASLQH 292
>AF315579-1|AAL26879.1| 674|Drosophila melanogaster nuclear GTP
binding protein protein.
Length = 674
Score = 45.6 bits (103), Expect = 1e-04
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +3
Query: 567 LWKQLWRTLEKSDIVLILLDARNPLLFRCVDLEKYAKEQKCKSIL--LLNKADLTSEYER 740
+W +L + ++ SD++L +LDAR+P+ R +E++ +++K L +LNK DL +
Sbjct: 211 IWNELHKVVDASDVLLQVLDARDPMGTRSKYIEEFLRKEKPHKHLFFILNKVDLVPVWVT 270
Query: 741 KCWG*IFHKENIRIVFFSGRQN 806
+ W I E I F + Q+
Sbjct: 271 QRWVAILSAEYPTIAFHASLQH 292
>AE013599-2507|AAF57834.1| 674|Drosophila melanogaster CG6501-PA
protein.
Length = 674
Score = 45.6 bits (103), Expect = 1e-04
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +3
Query: 567 LWKQLWRTLEKSDIVLILLDARNPLLFRCVDLEKYAKEQKCKSIL--LLNKADLTSEYER 740
+W +L + ++ SD++L +LDAR+P+ R +E++ +++K L +LNK DL +
Sbjct: 211 IWNELHKVVDASDVLLQVLDARDPMGTRSKYIEEFLRKEKPHKHLFFILNKVDLVPVWVT 270
Query: 741 KCWG*IFHKENIRIVFFSGRQN 806
+ W I E I F + Q+
Sbjct: 271 QRWVAILSAEYPTIAFHASLQH 292
>X85998-1|CAA59990.1| 110|Drosophila melanogaster elastin like
protein protein.
Length = 110
Score = 36.7 bits (81), Expect = 0.049
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 22 ALELVDPPGCRNSARGK 72
ALELVDPPGCRNSAR +
Sbjct: 9 ALELVDPPGCRNSARDR 25
>AF145670-1|AAD38645.1| 839|Drosophila melanogaster BcDNA.GH11690
protein.
Length = 839
Score = 30.3 bits (65), Expect = 4.2
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 513 ELQAKLGAAV-TPYERNLELWKQLWRTLEKSD 605
+LQA LG + P ++LELW+Q+W E D
Sbjct: 634 KLQATLGELIINPMHQDLELWQQVWEWHELID 665
>AE014134-961|AAF52282.1| 839|Drosophila melanogaster CG7238-PA
protein.
Length = 839
Score = 30.3 bits (65), Expect = 4.2
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 513 ELQAKLGAAV-TPYERNLELWKQLWRTLEKSD 605
+LQA LG + P ++LELW+Q+W E D
Sbjct: 634 KLQATLGELIINPMHQDLELWQQVWEWHELID 665
>AY051659-1|AAK93083.1| 1390|Drosophila melanogaster LD15203p protein.
Length = 1390
Score = 29.9 bits (64), Expect = 5.6
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Frame = +3
Query: 477 ERNILRLASALNELQAKLGAAVTPYERNLELWKQ------LWRTLEKSDIVLILLDARNP 638
E + L A NEL KLG YE ++ K+ L R+ + +I +L +N
Sbjct: 949 EAALATLKEAENELHKKLGQKAAEYEDLVQQHKKQQEELALMRSSKDEEITKLLDKCKNE 1008
Query: 639 LLFRCVDLEKYAKEQKCKSILL---LNKADLTSEYERK 743
+L + V + K A+ + L NKA T+E +K
Sbjct: 1009 VLLKQVAVNKLAEVMNRRDSDLPKQKNKARSTAELRKK 1046
>AF221101-1|AAF26743.1| 839|Drosophila melanogaster septin
interacting protein protein.
Length = 839
Score = 29.9 bits (64), Expect = 5.6
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 513 ELQAKLGAAVT-PYERNLELWKQLWRTLEKSD 605
+LQA LG + P ++LELW+Q+W E D
Sbjct: 634 KLQATLGELIIIPMHQDLELWQQVWEWHELID 665
>AF151375-1|AAF03776.1| 1390|Drosophila melanogaster Rho-kinase
protein.
