Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0793
(981 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical ... 109 3e-24
AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical ... 87 1e-17
AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical ... 87 1e-17
AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical ... 48 8e-06
AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical ... 48 8e-06
AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical ... 48 8e-06
Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical pr... 38 0.011
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 33 0.41
U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical pr... 31 1.7
U40412-3|AAV28343.2| 381|Caenorhabditis elegans Hypothetical pr... 30 2.2
AL032633-2|CAA21595.2| 428|Caenorhabditis elegans Hypothetical ... 29 3.8
AL161712-17|CAC70139.1| 86|Caenorhabditis elegans Hypothetical... 29 5.1
AF150094-1|AAD40000.1| 86|Caenorhabditis elegans small zinc fi... 29 5.1
Z81146-3|CAB03524.1| 496|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z73978-2|CAA98292.2| 728|Caenorhabditis elegans Hypothetical pr... 28 8.8
>AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical
protein C53H9.2a protein.
Length = 554
Score = 109 bits (262), Expect = 3e-24
Identities = 56/121 (46%), Positives = 77/121 (63%), Gaps = 2/121 (1%)
Frame = +3
Query: 438 EPWSNS*RTAQP*ERNILRLASALNELQAKLGAAVTPYERNLELWKQLWRTLEKSDIVLI 617
E W N + L+ S L+ELQ G +TP+ERN ++W++LWR +EKSDI++
Sbjct: 127 ELWENMEDLTKLENEAFLQWRSDLSELQEVDGLVLTPFERNPDMWRELWRVVEKSDIIVQ 186
Query: 618 LLDARNPLLFRCVDLEKYAKE-QKCKSILLL-NKADLTSEYERKCWG*IFHKENIRIVFF 791
++DARNPLLFR DL+ Y KE K ILLL NKADL ++ W F KENI+++F+
Sbjct: 187 IVDARNPLLFRSKDLDDYVKEVDPAKQILLLVNKADLLKPEQQASWREYFEKENIKVIFW 246
Query: 792 S 794
S
Sbjct: 247 S 247
Score = 55.6 bits (128), Expect = 5e-08
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Frame = +1
Query: 259 SVTAESSLQEFLSTAELAQREFTAEKLNLKYVKS-----VPSEV---AIVTSQPDFDEPL 414
SVT E+SL+EFL+ AELA EFTAEK K ++ VP+ + A + Q + + L
Sbjct: 59 SVTDETSLEEFLAKAELAGTEFTAEKEQFKIIEKNSAIVVPTRLDYRANLDLQKENEHRL 118
Query: 415 TVPRRPQWNPGVTAEEQLNRERETFLDWR 501
+PRRP E+ E E FL WR
Sbjct: 119 RIPRRPAKELWENMEDLTKLENEAFLQWR 147
>AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical
protein C53H9.2c protein.
Length = 247
Score = 87.4 bits (207), Expect = 1e-17
Identities = 41/78 (52%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Frame = +3
Query: 567 LWKQLWRTLEKSDIVLILLDARNPLLFRCVDLEKYAKE-QKCKSILLL-NKADLTSEYER 740
+W++LWR +EKSDI++ ++DARNPLLFR DL+ Y KE K ILLL NKADL ++
Sbjct: 1 MWRELWRVVEKSDIIVQIVDARNPLLFRSKDLDDYVKEVDPAKQILLLVNKADLLKPEQQ 60
Query: 741 KCWG*IFHKENIRIVFFS 794
W F KENI+++F+S
Sbjct: 61 ASWREYFEKENIKVIFWS 78
>AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical
protein C53H9.2b protein.
Length = 385
Score = 87.4 bits (207), Expect = 1e-17
Identities = 41/78 (52%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Frame = +3
Query: 567 LWKQLWRTLEKSDIVLILLDARNPLLFRCVDLEKYAKE-QKCKSILLL-NKADLTSEYER 740
+W++LWR +EKSDI++ ++DARNPLLFR DL+ Y KE K ILLL NKADL ++
Sbjct: 1 MWRELWRVVEKSDIIVQIVDARNPLLFRSKDLDDYVKEVDPAKQILLLVNKADLLKPEQQ 60
Query: 741 KCWG*IFHKENIRIVFFS 794
W F KENI+++F+S
Sbjct: 61 ASWREYFEKENIKVIFWS 78
>AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical
protein T19A6.2c protein.
Length = 610
Score = 48.4 bits (110), Expect = 8e-06
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +3
Query: 567 LWKQLWRTLEKSDIVLILLDARNPLLFRCVDLEKYAKEQKCKS--ILLLNKADLTSEYER 740
+W +L++ ++ SD+V+ ++DAR+P+ RC +E++ +++K + ++NK DL +
Sbjct: 221 VWGELYKVIDSSDVVVQVVDARDPMGTRCRHVEEFLRKEKPHKHLVTVINKVDLVPTWVT 280
Query: 741 KCWG*IFHKENIRIVFFSGRQN 806
+ W KE I F + N
Sbjct: 281 RKWIGELSKEMPTIAFHASINN 302
>AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical
protein T19A6.2b protein.
Length = 592
Score = 48.4 bits (110), Expect = 8e-06
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +3
Query: 567 LWKQLWRTLEKSDIVLILLDARNPLLFRCVDLEKYAKEQKCKS--ILLLNKADLTSEYER 740
+W +L++ ++ SD+V+ ++DAR+P+ RC +E++ +++K + ++NK DL +
Sbjct: 162 VWGELYKVIDSSDVVVQVVDARDPMGTRCRHVEEFLRKEKPHKHLVTVINKVDLVPTWVT 221
Query: 741 KCWG*IFHKENIRIVFFSGRQN 806
+ W KE I F + N
Sbjct: 222 RKWIGELSKEMPTIAFHASINN 243
>AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical
protein T19A6.2a protein.
