Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0778
         (756 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_05_0043 + 8503979-8504407,8506484-8506624,8506865-8506975,850...    32   0.43 
08_02_0854 - 21905054-21906308,21906396-21907300                       30   1.7  
07_01_0162 + 1138420-1138640,1138788-1138830,1139449-1140971,114...    28   7.0  

>10_05_0043 +
           8503979-8504407,8506484-8506624,8506865-8506975,
           8507746-8508330
          Length = 421

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 334 IEPEYCGVCALELDSFGMSRLHYLSKNHAKNLRK 435
           ++P  C VC ++ D+  + R+H   K H KNL +
Sbjct: 275 VQPLTCEVCKIQCDTPEVLRIHKTGKKHKKNLER 308


>08_02_0854 - 21905054-21906308,21906396-21907300
          Length = 719

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -1

Query: 534 TYKVDKTSMKHYIVKLSIYLFLIRSTIIRFRHPFSQI 424
           T++  K + KHY   + IYL  I + ++   H FS++
Sbjct: 591 THRRHKVTNKHYYHVVEIYLAAIDAILVEMNHSFSEV 627


>07_01_0162 +
           1138420-1138640,1138788-1138830,1139449-1140971,
           1141770-1142063,1142145-1142337,1142624-1142694,
           1142781-1144200
          Length = 1254

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = -3

Query: 193 LIG*RPKHWSWS-WSKHEVRRGSWWMI 116
           + G RP HW  S   +   RRG WW++
Sbjct: 545 MAGCRPTHWPRSALVRQRRRRGGWWLV 571


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,766,778
Number of Sequences: 37544
Number of extensions: 389271
Number of successful extensions: 917
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)