Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0791
         (745 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   1.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.0  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   2.0  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   3.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.0  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   7.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.9  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 477 VLEDKPDLLCQPSLPIVYIY 418
           V E K +L CQP++P V  Y
Sbjct: 237 VNERKENLTCQPAVPYVPFY 256


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 572  KLNLTLPPLRDEILLQFLQLNS 637
            K++  L  LRD+++  FL LNS
Sbjct: 1213 KVSAELKDLRDKMVFTFLMLNS 1234


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 572  KLNLTLPPLRDEILLQFLQLNS 637
            K++  L  LRD+++  FL LNS
Sbjct: 1213 KVSAELKDLRDKMVFTFLMLNS 1234


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +3

Query: 417 NRCKQWVKMVGKEDLAYLQVHMLHDLKHVCEHISQD 524
           N+ K    ++G      + +  L+ L HVC+++S +
Sbjct: 243 NQAKYCTTLIGLIKNCVIVIFELYYLSHVCQNVSTE 278


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = +3

Query: 375 LTEKRFFARFPLDVNRCKQWVKMVGKEDLAYLQVHMLHDLKH 500
           LT ++ F   P       +W+KMV  E      ++  H  +H
Sbjct: 252 LTHRKPF--HPASTQSLSRWIKMVLAESGVDTSIYTAHSTRH 291


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = +3

Query: 96  FFNIAYKFTLIFFEKRLCSQNDFVTCFFFRVNFNICC*EIYSSCLVLFL 242
           +F  A+    +     LC  + F     F ++   CC  I+ +  +LFL
Sbjct: 148 YFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFL 196


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 310 ANFLTCLILIVLVKFVVSKKDILLKNGFSQGF 405
           ANF+     + L   +V  K  ++K+ F+QG+
Sbjct: 66  ANFMLTFFNVSLRIILVFSKGKVIKSFFNQGY 97


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +3

Query: 651 YIFSILYIFYRIEIFLVYKNLYYGKKFVL 737
           Y+F++ YI+Y +    +    Y   KF++
Sbjct: 152 YLFTVYYIYYSVHEASIINFGYTLAKFMI 180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,846
Number of Sequences: 336
Number of extensions: 3869
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)