Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0786
         (764 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_31412| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.3  
SB_54232| Best HMM Match : Pkinase (HMM E-Value=1.1e-39)               29   3.1  

>SB_31412| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 909

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 199 FCSANAHPFHKWRPDSENSIISQETVICK 285
           FC  NA    KWRP +E S+ S  +  CK
Sbjct: 816 FCLNNATQNTKWRPITERSVFSAMSTACK 844


>SB_54232| Best HMM Match : Pkinase (HMM E-Value=1.1e-39)
          Length = 1123

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 24  VDVLAKGQSGSVWIVENAQPAREWRG*V*IGKAFRNIERHLDL 152
           +D++ KG  GS W+VE+ Q  R +        A  + +RHL L
Sbjct: 7   IDIIGKGTFGSAWLVESRQSKRLYALKELNATAMPSEDRHLAL 49


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,546,506
Number of Sequences: 59808
Number of extensions: 412073
Number of successful extensions: 698
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2072022557
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)