Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0788
(813 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.0
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 28 1.4
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 28 1.8
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 28 1.8
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 2.4
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 3.2
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 27 4.2
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 27 4.2
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 4.2
SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces po... 27 4.2
SPBC365.15 |alp4||gamma tubulin complex Spc97/GCP2 subunit Alp4|... 27 4.2
SPBP4H10.21c |sld5||GINS complex subunit Sld5|Schizosaccharomyce... 26 5.5
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 5.5
SPCP20C8.02c |||S. pombe specific UPF0321 family protein 1|Schiz... 26 5.5
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 26 5.5
SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces... 26 7.3
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 26 7.3
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 25 9.7
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 363 PNLTVALKLPTGTESQNLTCEKNDNSENTAPTSTIYGIDTNFNARQNS 506
P + L P G S N N+N+ + A T+ Y +T NA N+
Sbjct: 42 PVENLKLAPPPGATSVNTAVYNNNNNTSAANTNAAYNANTAANANANT 89
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 28.3 bits (60), Expect = 1.4
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +3
Query: 180 PNKKSHHMLVPL*AKVLSTIEESSSLFEWSVPTLKLRMVLMNYMEPSTSKVCFY-SELDK 356
P+ +SH P KVL + E S+P LK + + +TS VC Y ++
Sbjct: 325 PSIRSHVFKPPFNLKVLQLLHEHGLA---SIPELKHELYMAYIERKTTSLVCLYLLGVES 381
Query: 357 KDPNLTVALKLP 392
P L + LP
Sbjct: 382 LAPALRIPTALP 393
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 27.9 bits (59), Expect = 1.8
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 483 NFNARQNSIWNKKIWKKMISSKHLESVNY 569
NF+AR N+ WN IW + +++Y
Sbjct: 618 NFDARNNTAWNGDIWILYTNQNRTTTLDY 646
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 27.9 bits (59), Expect = 1.8
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = -1
Query: 405 IRFRLEVLKQPSN*DPFYPIQNKSTLWMWKVPYNSSIPYATSMLGPTIRRATNFLQWLKA 226
++FR+ P++ D + + + S +W KV Y +SIP +G I LK
Sbjct: 158 LQFRVIRTIPPNSLDLMHSV-SVSDIWPLKVNYETSIPSKVYAIGSEIPVNITLYPLLKG 216
Query: 225 LWL----KVGRAYGVIFCWEPAWTPSCR 154
L + V + Y +F A++ +CR
Sbjct: 217 LDVGKVTLVLKEYCTLFITSKAYSSTCR 244
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 611 KMQIRRLQKKTSRYQKKIANLKDILKNLNEK 703
K +I +KKT Q KI L++ ++NLN++
Sbjct: 1675 KAKISVYEKKTRDLQNKITQLEETIENLNKQ 1705
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.1 bits (57), Expect = 3.2
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 509 LEQENLEKNDLIETPRKRKLRQLILVQDSFIKTQKM--QIRRLQKKTSRYQKKIANLKDI 682
LEQE+ + N +++ K ++ I+ K+ +++ + K+S KK+ ++
Sbjct: 897 LEQESAQLNSGLKSLEAEKQLLHTENEELHIRLDKLTGKLKIEESKSSDLGKKLTARQEE 956
Query: 683 LKNLNEKNFISADHVTH*KTLE*PTLS 763
+ NL E+N + +T K+ TLS
Sbjct: 957 ISNLKEENMSQSQAITSVKSKLDETLS 983
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 405 SQNLTCEKNDNSENTAPTSTIYGIDTNFNARQ 500
+ N C DN E APT ++ NA+Q
Sbjct: 213 TDNFVCWLFDNMEKDAPTESVSNFTDGINAKQ 244
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/67 (22%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 509 LEQENLEKNDLIETPRKRKLRQLILVQDSFIKTQ--KMQIRRLQKKTSRYQKKIANLKDI 682
+E+E+ K+DL E ++L++ I ++ + ++ ++ + ++Y+K + NL++
Sbjct: 515 VEEESSMKDDLTEM--NQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQ 572
Query: 683 LKNLNEK 703
LK K
Sbjct: 573 LKTARMK 579
