Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0781
         (834 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1341 - 32768785-32768847,32770469-32770582,32770809-327708...    30   2.0  
04_01_0009 - 178579-178638,179151-179246,179504-179565,180181-18...    28   8.0  

>04_04_1341 -
           32768785-32768847,32770469-32770582,32770809-32770858,
           32770940-32771033,32771144-32771221,32771397-32771472,
           32771557-32771651,32771748-32771927,32772491-32772802,
           32773122-32773670
          Length = 536

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
 Frame = +3

Query: 33  DEKYQQYLKHREDLENVFKNILGDDGVFLYPSHPTTA----PYHNEPLVKAFNFSYTAII 200
           D  Y++  + R  ++  FK  L    + + P+ P+ A       N+PL      + T  +
Sbjct: 422 DAYYKRAQQVRTLVKKSFKEALERYDILVSPAAPSAAYKIGEKINDPLAMYAGDTMTVNV 481

Query: 201 NSLGLPATTIPLGLGRDG 254
           N  GLPA  +P G    G
Sbjct: 482 NLAGLPALVVPCGFVEGG 499


>04_01_0009 -
           178579-178638,179151-179246,179504-179565,180181-180245,
           181271-181363,181489-181592,182070-182153,182223-182303,
           182829-182880,183048-183119,183411-183486,183568-183680,
           184056-184203,184295-184372,184511-184640,184733-184923,
           187039-187099,187201-187371
          Length = 578

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 162 LVKAFNFSYTAIINSLGLPATTIPLGLGRDGYLLVCKLL 278
           +V A+   +    N LGLPA T+P+G  + G  +  +L+
Sbjct: 504 VVSAYLMRFVIAGNLLGLPAITVPVGHDKQGLPIGLQLI 542


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,491,001
Number of Sequences: 37544
Number of extensions: 433354
Number of successful extensions: 1039
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)