Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0783
         (830 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125956-8|AAD14728.2|  678|Caenorhabditis elegans Hypothetical ...    32   0.44 
AF125956-7|AAX55694.1|  657|Caenorhabditis elegans Hypothetical ...    32   0.44 

>AF125956-8|AAD14728.2|  678|Caenorhabditis elegans Hypothetical
           protein DC2.7a protein.
          Length = 678

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -1

Query: 452 LCAYLTDNNKSTEPLQII-REQWQAQGSVETVPLGSVQSNQTNSADKST 309
           LC+ L  N     P+++I ++ W   G  ETV + S  S   NS  KS+
Sbjct: 599 LCSILAHNPTHRAPIELIEQDHWFQFGDEETVEITSASSTSCNSEAKSS 647


>AF125956-7|AAX55694.1|  657|Caenorhabditis elegans Hypothetical
           protein DC2.7c protein.
          Length = 657

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -1

Query: 452 LCAYLTDNNKSTEPLQII-REQWQAQGSVETVPLGSVQSNQTNSADKST 309
           LC+ L  N     P+++I ++ W   G  ETV + S  S   NS  KS+
Sbjct: 569 LCSILAHNPTHRAPIELIEQDHWFQFGDEETVEITSASSTSCNSEAKSS 617


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,076,126
Number of Sequences: 27780
Number of extensions: 395222
Number of successful extensions: 840
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)