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.6 bits (56), Expect = 4.2
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 10/79 (12%)
Frame = +2
Query: 515 QENLEKNDLIETPRKRKLRQLILVQDSF----------IKTQKMQIRRLQKKTSRYQKKI 664
+ENLE+N+ + T + K+ L +F ++T+K +++L+ Y++
Sbjct: 1243 RENLERNEEVITELREKIETLKTDLANFRLNKEQLESQLQTEKAAVKKLENSNEEYKR-- 1300
Query: 665 ANLKDILKNLNEKNFISAD 721
+ ++IL +LN S+D
Sbjct: 1301 -HNQEILLSLNSSTSTSSD 1318
>SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1014
Score = 26.6 bits (56), Expect = 4.2
Identities = 9/37 (24%), Positives = 17/37 (45%)
Frame = -1
Query: 330 LWMWKVPYNSSIPYATSMLGPTIRRATNFLQWLKALW 220
LW+ + S + +++S RAT W+ +W
Sbjct: 308 LWLQYTAWLSKVDFSSSQASSVAERATRNCSWIGRIW 344
>SPBC365.15 |alp4||gamma tubulin complex Spc97/GCP2 subunit
Alp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 26.6 bits (56), Expect = 4.2
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +2
Query: 521 NLEKNDLIETPRKRKLRQLILV-QDSFIKTQKMQIRRLQKKTSRYQKKIANLKDILKNLN 697
+L+ L P R LRQ+ L+ +D + +K +S ++N+ D+L+ LN
Sbjct: 182 SLQTLRLYTLPTSRSLRQVYLILRDLLLSMEK-------NASSSDDLGLSNIDDLLEQLN 234
Query: 698 EKNFIS 715
E N IS
Sbjct: 235 EGNDIS 240
>SPBP4H10.21c |sld5||GINS complex subunit Sld5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 214
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 282 KLRMVLMNYMEPSTSKVCFYSELDKKDPNLTVALKLP 392
+++ VL +YM +K+ Y++ + PNL + L P
Sbjct: 81 RVKFVLRSYMRTRINKIDKYAQYIQSHPNLLLYLSSP 117
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.2 bits (55), Expect = 5.5
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 557 KRKLRQLILVQDSFIK-TQKMQIRRLQKKTSRYQKKIANLKDILKNLNE--KNF 709
K K Q++ ++ I T MQ+ LQ++ + ++I L D + +NE KNF
Sbjct: 370 KEKENQIMHESEASIGLTDSMQVHTLQEQLHKANEEIEFLHDQISRMNEEGKNF 423
>SPCP20C8.02c |||S. pombe specific UPF0321 family protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 111
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 627 LLICIFCVFMKLSCTKIN 574
LL CI CVF+KL ++N
Sbjct: 3 LLFCICCVFIKLVLAEVN 20
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 26.2 bits (55), Expect = 5.5
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 318 STSKVCFYSELDKKDPNLTVALKLPTGTESQ-NLTCEKNDNSENTAPTSTIYGIDTNFN 491
S+S CF E D DP+L++ T S N T ++ D S+ + TST+ + + N
Sbjct: 244 SSSLKCFDPEYDYNDPSLSIRRDSSTYYFSNVNETYDEED-SDLDSETSTVNWVQSVLN 301
>SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1155
Score = 25.8 bits (54), Expect = 7.3
Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = +3
Query: 252 SLFEWSVPTLKLRMVLMNYMEPSTSKVCFYSELDKKDPNL--TVALKLPTGTESQNLTCE 425
S++ W+ + + E S + V F+S ++ D + L TG S TC+
Sbjct: 248 SIYAWAPYLIDFNRIRFYNYESSENSVAFFSAINPADGTVLPLTHYDLETGLSS---TCD 304
Query: 426 KNDNSENTAPTSTIYGIDTNFNARQNSI 509
N + +N A Y +N+ Q I
Sbjct: 305 VNCSLQNFANYQDFY-FSKGYNSYQIEI 331
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 25.8 bits (54), Expect = 7.3
Identities = 16/65 (24%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Frame = -1
Query: 342 NKSTLWMWKVPYNSSIPYATSMLGPTIRRATNFLQWLKALWLKVGRAYGVIFCWEPA-WT 166
N ++WMW +P + P A F+ L G + W PA
Sbjct: 166 NDGSIWMWSLPSGKVVQVMYGHTAPV--NAGKFIPPGVGKRLATVDDSGTLIVWNPATGA 223
Query: 165 PSCRI 151
P CR+
Sbjct: 224 PECRM 228
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 315 VPYNSSIPYATSMLGPTIRRAT 250
V YN+ IP T+ LG T+R T
Sbjct: 369 VTYNAKIPMTTAALGGTLRVPT 390
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,497,268
Number of Sequences: 5004
Number of extensions: 75952
Number of successful extensions: 245
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 396433620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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