Length = 651
Score = 48.4 bits (110), Expect = 8e-06
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +3
Query: 567 LWKQLWRTLEKSDIVLILLDARNPLLFRCVDLEKYAKEQKCKS--ILLLNKADLTSEYER 740
+W +L++ ++ SD+V+ ++DAR+P+ RC +E++ +++K + ++NK DL +
Sbjct: 221 VWGELYKVIDSSDVVVQVVDARDPMGTRCRHVEEFLRKEKPHKHLVTVINKVDLVPTWVT 280
Query: 741 KCWG*IFHKENIRIVFFSGRQN 806
+ W KE I F + N
Sbjct: 281 RKWIGELSKEMPTIAFHASINN 302
>Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical
protein K01C8.9 protein.
Length = 556
Score = 37.9 bits (84), Expect = 0.011
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +3
Query: 585 RTLEKSDIVLILLDARNPLLFRCVDLEKYAKEQKCKSILLLNKADLTSEYERKCW 749
+T+E +D+++ +LDAR+PL R +E + + +LLLNK DL + W
Sbjct: 143 KTVEIADVIIQVLDARDPLGSRSKSVEDQVLKGGKRLVLLLNKIDLVPRENVQKW 197
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 32.7 bits (71), Expect = 0.41
Identities = 26/86 (30%), Positives = 39/86 (45%)
Frame = -2
Query: 494 SKNVSLSRLSCSSAVTPGFHWGLRGTVRGSSKSGCDVTMATSLGTDFTYFRLSFSAVNSL 315
S +S S S +PG TVRGS+ SG VT ++ G+ + S+ SL
Sbjct: 1197 SPAISTSTQQSVSTNSPGSTVTQPSTVRGSTSSGSTVTTGSTEGSSTS----GSSSATSL 1252
Query: 314 CASSAVERNSWSEDSAVTDWDSNVPN 237
+SS V S S + + + + PN
Sbjct: 1253 SSSSPVPSTSQSPNPSTSGSSTPTPN 1278
>U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical
protein F10G2.3 protein.
Length = 417
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = -1
Query: 630 LHLTISIQYQIFLKSSITASKVPSSSHKVSLLHQA*LEVHSMP 502
+HL I + + F S+T+SKVP +++ +L++ L++ + P
Sbjct: 1 MHLLIFVLFYFFNSYSVTSSKVPVCTNEFTLINNKCLKLFTTP 43
>U40412-3|AAV28343.2| 381|Caenorhabditis elegans Hypothetical
protein F46G11.2 protein.
Length = 381
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 364 PSEVAIVTSQPDFDEPL-TVPRRPQWNPGVTAEEQLNRER 480
PS VTS PDFDEP P++P + ++ NR+R
Sbjct: 175 PSTEPPVTSIPDFDEPTDDEPQKPMMDDPAQLQDDDNRKR 214
>AL032633-2|CAA21595.2| 428|Caenorhabditis elegans Hypothetical
protein Y106G6A.2a protein.
Length = 428
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 4/25 (16%)
Frame = -1
Query: 714 LCSAIIYFCIFV-LLHT---FLDPH 652
LC A+IY CIF+ + HT + DPH
Sbjct: 347 LCDAVIYLCIFIGMSHTKLKYTDPH 371
>AL161712-17|CAC70139.1| 86|Caenorhabditis elegans Hypothetical
protein Y66D12A.22 protein.
Length = 86
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -3
Query: 169 FRESIFDEGSPKRLFILLAHYLNLHYKTGRDTTSLVPNSCSPGDPLVLERXA 14
FRES +G L +A YL++H K G+ TS+ S GD L++ A
Sbjct: 38 FRESELTKGEAVCLDRCVAKYLDVHEKLGKRLTSM-----SQGDEAALQKIA 84
>AF150094-1|AAD40000.1| 86|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 86
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -3
Query: 169 FRESIFDEGSPKRLFILLAHYLNLHYKTGRDTTSLVPNSCSPGDPLVLERXA 14
FRES +G L +A YL++H K G+ TS+ S GD L++ A
Sbjct: 38 FRESELTKGEAVCLDRCVAKYLDVHEKLGKRLTSM-----SQGDEAALQKIA 84
>Z81146-3|CAB03524.1| 496|Caenorhabditis elegans Hypothetical
protein K10D11.5 protein.
Length = 496
Score = 28.3 bits (60), Expect = 8.8
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 751 PQHFLSYSLVRS-ALFSNNILLHFC-SFAYFSRSTHLNNKGFLAS 623
PQ FL Y VR+ L N L+F S + FS + + KGF AS
Sbjct: 332 PQEFLGY--VRTYVLTGTNAFLNFTRSSSQFSSNARIGRKGFFAS 374
>Z73978-2|CAA98292.2| 728|Caenorhabditis elegans Hypothetical
protein ZC302.1 protein.
Length = 728
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/74 (21%), Positives = 36/74 (48%)
Frame = +1
Query: 241 GTFESQSVTAESSLQEFLSTAELAQREFTAEKLNLKYVKSVPSEVAIVTSQPDFDEPLTV 420
G+ + S+T E +LQ+ ++ R+F ++ + L+ V+ + + ++ P P+
Sbjct: 328 GSTVATSLTPEEALQKNAFLIKIKGRKFASKPIPLQTVRPMVCDELLLDKIPPGSRPILK 387
Query: 421 PRRPQWNPGVTAEE 462
RP+ G +E
Sbjct: 388 TDRPKHTDGRYIDE 401
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,752,508
Number of Sequences: 27780
Number of extensions: 482809
Number of successful extensions: 1232
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2552786072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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