Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0786
         (764 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   6.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   6.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   6.2  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   8.2  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   8.2  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 378 IPPSRVPSRNSGIN 337
           +PP+ +P +N G+N
Sbjct: 184 VPPAGIPLQNPGLN 197


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 285 LTNYCFLGDYAIFRIRT 235
           +T+Y  L  Y++FRI T
Sbjct: 62  ITSYTLLSVYSLFRIAT 78


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 285 LTNYCFLGDYAIFRIRT 235
           +T+Y  L  Y++FRI T
Sbjct: 62  ITSYTLLSVYSLFRIAT 78


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 120 AFRNIERHLDLLAQ 161
           +F+NIE HL+ ++Q
Sbjct: 41  SFKNIESHLNAISQ 54


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 691 PEARQSSYVGNKKQKCRSKR 632
           PE+R   +  N++ KCR ++
Sbjct: 109 PESRVQVWFKNRRAKCRQQQ 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,812
Number of Sequences: 336
Number of extensions: 3413
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)