Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0789
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   137   8e-35
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   137   8e-35
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   122   4e-30
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    27   0.16 
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   4.5  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   7.9  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   7.9  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  137 bits (332), Expect = 8e-35
 Identities = 63/78 (80%), Positives = 71/78 (91%)
 Frame = +3

Query: 21  INEPTAAAIAYGLDKKGTGERNVLIFXLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 200
           INEPTAAAIAYGLDKK   ERNVLIF LGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60

Query: 201 FDNRMVNHFVQEFKRKYK 254
           FDNR+V +  Q+FK+K+K
Sbjct: 61  FDNRLVEYCTQDFKKKHK 78



 Score =  120 bits (289), Expect = 1e-29
 Identities = 55/84 (65%), Positives = 72/84 (85%)
 Frame = +2

Query: 257 DLATNKRALRRLRTACERAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFR 436
           D++ N RALRRLRT CERAKRTLSS+TQASI IDSLF+GID+ T+ITRARFE++N D F+
Sbjct: 80  DISGNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFK 139

Query: 437 STMEPVEKSLRDAKMDKAQIHDIV 508
             ++PV+K L+DAK+ K+ +H+IV
Sbjct: 140 KCIDPVDKVLQDAKIGKSAVHEIV 163



 Score = 54.0 bits (124), Expect = 1e-09
 Identities = 23/32 (71%), Positives = 29/32 (90%)
 Frame = +1

Query: 508 MVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 603
           +VGGSTRIPKVQ+L+ ++FNGKE  +SINPDE
Sbjct: 164 LVGGSTRIPKVQQLITEYFNGKEPCRSINPDE 195


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  137 bits (332), Expect = 8e-35
 Identities = 63/78 (80%), Positives = 71/78 (91%)
 Frame = +3

Query: 21  INEPTAAAIAYGLDKKGTGERNVLIFXLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 200
           INEPTAAAIAYGLDKK   ERNVLIF LGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60

Query: 201 FDNRMVNHFVQEFKRKYK 254
           FDNR+V +  Q+FK+K+K
Sbjct: 61  FDNRLVEYCTQDFKKKHK 78



 Score =  120 bits (289), Expect = 1e-29
 Identities = 55/84 (65%), Positives = 72/84 (85%)
 Frame = +2

Query: 257 DLATNKRALRRLRTACERAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEELNADLFR 436
           D++ N RALRRLRT CERAKRTLSS+TQASI IDSLF+GID+ T+ITRARFE++N D F+
Sbjct: 80  DISGNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFK 139

Query: 437 STMEPVEKSLRDAKMDKAQIHDIV 508
             ++PV+K L+DAK+ K+ +H+IV
Sbjct: 140 KCIDPVDKVLQDAKIGKSAVHEIV 163



 Score = 54.0 bits (124), Expect = 1e-09
 Identities = 23/32 (71%), Positives = 29/32 (90%)
 Frame = +1

Query: 508 MVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 603
           +VGGSTRIPKVQ+L+ ++FNGKE  +SINPDE
Sbjct: 164 LVGGSTRIPKVQQLITEYFNGKEPCRSINPDE 195


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  122 bits (293), Expect = 4e-30
 Identities = 53/79 (67%), Positives = 72/79 (91%)
 Frame = +3

Query: 21  INEPTAAAIAYGLDKKGTGERNVLIFXLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 200
           INEPTAAAIAYGLDKKG  E+N+L++ LGGGTFDVSILTI++G+FEV +T+GDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILTIDNGVFEVVATSGDTHLGGED 59

Query: 201 FDNRMVNHFVQEFKRKYKR 257
           FD +++++F++  K+K+K+
Sbjct: 60  FDQKVMDYFIKMVKQKHKK 78



 Score = 85.8 bits (203), Expect = 3e-19
 Identities = 42/91 (46%), Positives = 64/91 (70%)
 Frame = +2

Query: 236 VQEEIQKDLATNKRALRRLRTACERAKRTLSSSTQASIXIDSLFEGIDFYTSITRARFEE 415
           V+++ +KD+  +K+AL++LR   E+AKR LSS  + ++ I++L    DF  ++TRA+FEE
Sbjct: 72  VKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADYDFSETLTRAKFEE 131

Query: 416 LNADLFRSTMEPVEKSLRDAKMDKAQIHDIV 508
           LN D F  T++PV+K L DA M K QI +IV
Sbjct: 132 LNNDQFLKTLKPVKKVLEDADMTKDQIDEIV 162



 Score = 60.1 bits (139), Expect = 2e-11
 Identities = 24/32 (75%), Positives = 31/32 (96%)
 Frame = +1

Query: 508 MVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 603
           +VGGSTRIPK+Q+L++DFF+GKELN+ INPDE
Sbjct: 163 LVGGSTRIPKIQQLIKDFFDGKELNRGINPDE 194


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -1

Query: 497 GFEPY-PSWHHGETSPLAPW*T*TDRRSAPRSEHE 396
           GF P+ PS H G   P  PW T  D R   +  H+
Sbjct: 468 GFGPWKPSMHGGVCDPYTPWHTFYDYRPWVQHGHQ 502


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 547 LLQDFFNGKELNKSINPDE 603
           +  DF NGK L++S   D+
Sbjct: 15  IFSDFVNGKTLHRSTRDDK 33


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +1

Query: 163 NPPPATPTWEVRTLTIAWSTTLSRSSRGNTKGPRYQ 270
           NPP   P  +  +LT    +  S+   G+T G   Q
Sbjct: 58  NPPNLNPAVQGSSLTEGKRSKRSKRPNGDTNGDTSQ 93


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/61 (18%), Positives = 24/61 (39%)
 Frame = -1

Query: 227 KVVDHAIVKVLTSQVGVAGGGFHLEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKTVS 48
           K++   I KVL  +   +G  +           G + G   +++D Y +    +  K + 
Sbjct: 210 KLLTSKIYKVLEEKYKTSGSLYTCWSEFTQKTQGQIYGIKVDIRDAYGNVKIPVLCKLIQ 269

Query: 47  N 45
           +
Sbjct: 270 S 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,436
Number of Sequences: 336
Number of extensions: 3881
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)