Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0790
(757 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006791-5|AAF60739.1| 330|Caenorhabditis elegans Hypothetical ... 32 0.51
Z79756-1|CAB02120.2| 494|Caenorhabditis elegans Hypothetical pr... 31 0.67
U56965-3|AAB52664.2| 467|Caenorhabditis elegans Hypothetical pr... 30 2.0
U42842-3|AAA83593.1| 449|Caenorhabditis elegans Intestinal acid... 29 2.7
AF016681-6|AAB66175.2| 317|Caenorhabditis elegans Hypothetical ... 29 2.7
AC024791-8|AAF60652.1| 230|Caenorhabditis elegans Hypothetical ... 29 3.6
AL034488-14|CAE11311.1| 341|Caenorhabditis elegans Hypothetical... 29 4.7
U64844-10|AAB18310.1| 448|Caenorhabditis elegans Hypothetical p... 28 6.2
AF067616-4|AAC19193.1| 373|Caenorhabditis elegans Hypothetical ... 28 6.2
Z68000-4|CAA91972.4| 1342|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z50739-4|CAA90605.4| 1342|Caenorhabditis elegans Hypothetical pr... 28 8.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 8.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 8.2
>AC006791-5|AAF60739.1| 330|Caenorhabditis elegans Hypothetical
protein Y4C6A.3 protein.
Length = 330
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = -1
Query: 370 SAALCSRKNSSNCSVSTLAVSSRCSHKYSIFTLVLTRLKDNLKFKTRFQSCSLC 209
+ A+CS K S NCS T + +C H TL +++ LK + SC +C
Sbjct: 254 TCAICSTKYSKNCSTQTPRILDKCGH-----TLCEGCIQNILKHSNQI-SCPIC 301
>Z79756-1|CAB02120.2| 494|Caenorhabditis elegans Hypothetical
protein F53C11.1 protein.
Length = 494
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 527 ISPTIWKPPTFFTMVFQTS*PGSTHFRFNISI 432
ISP+IW P T T + T+ S RFNI++
Sbjct: 358 ISPSIWNPTTLKTPSYSTNFTSSETVRFNINL 389
>U56965-3|AAB52664.2| 467|Caenorhabditis elegans Hypothetical
protein C15H9.4 protein.
Length = 467
Score = 29.9 bits (64), Expect = 2.0
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = +3
Query: 279 KMEYLCEHLDETASVDTLQLEEFLREQ---RAAEINRL---NYLSKKVDYLHTDLLYYRN 440
++++ E L+E T +LEE L E + AEI L N ++ +VDY H D +RN
Sbjct: 301 EIKFYAEALEEER-FKTTKLEEILNEAVELQQAEIATLKEQNLMATRVDYQHND--RFRN 357
Query: 441 IKSKMGAAWL*SLENH 488
++ M SL+NH
Sbjct: 358 VEENME-----SLQNH 368
>U42842-3|AAA83593.1| 449|Caenorhabditis elegans Intestinal acid
phosphatase protein1 protein.
Length = 449
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 3/23 (13%)
Frame = +1
Query: 34 NNIKNYIY---DTQYYVYFSASL 93
NN+KNYIY DT Y +FSA L
Sbjct: 310 NNLKNYIYSAHDTTIYAFFSALL 332
>AF016681-6|AAB66175.2| 317|Caenorhabditis elegans Hypothetical
protein F22E5.11 protein.
Length = 317
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -2
Query: 384 LIYLFQLLFVHVKILLIVVYLHLQFHQDVHINIPF 280
+I L +L+F+ + I+L+V LH+ F H+ + F
Sbjct: 54 MILLLKLIFLILFIVLVVFTLHILFTNSYHLKLEF 88
>AC024791-8|AAF60652.1| 230|Caenorhabditis elegans Hypothetical
protein Y47G6A.9 protein.
Length = 230
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 501 GGFPNCWRDVGHLLGVTQDDLNYIMNSLKDDPVDMVLKV 617
GG N R V + LG+ + D+ +M+ K++P + KV
Sbjct: 17 GGSSNTMRSVANALGIARYDMAKMMSQQKNEPPQLYPKV 55
>AL034488-14|CAE11311.1| 341|Caenorhabditis elegans Hypothetical
protein Y54G11A.15 protein.
