BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0788 (813 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_01_0420 - 3230936-3231710,3232265-3233885,3234411-3234834 31 1.4 03_02_0565 - 9484045-9484335,9484621-9484686,9484790-9484867,948... 29 3.3 05_07_0364 - 29611149-29611211,29611441-29611623,29611796-296118... 29 5.8 11_06_0068 - 19759141-19761180 28 7.7 10_08_0853 - 21076085-21076138,21076188-21076333,21076540-210766... 28 7.7 06_01_0293 - 2139421-2139600,2139716-2140471,2140830-2140935,214... 28 7.7 >11_01_0420 - 3230936-3231710,3232265-3233885,3234411-3234834 Length = 939 Score = 30.7 bits (66), Expect = 1.4 Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 8/95 (8%) Frame = +3 Query: 189 KSHHMLVPL*AKVLSTIEESSSL---FEWSVPTLKLRMVLMNYM---EPSTSKVCFYSEL 350 K HH LV L I+ESSS F ++P + R L+++ PS + + Sbjct: 703 KHHHQLVDLLISEKQWIKESSSQTSPFRLALPQRRARSPLLSFFTNGRPSGQR----KHV 758 Query: 351 DKKDPNL--TVALKLPTGTESQNLTCEKNDNSENT 449 D + P L T LPT +C+ N+N + Sbjct: 759 DDRSPTLSRTSVHVLPTKNGKGQASCKSNENQSKS 793 >03_02_0565 - 9484045-9484335,9484621-9484686,9484790-9484867, 9485005-9485157,9485271-9485356,9485445-9485551, 9485685-9485752,9485890-9485912,9487627-9487732, 9487772-9487899,9487989-9488065,9488126-9488131, 9488206-9488264 Length = 415 Score = 29.5 bits (63), Expect = 3.3 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +2 Query: 545 ETPRKRKLRQLILVQDSFIKTQKMQIRRLQKKTSRYQKKIANL 673 E RKR R LIL+ D+F+ Q ++K S Y +AN+ Sbjct: 43 ELERKR-YRTLILMADTFLANDLRQFPSAKRKASLYTSTLANI 84 >05_07_0364 - 29611149-29611211,29611441-29611623,29611796-29611853, 29612150-29612207,29612504-29612561,29612859-29612916, 29613214-29613271,29613568-29613625,29613923-29613980, 29614277-29614334,29614631-29614688,29614983-29615040, 29615337-29615394,29615691-29615748,29616045-29616102, 29616400-29616457,29616755-29616812,29617109-29617166, 29617463-29617520,29617817-29617874,29618171-29618228, 29618525-29618582,29618878-29618935,29619233-29619290, 29619942-29619999,29620297-29620376,29620649-29620706, 29621001-29621058,29621353-29621410,29621707-29621764, 29622415-29622472,29622767-29622824,29623121-29623164, 29623475-29623532,29623829-29623886,29624537-29624594, 29624889-29624946,29625243-29625300,29625597-29625654, 29626305-29626400,29626697-29626792,29627797-29627892, 29628188-29628283,29629996-29630053,29630350-29630407, 29630704-29630799,29631096-29631191,29632196-29632253, 29632549-29632644,29633648-29633743,29634040-29634042 Length = 1114 Score = 28.7 bits (61), Expect = 5.8 Identities = 17/51 (33%), Positives = 22/51 (43%) Frame = +1 Query: 58 CKNNSCIVNYKKDSISFHTYPKDPKIKEMWINATGRGPSWFPTKNHTICSS 210 C+NN C V Y D F PK P ++ + GPS P T +S Sbjct: 811 CRNNRCFVAYVVDPQIFDVSPKQPLLRGLCC-----GPSDIPRFAETTAAS 856 >11_06_0068 - 19759141-19761180 Length = 679 Score = 28.3 bits (60), Expect = 7.7 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = -3 Query: 367 LGSFLSNSE*KHTLDVEGSI*FINTIRNFNVGTDHSKSDELS 242 + FL + +HT +V+GSI +++ I F GT SK+D S Sbjct: 184 ISRFLYGGKTRHTKNVKGSIDYMDPIL-FRDGTQSSKNDVYS 224 >10_08_0853 - 21076085-21076138,21076188-21076333,21076540-21076645, 21076739-21076816,21076923-21076979,21077070-21077130, 21077360-21077412,21077613-21077699,21077820-21077899, 21079469-21079681,21079824-21080064 Length = 391 Score = 28.3 bits (60), Expect = 7.7 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Frame = -1 Query: 663 IFF**RLVFF*SLLICIFCVFMKLSCTKIN-WR 568 +FF L FF +C F VF +L CT N WR Sbjct: 48 LFFFFLLFFFFFFSVCDFLVFDRLHCTAANRWR 80 >06_01_0293 - 2139421-2139600,2139716-2140471,2140830-2140935, 2140999-2141249,2141342-2141443,2141557-2141876, 2142350-2142546,2143668-2143786,2143876-2143997, 2144877-2145081 Length = 785 Score = 28.3 bits (60), Expect = 7.7 Identities = 15/65 (23%), Positives = 38/65 (58%) Frame = +2 Query: 512 EQENLEKNDLIETPRKRKLRQLILVQDSFIKTQKMQIRRLQKKTSRYQKKIANLKDILKN 691 ++E+L+ N + + + I ++++ + +K +RRL +K R ++++A +D L+N Sbjct: 346 QKESLDANQKLHKLGIQDIEDEIKLKETELTEEK--VRRLIRKKEREEQEVARREDQLRN 403 Query: 692 LNEKN 706 N ++ Sbjct: 404 ENAES 408 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,571,841 Number of Sequences: 37544 Number of extensions: 414785 Number of successful extensions: 1043 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 992 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1042 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2221181676 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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