Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0791
         (745 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016685-9|AAG24149.1|  330|Caenorhabditis elegans Seven tm rece...    29   3.5  
Z82282-6|CAB05273.1|  147|Caenorhabditis elegans Hypothetical pr...    29   4.6  
U21310-5|AAY86191.1|  148|Caenorhabditis elegans Hypothetical pr...    29   4.6  
AF099002-3|AAO91691.1|  570|Caenorhabditis elegans Hypothetical ...    28   8.0  
AF099002-2|AAC68740.2|  556|Caenorhabditis elegans Hypothetical ...    28   8.0  
AF099002-1|AAK68587.1|  559|Caenorhabditis elegans Hypothetical ...    28   8.0  

>AF016685-9|AAG24149.1|  330|Caenorhabditis elegans Seven tm
           receptor protein 87 protein.
          Length = 330

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 744 LELTQIFYHSINFYTPKKFQSCKK 673
           L + +I Y+  N+Y  KKF  CKK
Sbjct: 175 LTMEEIVYNGPNYYVCKKFNDCKK 198


>Z82282-6|CAB05273.1|  147|Caenorhabditis elegans Hypothetical
           protein T07G12.8 protein.
          Length = 147

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +3

Query: 639 KVIGYIFS-ILYIFYRIEIFLVYKNLYYGKKF 731
           ++I Y FS  +  FY+I+IF+ Y+ L   +KF
Sbjct: 48  RIIFYFFSNFILFFYKIKIFMNYQLLLRNRKF 79


>U21310-5|AAY86191.1|  148|Caenorhabditis elegans Hypothetical
           protein F40H6.6 protein.
          Length = 148

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +3

Query: 651 YIFSILYIFYRIEIFLVYKNLYYGKKF 731
           + F   +IFY+I+I++ Y+ L   +KF
Sbjct: 117 FFFKFYFIFYKIKIYMNYQLLLMNRKF 143


>AF099002-3|AAO91691.1|  570|Caenorhabditis elegans Hypothetical
           protein Y71H10B.1c protein.
          Length = 570

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 315 LFNMPDTHRTCEVCGIKERH 374
           LFNMP+TH  C++    ++H
Sbjct: 147 LFNMPETHLICQLIDFFDKH 166


>AF099002-2|AAC68740.2|  556|Caenorhabditis elegans Hypothetical
           protein Y71H10B.1a protein.
          Length = 556

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 315 LFNMPDTHRTCEVCGIKERH 374
           LFNMP+TH  C++    ++H
Sbjct: 133 LFNMPETHLICQLIDFFDKH 152


>AF099002-1|AAK68587.1|  559|Caenorhabditis elegans Hypothetical
           protein Y71H10B.1b protein.
          Length = 559

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 315 LFNMPDTHRTCEVCGIKERH 374
           LFNMP+TH  C++    ++H
Sbjct: 136 LFNMPETHLICQLIDFFDKH 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,969,574
Number of Sequences: 27780
Number of extensions: 351729
Number of successful extensions: 975
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)