Length = 341
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 284 HFYISFNKTKR*SEVQNKISIMFTLYQTGKYILTFFI 174
++YIS N E+ N I+FTL+ T I T FI
Sbjct: 263 YWYISINSEFYSQELNNISIILFTLHGTSSSIATIFI 299
>U64844-10|AAB18310.1| 448|Caenorhabditis elegans Hypothetical
protein T22F3.7 protein.
Length = 448
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -1
Query: 670 FMNASTILFIVAFSFCLNTFNTISTGSS--FKEFIM*FRSSCVTPNKWPTSLQQFGNPPL 497
F S L V+ F ++TFNTIS G S F I F +T +W L F P L
Sbjct: 333 FALISDKLKFVSEIFKIHTFNTISVGLSGLFFACIGQFSHVVITAIQWMKCLALFVAPAL 392
Query: 496 SSLW 485
S++
Sbjct: 393 VSIF 396
>AF067616-4|AAC19193.1| 373|Caenorhabditis elegans Hypothetical
protein F29C4.6 protein.
Length = 373
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 654 VDAFIKLQRYDILLAIGKSTVDYGLXILI 740
+D IK R D LLA+ K+ V+YGL + I
Sbjct: 95 IDEGIKGYRDDSLLAVEKNRVEYGLPLTI 123
>Z68000-4|CAA91972.4| 1342|Caenorhabditis elegans Hypothetical
protein F13D2.1 protein.
Length = 1342
Score = 27.9 bits (59), Expect = 8.2
Identities = 25/114 (21%), Positives = 46/114 (40%)
Frame = +3
Query: 378 RLNYLSKKVDYLHTDLLYYRNIKSKMGAAWL*SLENHSEESGGFPNCWRDVGHLLGVTQD 557
RLNY++ + DY+ + L Y + A + +L N + GH L
Sbjct: 246 RLNYITLRNDYMIHEYLDYLIFGKQSQGAKILNLVNAEKVEHAMKKMCTSAGHQLRFRCL 305
Query: 558 DLNYIMNSLKDDPVDMVLKVFRQNEKATINKIVDAFIKLQRYDILLAIGKSTVD 719
+ + + + VLK +N AT +IV ++ + +L A + +D
Sbjct: 306 QGQRSTSLVSEKCLKHVLKSCYKNSSATAMQIVTPYLSGKTTPVLSASSTNWLD 359
>Z50739-4|CAA90605.4| 1342|Caenorhabditis elegans Hypothetical
protein F13D2.1 protein.
Length = 1342
Score = 27.9 bits (59), Expect = 8.2
Identities = 25/114 (21%), Positives = 46/114 (40%)
Frame = +3
Query: 378 RLNYLSKKVDYLHTDLLYYRNIKSKMGAAWL*SLENHSEESGGFPNCWRDVGHLLGVTQD 557
RLNY++ + DY+ + L Y + A + +L N + GH L
Sbjct: 246 RLNYITLRNDYMIHEYLDYLIFGKQSQGAKILNLVNAEKVEHAMKKMCTSAGHQLRFRCL 305
Query: 558 DLNYIMNSLKDDPVDMVLKVFRQNEKATINKIVDAFIKLQRYDILLAIGKSTVD 719
+ + + + VLK +N AT +IV ++ + +L A + +D
Sbjct: 306 QGQRSTSLVSEKCLKHVLKSCYKNSSATAMQIVTPYLSGKTTPVLSASSTNWLD 359
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 273 NVKMEYLCEHLDETASVDTLQLEEFLREQRAAEINRLNYLSKKVDYLHTD 422
N K++ E + AS D L+LEE + ++AAE+ +K + L D
Sbjct: 13259 NDKLKLESEIATKKASADKLKLEEQAQAKKAAEVEAAKKQKEKDEQLKLD 13308
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 273 NVKMEYLCEHLDETASVDTLQLEEFLREQRAAEINRLNYLSKKVDYLHTD 422
N K++ E + AS D L+LEE + ++AAE+ +K + L D
Sbjct: 13259 NDKLKLESEIATKKASADKLKLEEQAQAKKAAEVEAAKKQKEKDEQLKLD 13308
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,407,970
Number of Sequences: 27780
Number of extensions: 352614
Number of successful extensions: 1083
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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