BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0787 (794 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 3e-47 SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 3e-47 SB_56| Best HMM Match : Actin (HMM E-Value=0) 185 3e-47 SB_56628| Best HMM Match : Actin (HMM E-Value=0) 185 3e-47 SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 3e-47 SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24 SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 107 1e-23 SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 97 1e-20 SB_54| Best HMM Match : Actin (HMM E-Value=0) 94 1e-19 SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 3e-19 SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09 SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 3e-08 SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 55 6e-08 SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 50 2e-06 SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 49 5e-06 SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04 SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.066 SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 34 0.12 SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81 SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.81 SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9 SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6 SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6 >SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 376 Score = 185 bits (451), Expect = 3e-47 Identities = 83/83 (100%), Positives = 83/83 (100%) Frame = +3 Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL Sbjct: 47 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106 Query: 435 TEAPLNPKANREKMTQIMFETFN 503 TEAPLNPKANREKMTQIMFETFN Sbjct: 107 TEAPLNPKANREKMTQIMFETFN 129 Score = 109 bits (263), Expect = 2e-24 Identities = 51/55 (92%), Positives = 54/55 (98%) Frame = +2 Query: 509 AMYVAXQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 673 AMYVA QAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDL Sbjct: 132 AMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDL 186 Score = 95.1 bits (226), Expect = 6e-20 Identities = 43/46 (93%), Positives = 45/46 (97%) Frame = +1 Query: 118 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255 M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46 Score = 39.1 bits (87), Expect = 0.004 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +1 Query: 733 EREIVRDIQGKLCYVALEFE 792 EREIVRDI+ KLCYVAL+FE Sbjct: 206 EREIVRDIKEKLCYVALDFE 225 Score = 29.1 bits (62), Expect = 4.3 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +3 Query: 675 TDYLMKILXERGY 713 TDYLMKIL ERGY Sbjct: 187 TDYLMKILTERGY 199 >SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 375 Score = 185 bits (451), Expect = 3e-47 Identities = 83/83 (100%), Positives = 83/83 (100%) Frame = +3 Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL Sbjct: 46 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 105 Query: 435 TEAPLNPKANREKMTQIMFETFN 503 TEAPLNPKANREKMTQIMFETFN Sbjct: 106 TEAPLNPKANREKMTQIMFETFN 128 Score = 110 bits (265), Expect = 1e-24 Identities = 52/55 (94%), Positives = 54/55 (98%) Frame = +2 Query: 509 AMYVAXQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 673 AMYVA QAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDL Sbjct: 131 AMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 185 Score = 92.3 bits (219), Expect = 4e-19 Identities = 41/44 (93%), Positives = 44/44 (100%) Frame = +1 Query: 124 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255 +++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 45 Score = 35.5 bits (78), Expect = 0.050 Identities = 16/20 (80%), Positives = 18/20 (90%) Frame = +1 Query: 733 EREIVRDIQGKLCYVALEFE 792 EREIVRDI+ KL YVAL+FE Sbjct: 205 EREIVRDIKEKLAYVALDFE 224 Score = 29.1 bits (62), Expect = 4.3 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +3 Query: 675 TDYLMKILXERGY 713 TDYLMKIL ERGY Sbjct: 186 TDYLMKILTERGY 198 >SB_56| Best HMM Match : Actin (HMM E-Value=0) Length = 375 Score = 185 bits (451), Expect = 3e-47 Identities = 83/83 (100%), Positives = 83/83 (100%) Frame = +3 Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL Sbjct: 46 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 105 Query: 435 TEAPLNPKANREKMTQIMFETFN 503 TEAPLNPKANREKMTQIMFETFN Sbjct: 106 TEAPLNPKANREKMTQIMFETFN 128 Score = 110 bits (265), Expect = 1e-24 Identities = 52/55 (94%), Positives = 54/55 (98%) Frame = +2 Query: 509 AMYVAXQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 673 AMYVA QAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDL Sbjct: 131 AMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 185 Score = 93.5 bits (222), Expect = 2e-19 Identities = 42/44 (95%), Positives = 44/44 (100%) Frame = +1 Query: 124 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255 ++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 45 Score = 39.1 bits (87), Expect = 0.004 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +1 Query: 733 EREIVRDIQGKLCYVALEFE 792 EREIVRDI+ KLCYVAL+FE Sbjct: 205 EREIVRDIKEKLCYVALDFE 224 Score = 29.1 bits (62), Expect = 4.3 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +3 Query: 675 TDYLMKILXERGY 713 TDYLMKIL ERGY Sbjct: 186 TDYLMKILTERGY 198 >SB_56628| Best HMM Match : Actin (HMM E-Value=0) Length = 376 Score = 185 bits (451), Expect = 3e-47 Identities = 83/83 (100%), Positives = 83/83 (100%) Frame = +3 Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL Sbjct: 47 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106 Query: 435 TEAPLNPKANREKMTQIMFETFN 503 TEAPLNPKANREKMTQIMFETFN Sbjct: 107 TEAPLNPKANREKMTQIMFETFN 129 Score = 110 bits (265), Expect = 1e-24 Identities = 52/55 (94%), Positives = 54/55 (98%) Frame = +2 Query: 509 AMYVAXQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 