Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0781
         (834 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132949-16|CAB61089.1|  535|Caenorhabditis elegans Hypothetical...    75   6e-14
AC024775-2|AAK68456.1|  452|Caenorhabditis elegans Hypothetical ...    31   1.3  
Z74473-4|CAA98953.1|  390|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z69794-4|CAA93678.3|  654|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AL132862-27|CAB60564.1|  682|Caenorhabditis elegans Hypothetical...    29   5.4  
Z77133-2|CAB00864.2|  664|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AL034393-17|CAA22315.1|  503|Caenorhabditis elegans Hypothetical...    28   9.5  
AF045638-4|AAC02564.1|  151|Caenorhabditis elegans Hypothetical ...    28   9.5  

>AL132949-16|CAB61089.1|  535|Caenorhabditis elegans Hypothetical
           protein Y53F4B.18 protein.
          Length = 535

 Score = 74.9 bits (176), Expect = 6e-14
 Identities = 35/84 (41%), Positives = 47/84 (55%)
 Frame = +3

Query: 3   LFDYTGVKFGDEKYQQYLKHREDLENVFKNILGDDGVFLYPSHPTTAPYHNEPLVKAFNF 182
           + D     F +   +  L  R+ L+   K +LG DG+ L+PS P TA YHNEP++  FNF
Sbjct: 415 IIDSRDPPFSEAHTKNLLYKRDRLKRQVKELLGTDGILLFPSWPCTAMYHNEPILAPFNF 474

Query: 183 SYTAIINSLGLPATTIPLGLGRDG 254
            YTA+ N L +P    PLGL   G
Sbjct: 475 CYTALWNVLSVPVVQCPLGLDSRG 498



 Score = 38.3 bits (85), Expect = 0.007
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 248 RWIPIGMQVIANHNNDRLCFAVAEELDRAFGGW 346
           R +P+G+QVI N   DR   A+A+ L+  F GW
Sbjct: 497 RGLPLGVQVIGNQYTDRNLIAIAQVLEEGFNGW 529


>AC024775-2|AAK68456.1|  452|Caenorhabditis elegans Hypothetical
           protein Y41D4A.6 protein.
          Length = 452

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 18/90 (20%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
 Frame = +3

Query: 24  KFGDEKYQQYLKHREDLENVFKNILGDDGVFLYPSHPTTAPYHNEPLVKAFNFS-----Y 188
           ++  + +++ LK R  + +  +    +  + + P+   TAP ++E     F+       +
Sbjct: 341 QYRQKYFERALKVRRIIHDELRQAFREVDLIVTPTASGTAPKYSELRDTLFSKEDNDDYF 400

Query: 189 TAIINSLGLPATTIPLGLGRDGYLLVCKLL 278
           T   N  G+P+ ++P+G+  DG  +  +L+
Sbjct: 401 TQAANLAGIPSISVPVGVAEDGLPIGVQLM 430


>Z74473-4|CAA98953.1|  390|Caenorhabditis elegans Hypothetical
           protein F56H9.4 protein.
          Length = 390

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 598 YFHRLLIELFLVLLDRYNVSIFKQGVTVVTPD 503
           YFH   I LFL  +D + + I    +TV  PD
Sbjct: 296 YFHSTAIILFLNKIDLFEIKITHTNITVAFPD 327


>Z69794-4|CAA93678.3|  654|Caenorhabditis elegans Hypothetical
           protein R03G8.3 protein.
          Length = 654

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 18  GVKFGDEKYQQYL-KHREDLENVFKNILGDDGV 113
           G    D+ + ++L KHRE L+N F   +GD G+
Sbjct: 386 GFPHSDKDFHKFLIKHREQLDNSFVFFMGDHGL 418


>AL132862-27|CAB60564.1|  682|Caenorhabditis elegans Hypothetical
           protein Y73F8A.35 protein.
          Length = 682

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +3

Query: 18  GVKFGDEKYQQYL-KHREDLENVFKNILGDDG 110
           G    D  +  +L KHRE L+N F  ++GD G
Sbjct: 381 GFSHADNDFYNFLVKHREKLDNSFVILMGDHG 412


>Z77133-2|CAB00864.2|  664|Caenorhabditis elegans Hypothetical
           protein K03A11.4 protein.
          Length = 664

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +3

Query: 18  GVKFGDEKYQQYL-KHREDLENVFKNILGDDGV 113
           G    D+ +  YL KHR+ L+  F  ILGD G+
Sbjct: 394 GFAHADKDFHNYLIKHRKALDESFVFILGDHGL 426


>AL034393-17|CAA22315.1|  503|Caenorhabditis elegans Hypothetical
           protein Y18D10A.23 protein.
          Length = 503

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/56 (23%), Positives = 28/56 (50%)
 Frame = +3

Query: 126 SHPTTAPYHNEPLVKAFNFSYTAIINSLGLPATTIPLGLGRDGYLLVCKLLQIITM 293
           S  +++ YHN   +     +   + + +G    ++PL LGR G +  C L+ + ++
Sbjct: 26  STDSSSTYHNSHGISWLMAAVFIVGDMMGAGMISLPLALGRSGLIAGCVLILLASI 81


>AF045638-4|AAC02564.1|  151|Caenorhabditis elegans Hypothetical
           protein C35B1.5 protein.
          Length = 151

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 9   DYTGVKFGDEKYQQYLKHRE 68
           D+  + FGDE+ Q+YLK  E
Sbjct: 86  DWVAIPFGDERIQEYLKKYE 105


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,021,760
Number of Sequences: 27780
Number of extensions: 405088
Number of successful extensions: 1024
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)