Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0788
         (813 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   7.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   7.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   7.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   7.8  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -2

Query: 296 YHTQLQCWDRPFEERRTFFN 237
           Y   L CW +    R TF N
Sbjct: 868 YQLMLDCWQKERTHRPTFAN 887


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 748 LQCFLMRNVISTNEVFFIKV 689
           L CF   N +  +E+F+ K+
Sbjct: 562 LDCFFTMNDLEPSEIFYEKI 581


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 748 LQCFLMRNVISTNEVFFIKV 689
           L CF   N +  +E+F+ K+
Sbjct: 562 LDCFFTMNDLEPSEIFYEKI 581


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -1

Query: 348 IQNKSTLWMWKVPYNSSIPYATSMLGPTIR 259
           + + + L ++ +PY   IP  T++ G T+R
Sbjct: 508 VTHAARLNVYGLPYIRLIPKVTAVAGETLR 537


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -1

Query: 348 IQNKSTLWMWKVPYNSSIPYATSMLGPTIR 259
           + + + L ++ +PY   IP  T++ G T+R
Sbjct: 508 VTHAARLNVYGLPYIRLIPKVTAVAGETLR 537


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,840
Number of Sequences: 438
Number of extensions: 5344
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)