673 AMYVA QAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDL Sbjct: 132 AMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDL 186 Score = 99.5 bits (237), Expect = 3e-21 Identities = 44/46 (95%), Positives = 46/46 (100%) Frame = +1 Query: 118 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255 MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46 Score = 39.1 bits (87), Expect = 0.004 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +1 Query: 733 EREIVRDIQGKLCYVALEFE 792 EREIVRDI+ KLCYVAL+FE Sbjct: 206 EREIVRDIKEKLCYVALDFE 225 Score = 29.1 bits (62), Expect = 4.3 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +3 Query: 675 TDYLMKILXERGY 713 TDYLMKIL ERGY Sbjct: 187 TDYLMKILTERGY 199 >SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 349 Score = 185 bits (451), Expect = 3e-47 Identities = 83/83 (100%), Positives = 83/83 (100%) Frame = +3 Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL Sbjct: 47 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106 Query: 435 TEAPLNPKANREKMTQIMFETFN 503 TEAPLNPKANREKMTQIMFETFN Sbjct: 107 TEAPLNPKANREKMTQIMFETFN 129 Score = 95.1 bits (226), Expect = 6e-20 Identities = 41/46 (89%), Positives = 45/46 (97%) Frame = +1 Query: 118 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255 M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46 Score = 75.4 bits (177), Expect = 5e-14 Identities = 37/42 (88%), Positives = 39/42 (92%), Gaps = 2/42 (4%) Frame = +2 Query: 509 AMYVAXQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 628 AMYVA QAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+ Sbjct: 132 AMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173 Score = 39.1 bits (87), Expect = 0.004 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +1 Query: 733 EREIVRDIQGKLCYVALEFE 792 EREIVRDI+ KLCYVAL+FE Sbjct: 179 EREIVRDIKEKLCYVALDFE 198 >SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 338 Score = 109 bits (263), Expect = 2e-24 Identities = 51/55 (92%), Positives = 54/55 (98%) Frame = +2 Query: 509 AMYVAXQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 673 AMYVA QAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDL Sbjct: 94 AMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDL 148 Score = 93.9 bits (223), Expect = 1e-19 Identities = 42/45 (93%), Positives = 42/45 (93%) Frame = +3 Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 389 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF Sbjct: 46 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90 Score = 93.5 bits (222), Expect = 2e-19 Identities = 41/44 (93%), Positives = 44/44 (100%) Frame = +1 Query: 124 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255 D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 45 Score = 39.1 bits (87), Expect = 0.004 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +1 Query: 733 EREIVRDIQGKLCYVALEFE 792 EREIVRDI+ KLCYVAL+FE Sbjct: 168 EREIVRDIKEKLCYVALDFE 187 Score = 29.1 bits (62), Expect = 4.3 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +3 Query: 675 TDYLMKILXERGY 713 TDYLMKIL ERGY Sbjct: 149 TDYLMKILTERGY 161 >SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) Length = 152 Score = 107 bits (256), Expect = 1e-23 Identities = 50/55 (90%), Positives = 52/55 (94%) Frame = +2 Query: 509 AMYVAXQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 673 A+YVA QAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDL Sbjct: 10 AVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDL 64 Score = 37.1 bits (82), Expect = 0.016 Identities = 16/19 (84%), Positives = 18/19 (94%) Frame = +1 Query: 733 EREIVRDIQGKLCYVALEF 789 EREIVRDI+ KLCYVAL+F Sbjct: 84 EREIVRDIKEKLCYVALDF 102 >SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) Length = 367 Score = 97.1 bits (231), Expect = 1e-20 Identities = 40/57 (70%), Positives = 54/57 (94%) Frame = +2 Query: 509 AMYVAXQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLHR 679 A++++ QAVLSLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD+ R Sbjct: 157 ALFISMQAVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSR 213 Score = 52.8 bits (121), Expect = 3e-07 Identities = 21/29 (72%), Positives = 25/29 (86%) Frame = +3 Query: 417 EHPVLLTEAPLNPKANREKMTQIMFETFN 503 +HPVLLTEAPLNP+ NREK ++ FETFN Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFN 154 >SB_54| Best HMM Match : Actin (HMM E-Value=0) Length = 2486 Score = 93.9 bits (223), Expect = 1e-19 Identities = 42/54 (77%), Positives = 47/54 (87%) Frame = +2 Query: 512 MYVAXQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 673 MYVA QAV++LYASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDL Sbjct: 2177 MYVAVQAVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDL 2230 Score = 68.1 bits (159), Expect = 8e-12 Identities = 30/45 (66%), Positives = 37/45 (82%) Frame = +3 Query: 369 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 503 K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFN 2173 Score = 59.7 bits (138), Expect = 3e-09 Identities = 23/34 (67%), Positives = 30/34 (88%) Frame = +1 Query: 142 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 243 +V+DNGSG CKAG + D++PR VFP+IVGRPRH+ Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130 Score = 28.7 bits (61), Expect = 5.7 Identities = 9/20 (45%), Positives = 17/20 (85%) Frame = +1 Query: 733 EREIVRDIQGKLCYVALEFE 792 E++I+RD++ LCY A+++E Sbjct: 2250 EQQIIRDLKETLCYCAMDYE 2269 >SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 411 Score = 92.7 bits (220), Expect = 3e-19 Identities = 42/88 (47%), Positives = 59/88 (67%), Gaps = 1/88 (1%) Frame = +3 Query: 240 SGRDGGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 416 S + G + KD VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103 Query: 417 EHPVLLTEAPLNPKANREKMTQIMFETF 500 VLLTE PLNP NREKM ++MFE + Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENY 