Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0786
         (764 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0615 + 26633438-26633570,26633711-26633840,26634203-26634836     31   1.3  
07_03_0591 + 19792694-19792738,19794190-19794509,19795104-197951...    29   5.4  
01_01_0875 + 6856440-6857195,6858670-6858918,6859025-6859147,685...    28   7.1  

>04_04_0615 + 26633438-26633570,26633711-26633840,26634203-26634836
          Length = 298

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 37  RKVKAAQFGLSKTLSRLGSGAAKCKSARH 123
           R+ +AA  G    L+ LG GAA C +ARH
Sbjct: 117 RQGQAAAVGEQAALASLGGGAASCPAARH 145


>07_03_0591 +
           19792694-19792738,19794190-19794509,19795104-19795161,
           19798000-19798056,19798373-19798440,19798454-19798543,
           19798619-19798820,19798902-19798988,19799642-19799719,
           19799815-19800040,19800260-19800483,19801988-19802014,
           19802470-19802518,19802594-19802688,19802778-19802864,
           19802973-19803100,19803198-19803294,19803563-19803788,
           19803888-19804294
          Length = 856

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 683 RFWRAFGPIYVXAKTLSQTCLQPV 754
           R WR +GPIY+  +TL    +QPV
Sbjct: 342 RTWRKYGPIYIEGETLG--VIQPV 363



 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 689 WRAFGPIYVXAKTLSQTCLQPVYW 760
           W+ +GPIYV  KT+    +QPV +
Sbjct: 655 WKKYGPIYVRGKTMG--VIQPVLY 676


>01_01_0875 +
           6856440-6857195,6858670-6858918,6859025-6859147,
           6859288-6859479
          Length = 439

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 13  GEPWWMYSRKVKAAQFG 63
           GE WW+Y+R+V AA  G
Sbjct: 146 GESWWVYTREVVAAAAG 162


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,129,978
Number of Sequences: 37544
Number of extensions: 330163
Number of successful extensions: 634
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)