Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0783
         (830 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   3.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   3.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   3.9  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    22   5.2  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   5.2  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   5.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   6.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   6.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.1  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.1  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -1

Query: 632 EFKYNNVLKGYVFCSGHPHTYRPEQHSNY 546
           ++ Y N  + Y +   HP++     H NY
Sbjct: 349 QYNYPNPQQQYYYNKNHPNSENYINHQNY 377


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -1

Query: 632 EFKYNNVLKGYVFCSGHPHTYRPEQHSNY 546
           ++ Y N  + Y +   HP++     H NY
Sbjct: 297 QYNYPNPQQQYYYNKNHPNSENYINHQNY 325


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 602 YVFCSGHPH 576
           Y FCS HPH
Sbjct: 345 YFFCSPHPH 353


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 464 NKVTILLHVYVDVLRFARVTTQLFLLLRNCYV 559
           N+V ++L V VD +      T L  +   CY+
Sbjct: 36  NRVVLILKVLVDQVMILETMTPLDFMDFRCYL 67


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 464 NKVTILLHVYVDVLRFARVTTQLFLLLRNCYV 559
           N+V ++L V VD +      T L  +   CY+
Sbjct: 96  NRVVLILKVLVDQVMILETMTPLDFMDFRCYL 127


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 464 NKVTILLHVYVDVLRFARVTTQLFLLLRNCYV 559
           N+V ++L V VD +      T L  +   CY+
Sbjct: 96  NRVVLILKVLVDQVMILETMTPLDFMDFRCYL 127


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -2

Query: 352 AQSKATKQTQPTSQLSQMMLSL 287
           AQ++ +   QP+S ++ ++LSL
Sbjct: 76  AQNQPSSYKQPSSDMADVLLSL 97


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 4   SMYRSTLSLCFFKYIFDIVYI 66
           S+ +     C+F Y+F + YI
Sbjct: 139 SLLQLVFVFCYFIYLFTVYYI 159


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 667 YLLLLIASKGYSGLHWVC 720
           YL++L A   Y    W+C
Sbjct: 78  YLIILFADFAYLETTWIC 95



 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 518 VTTQLFLLLRNCYVVL 565
           + T+L L+L+N Y++L
Sbjct: 820 LATELVLMLKNRYIIL 835


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 667 YLLLLIASKGYSGLHWVC 720
           YL++L A   Y    W+C
Sbjct: 96  YLIILFADFAYLETTWIC 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,132
Number of Sequences: 336
Number of extensions: 4391
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)