BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0786 (764 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_04_0615 + 26633438-26633570,26633711-26633840,26634203-26634836 31 1.3 07_03_0591 + 19792694-19792738,19794190-19794509,19795104-197951... 29 5.4 01_01_0875 + 6856440-6857195,6858670-6858918,6859025-6859147,685... 28 7.1 >04_04_0615 + 26633438-26633570,26633711-26633840,26634203-26634836 Length = 298 Score = 30.7 bits (66), Expect = 1.3 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +1 Query: 37 RKVKAAQFGLSKTLSRLGSGAAKCKSARH 123 R+ +AA G L+ LG GAA C +ARH Sbjct: 117 RQGQAAAVGEQAALASLGGGAASCPAARH 145 >07_03_0591 + 19792694-19792738,19794190-19794509,19795104-19795161, 19798000-19798056,19798373-19798440,19798454-19798543, 19798619-19798820,19798902-19798988,19799642-19799719, 19799815-19800040,19800260-19800483,19801988-19802014, 19802470-19802518,19802594-19802688,19802778-19802864, 19802973-19803100,19803198-19803294,19803563-19803788, 19803888-19804294 Length = 856 Score = 28.7 bits (61), Expect = 5.4 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +2 Query: 683 RFWRAFGPIYVXAKTLSQTCLQPV 754 R WR +GPIY+ +TL +QPV Sbjct: 342 RTWRKYGPIYIEGETLG--VIQPV 363 Score = 27.9 bits (59), Expect = 9.4 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +2 Query: 689 WRAFGPIYVXAKTLSQTCLQPVYW 760 W+ +GPIYV KT+ +QPV + Sbjct: 655 WKKYGPIYVRGKTMG--VIQPVLY 676 >01_01_0875 + 6856440-6857195,6858670-6858918,6859025-6859147, 6859288-6859479 Length = 439 Score = 28.3 bits (60), Expect = 7.1 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +1 Query: 13 GEPWWMYSRKVKAAQFG 63 GE WW+Y+R+V AA G Sbjct: 146 GESWWVYTREVVAAAAG 162 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,129,978 Number of Sequences: 37544 Number of extensions: 330163 Number of successful extensions: 634 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 621 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 634 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 2051430072 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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