Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0792
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    35   8e-04
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.7  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   7.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 34.7 bits (76), Expect = 8e-04
 Identities = 12/35 (34%), Positives = 24/35 (68%)
 Frame = -3

Query: 147 LIFWTLSLSLVCDYEAFYSFVLRKIHISLLIIFYH 43
           L+F+ + + L+C Y  +Y+F+L  +H+ LL+  Y+
Sbjct: 226 LLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYY 260



 Score = 29.1 bits (62), Expect = 0.039
 Identities = 9/36 (25%), Positives = 22/36 (61%)
 Frame = -3

Query: 141 FWTLSLSLVCDYEAFYSFVLRKIHISLLIIFYHTIL 34
           F+   + L+C Y  +Y+F++  +H+  L+  Y+ ++
Sbjct: 103 FYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVV 138



 Score = 25.8 bits (54), Expect = 0.36
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -3

Query: 120 LVCDYEAFYSFVLRKIHISLLIIFYH 43
           L+C Y  + +F++  +H+  L+  YH
Sbjct: 143 LLCIYYFYCAFIIFTVHLLFLLCIYH 168



 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -3

Query: 147 LIFWTLSLSLVCDYEAFYSFVLRKIHISLLIIF 49
           +IF    L L+C Y  F +F++  +H+     F
Sbjct: 154 IIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAF 186


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 244 IQNKGKQNSKL 276
           +QNKGK+ SKL
Sbjct: 123 LQNKGKKESKL 133


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 288 YFRLEFTILFTLILDY 241
           YFR+ F  +FTLI DY
Sbjct: 222 YFRVAFPSVFTLI-DY 236


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,856
Number of Sequences: 336
Number of extensions: 4520
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)