BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0791 (745 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 23 3.0 AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 4.0 AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 4.0 DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 7.0 DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 7.0 AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 7.0 AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 22 7.0 AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 7.0 AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 9.2 >AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly protein MRJP2 protein. Length = 452 Score = 23.0 bits (47), Expect = 3.0 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = -2 Query: 267 NNNNYNLQTKTRPNRRSKFLNSKY*N*HEKKNTLQN 160 NN N N+Q N ++ N K N + +KN QN Sbjct: 417 NNQNDNIQNTNNQNDNNQKNNKK--NANNQKNNNQN 450 >AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-activated ion channelvariant L protein. Length = 664 Score = 22.6 bits (46), Expect = 4.0 Identities = 8/28 (28%), Positives = 16/28 (57%) Frame = +1 Query: 409 WMSIDVNNG*RWLAKKIWLIFKYICYMI 492 W++I+ WL + W +FK + +M+ Sbjct: 311 WVAINELQDSFWLEQYSWALFKAMSHML 338 >AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-activated ion channel protein. Length = 632 Score = 22.6 bits (46), Expect = 4.0 Identities = 8/28 (28%), Positives = 16/28 (57%) Frame = +1 Query: 409 WMSIDVNNG*RWLAKKIWLIFKYICYMI 492 W++I+ WL + W +FK + +M+ Sbjct: 279 WVAINELQDSFWLEQYSWALFKAMSHML 306 >DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride channel protein. Length = 447 Score = 21.8 bits (44), Expect = 7.0 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +3 Query: 84 MAF*FFNIAYKFTLIFFEK 140 + F FFN+AY T +F E+ Sbjct: 425 IVFAFFNLAYWSTYLFREE 443 >DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride channel protein. Length = 447 Score = 21.8 bits (44), Expect = 7.0 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +3 Query: 84 MAF*FFNIAYKFTLIFFEK 140 + F FFN+AY T +F E+ Sbjct: 425 IVFAFFNLAYWSTYLFREE 443 >AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisphosphate 3-kinaseisoform C protein. Length = 548 Score = 21.8 bits (44), Expect = 7.0 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +1 Query: 469 FKYICYMI*NMFVSTFLKTRLYKIKEALK 555 F++ C M + V T+L++ L K KE K Sbjct: 339 FEHPCVMDCKVGVRTYLESELAKAKERPK 367 >AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisphosphate 3-kinaseisoform B protein. Length = 463 Score = 21.8 bits (44), Expect = 7.0 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +1 Query: 469 FKYICYMI*NMFVSTFLKTRLYKIKEALK 555 F++ C M + V T+L++ L K KE K Sbjct: 254 FEHPCVMDCKVGVRTYLESELAKAKERPK 282 >AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisphosphate 3-kinaseisoform A protein. Length = 782 Score = 21.8 bits (44), Expect = 7.0 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +1 Query: 469 FKYICYMI*NMFVSTFLKTRLYKIKEALK 555 F++ C M + V T+L++ L K KE K Sbjct: 573 FEHPCVMDCKVGVRTYLESELAKAKERPK 601 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 21.4 bits (43), Expect = 9.2 Identities = 8/10 (80%), Positives = 9/10 (90%) Frame = -2 Query: 78 FLNNSMCYSS 49 FLNNSMC S+ Sbjct: 628 FLNNSMCTST 637 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 186,943 Number of Sequences: 438 Number of extensions: 4111 Number of successful extensions: 16 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 16 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 23266665 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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