Length = 1390
Score = 29.9 bits (64), Expect = 5.6
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Frame = +3
Query: 477 ERNILRLASALNELQAKLGAAVTPYERNLELWKQ------LWRTLEKSDIVLILLDARNP 638
E + L A NEL KLG YE ++ K+ L R+ + +I +L +N
Sbjct: 949 EAALATLKEAENELHKKLGQKAAEYEDLVQQHKKQQEELALMRSSKDEEITKLLDKCKNE 1008
Query: 639 LLFRCVDLEKYAKEQKCKSILL---LNKADLTSEYERK 743
+L + V + K A+ + L NKA T+E +K
Sbjct: 1009 VLLKQVAVNKLAEVMNRRDSDLPKQKNKARSTAELRKK 1046
>AE014298-2432|AAF48631.1| 1390|Drosophila melanogaster CG9774-PA
protein.
Length = 1390
Score = 29.9 bits (64), Expect = 5.6
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Frame = +3
Query: 477 ERNILRLASALNELQAKLGAAVTPYERNLELWKQ------LWRTLEKSDIVLILLDARNP 638
E + L A NEL KLG YE ++ K+ L R+ + +I +L +N
Sbjct: 949 EAALATLKEAENELHKKLGQKAAEYEDLVQQHKKQQEELALMRSSKDEEITKLLDKCKNE 1008
Query: 639 LLFRCVDLEKYAKEQKCKSILL---LNKADLTSEYERK 743
+L + V + K A+ + L NKA T+E +K
Sbjct: 1009 VLLKQVAVNKLAEVMNRRDSDLPKQKNKARSTAELRKK 1046
>AY128467-1|AAM75060.1| 999|Drosophila melanogaster RE21674p protein.
Length = 999
Score = 29.5 bits (63), Expect = 7.4
Identities = 19/78 (24%), Positives = 32/78 (41%)
Frame = +1
Query: 253 SQSVTAESSLQEFLSTAELAQREFTAEKLNLKYVKSVPSEVAIVTSQPDFDEPLTVPRRP 432
S E+ Q +S + Q T + N + + P+E+ +V D+D+ LT +
Sbjct: 820 SNKEAKENVKQNHVSFHDFQQNGTTKQLTNAEECQQNPNEINVVGPSDDWDDGLTFTAKS 879
Query: 433 QWNPGVTAEEQLNRERET 486
EE N RE+
Sbjct: 880 SLAEHPIPEEDRNLSRES 897
>AF235935-1|AAF60313.1| 1203|Drosophila melanogaster sodium/hydrogen
exchanger protein protein.
Length = 1203
Score = 29.5 bits (63), Expect = 7.4
Identities = 19/78 (24%), Positives = 32/78 (41%)
Frame = +1
Query: 253 SQSVTAESSLQEFLSTAELAQREFTAEKLNLKYVKSVPSEVAIVTSQPDFDEPLTVPRRP 432
S E+ Q +S + Q T + N + + P+E+ +V D+D+ LT +
Sbjct: 794 SNKEAKENVKQNHVSFHDFQQNGTTKQLTNAEECQQNPNEINVVGPSDDWDDGLTFTAKS 853
Query: 433 QWNPGVTAEEQLNRERET 486
EE N RE+
Sbjct: 854 SLAEHPIPEEDRNLSRES 871
>AE014298-1477|AAF46612.1| 931|Drosophila melanogaster CG2111-PA
protein.
Length = 931
Score = 29.5 bits (63), Expect = 7.4
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -1
Query: 519 EVHSMPTPI*ECFSLTVEL-FFSCYSRVPLGSSWNSERLIKIRL 391
+V ++ TP+ EC S EL +FS + + L SERLIKI L
Sbjct: 852 KVVNLMTPLIECLSTPKELLYFSKFFKEILRDMNGSERLIKILL 895
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,160,370
Number of Sequences: 53049
Number of extensions: 919796
Number of successful extensions: 2270
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2258
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4935487923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -