Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0790
         (757 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.12 
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    25   0.49 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.0  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   8.0  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = -3

Query: 683 IPLQFYECINYFIYSSFFILSEYFQYHIHWVIF*RIHYVI*VILC 549
           + L F  CI YF+   FF+L  Y+ ++  ++IF  +H +   +LC
Sbjct: 125 VHLLFLLCIYYFVVPLFFLLCIYY-FYCAFIIF-TVHLLF--LLC 165



 Score = 24.6 bits (51), Expect = 0.86
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3

Query: 677 LQFYECINYFIYSSFFILSEYFQYHIHWVIF*RIHY 570
           L F  CI YF YS+F I + +  ++   +I   I+Y
Sbjct: 206 LLFLPCIYYF-YSAFIIFTIHLLFYCVLIILLCIYY 240



 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 686 VIPLQFYECINYFIYSSFFILSEYFQY 606
           V+PL F  CI YF Y +F I + +  +
Sbjct: 137 VVPLFFLLCIYYF-YCAFIIFTVHLLF 162



 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 399 FYLNNLIYLFQLLFVHVKILLIVVY 325
           FY   +I+   LLF  V I+L+ +Y
Sbjct: 215 FYSAFIIFTIHLLFYCVLIILLCIY 239



 Score = 22.2 bits (45), Expect = 4.6
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 11/55 (20%)
 Frame = -2

Query: 441 YFYSTINQYGGNQLFYLNNLI--------YLFQLLFVHVKILLIV---VYLHLQF 310
           YFYS    +  + LFY   +I        Y F L  VH+ +L+ +    Y+HL F
Sbjct: 214 YFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLF 268


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 243 SSKQDFNHVHFVSNRKIHTNIFYLVTRNVRLTET 142
           + KQ + H+   SN  I  +    +TR++RLT T
Sbjct: 131 NEKQSYFHIATTSNEFIRVHHSGSITRSIRLTIT 164


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 96  TLRICKLIDKIKNS*KFRLIVHFELQDKKC 185
           T  IC L+ K K    F+ ++HF   D KC
Sbjct: 91  TTWICTLLKKDKLLELFKRLIHF---DTKC 117


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 96  TLRICKLIDKIKNS*KFRLIVHFELQDKKC 185
           T  IC L+ K K    F+ ++HF   D KC
Sbjct: 109 TTWICTLLKKDKLLELFKRLIHF---DTKC 135


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 670 FMNASTILFIVAFSFCLNTFN 608
           F+++  I+F+ +  FCL  FN
Sbjct: 9   FLHSVRIVFVQSEIFCLVNFN 29


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,685
Number of Sequences: 336
Number of extensions: 4224
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)