131 Score = 87.4 bits (207), Expect = 1e-17 Identities = 37/60 (61%), Positives = 47/60 (78%) Frame = +2 Query: 494 NIQHAAMYVAXQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 673 N Q +Y+A QAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+ Sbjct: 130 NYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDI 189 Score = 44.4 bits (100), Expect = 1e-04 Identities = 17/33 (51%), Positives = 24/33 (72%) Frame = +1 Query: 136 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 234 + +V DNG+G K G+AG + P +FPS+VGRP Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39 >SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) Length = 1392 Score = 59.7 bits (138), Expect = 3e-09 Identities = 27/39 (69%), Positives = 29/39 (74%) Frame = +1 Query: 127 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 243 E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392 >SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) Length = 372 Score = 56.4 bits (130), Expect = 3e-08 Identities = 26/60 (43%), Positives = 34/60 (56%) Frame = +3 Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434 G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336 Score = 32.3 bits (70), Expect = 0.47 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = +2 Query: 563 TGIVLDSGDGVSHTVPI 613 TG V+DSGDGV+H +P+ Sbjct: 356 TGCVIDSGDGVTHVIPV 372 >SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) Length = 240 Score = 55.2 bits (127), Expect = 6e-08 Identities = 22/59 (37%), Positives = 38/59 (64%) Frame = +3 Query: 327 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 503 PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYN 61 Score = 52.0 bits (119), Expect = 5e-07 Identities = 22/52 (42%), Positives = 36/52 (69%) Frame = +2 Query: 509 AMYVAXQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 664 A ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG Sbjct: 64 AFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAG 115 >SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) Length = 543 Score = 50.0 bits (114), Expect = 2e-06 Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 8/59 (13%) Frame = +2 Query: 521 AXQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 673 A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGRD+ Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDI 98 >SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) Length = 921 Score = 48.8 bits (111), Expect = 5e-06 Identities = 20/48 (41%), Positives = 31/48 (64%) Frame = +1 Query: 112 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255 FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++ Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLI 740 Score = 46.4 bits (105), Expect = 3e-05 Identities = 22/49 (44%), Positives = 28/49 (57%) Frame = +2 Query: 527 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 673 Q LSLYASG T G+ L SG + IYEG+ L H + L++ G L Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHL 815 >SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 198 Score = 41.9 bits (94), Expect = 6e-04 Identities = 21/39 (53%), Positives = 27/39 (69%) Frame = -3 Query: 240 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 124 MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39 >SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 220 Score = 35.1 bits (77), Expect = 0.066 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 7/84 (8%) Frame = +3 Query: 240 SGRDGGM-GQKDS---YVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELR 404 SG+ GG G+ DS VG++ S I L+ P + +VT+++ E++ H F + Sbjct: 100 SGKIGGRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGI 159 Query: 405 VAP--EEHPVLLTEAPLNPKANRE 470 P HPV++TE NP R+ Sbjct: 160 NTPGGVNHPVIMTEPVCNPNYCRQ 183 >SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) Length = 580 Score = 34.3 bits (75), Expect = 0.12 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +3 Query: 276 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 398 ++GD+ + + L Y P + G + NWD ++IW +TF E Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315 >SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 120 Score = 31.5 bits (68), Expect = 0.81 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -1 Query: 215 GNTARGASSPAKPALHIPEPLSTT 144 GNT R PAKPAL++P P S T Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103 >SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) Length = 170 Score = 31.5 bits (68), Expect = 0.81 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -1 Query: 215 GNTARGASSPAKPALHIPEPLSTT 144 GNT R PAKPAL++P P S T Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103 >SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 749 Score = 30.3 bits (65), Expect = 1.9 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -1 Query: 215 GNTARGASSPAKPALHIPEPLSTT 144 GNT R PAKP+L++P P S T Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563 >SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 130 Score = 28.3 bits (60), Expect = 7.6 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -1 Query: 215 GNTARGASSPAKPALHIPEPLSTT 144 GNT R AKPAL++P P S T Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63 >SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 635 Score = 28.3 bits (60), Expect = 7.6 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -1 Query: 215 GNTARGASSPAKPALHIPEPLSTT 144 GNT R PAKP L IP P + T Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,969,073 Number of Sequences: 59808 Number of extensions: 561511 Number of successful extensions: 1904 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 1609 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1894 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2191792647 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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