Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0778
         (756 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002896-1|AAH02896.1|  289|Homo sapiens zinc finger, matrin typ...    38   0.052
AY037945-1|AAK71491.1|  288|Homo sapiens zinc finger protein WIG...    38   0.052
AK022358-1|BAB14020.1|  289|Homo sapiens protein ( Homo sapiens ...    38   0.052
AF355465-1|AAK83287.1|  288|Homo sapiens WIG-1/PAG608 protein pr...    38   0.052
BC007775-1|AAH07775.1|  294|Homo sapiens zinc finger protein 346...    35   0.28 
AK131469-1|BAD18614.1|  319|Homo sapiens protein ( Homo sapiens ...    35   0.28 
AF083340-1|AAD52018.1|  294|Homo sapiens double-stranded RNA-bin...    35   0.28 
BC019598-1|AAH19598.1|  153|Homo sapiens ZMAT4 protein protein.        32   1.9  
AK023904-1|BAB14719.1|  229|Homo sapiens protein ( Homo sapiens ...    32   1.9  

>BC002896-1|AAH02896.1|  289|Homo sapiens zinc finger, matrin type 3
           protein.
          Length = 289

 Score = 37.5 bits (83), Expect = 0.052
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 337 EPEYCGVCALELDSFGMSRLHYLSKNHAKNLRKWVSKSN 453
           E +YC +C     S  +++ HY  KNHAK LR   ++SN
Sbjct: 145 ENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRLAEAQSN 183



 Score = 37.1 bits (82), Expect = 0.068
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +1

Query: 337 EPEYCGVCALELDSFGMSRLHYLSKNHAKNLRKWVSKSN 453
           +P YC +C + L+S   ++ HY  KNH K LR + + ++
Sbjct: 68  KPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANS 106


>AY037945-1|AAK71491.1|  288|Homo sapiens zinc finger protein WIG1
           protein.
          Length = 288

 Score = 37.5 bits (83), Expect = 0.052
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 337 EPEYCGVCALELDSFGMSRLHYLSKNHAKNLRKWVSKSN 453
           E +YC +C     S  +++ HY  KNHAK LR   ++SN
Sbjct: 145 ENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRLAEAQSN 183



 Score = 37.1 bits (82), Expect = 0.068
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +1

Query: 337 EPEYCGVCALELDSFGMSRLHYLSKNHAKNLRKWVSKSN 453
           +P YC +C + L+S   ++ HY  KNH K LR + + ++
Sbjct: 68  KPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANS 106


>AK022358-1|BAB14020.1|  289|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12296 fis, clone MAMMA1001820, moderately
           similar to Rattus norvegicus mRNA for PAG608 gene. ).
          Length = 289

 Score = 37.5 bits (83), Expect = 0.052
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 337 EPEYCGVCALELDSFGMSRLHYLSKNHAKNLRKWVSKSN 453
           E +YC +C     S  +++ HY  KNHAK LR   ++SN
Sbjct: 145 ENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRLAEAQSN 183



 Score = 37.1 bits (82), Expect = 0.068
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +1

Query: 337 EPEYCGVCALELDSFGMSRLHYLSKNHAKNLRKWVSKSN 453
           +P YC +C + L+S   ++ HY  KNH K LR + + ++
Sbjct: 68  KPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANS 106


>AF355465-1|AAK83287.1|  288|Homo sapiens WIG-1/PAG608 protein
           protein.
          Length = 288

 Score = 37.5 bits (83), Expect = 0.052
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 337 EPEYCGVCALELDSFGMSRLHYLSKNHAKNLRKWVSKSN 453
           E +YC +C     S  +++ HY  KNHAK LR   ++SN
Sbjct: 145 ENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRLAEAQSN 183



 Score = 37.1 bits (82), Expect = 0.068
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +1

Query: 337 EPEYCGVCALELDSFGMSRLHYLSKNHAKNLRKWVSKSN 453
           +P YC +C + L+S   ++ HY  KNH K LR + + ++
Sbjct: 68  KPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANS 106


>BC007775-1|AAH07775.1|  294|Homo sapiens zinc finger protein 346
           protein.
          Length = 294

 Score = 35.1 bits (77), Expect = 0.28
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
 Frame = +1

Query: 232 YAKT*QSGRVKRYLMRCGLT--KDSLKNIP---REILHKIEPEYCGVCALELDSFGMSRL 396
           Y     + +VKRYL   G+   K   K +    +    K + + C +C +   S  +++ 
Sbjct: 92  YQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQS 151

Query: 397 HYLSKNHAKNLR 432
           HYL K HAKNL+
Sbjct: 152 HYLGKTHAKNLK 163


>AK131469-1|BAD18614.1|  319|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16637 fis, clone TESTI4025547, highly  similar
           to Homo sapiens double-stranded RNA-binding zinc finger
           protein JAZ (JAZ). ).
          Length = 319

 Score = 35.1 bits (77), Expect = 0.28
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
 Frame = +1

Query: 232 YAKT*QSGRVKRYLMRCGLT--KDSLKNIP---REILHKIEPEYCGVCALELDSFGMSRL 396
           Y     + +VKRYL   G+   K   K +    +    K + + C +C +   S  +++ 
Sbjct: 117 YQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQS 176

Query: 397 HYLSKNHAKNLR 432
           HYL K HAKNL+
Sbjct: 177 HYLGKTHAKNLK 188


>AF083340-1|AAD52018.1|  294|Homo sapiens double-stranded
           RNA-binding zinc finger protein JAZ protein.
          Length = 294

 Score = 35.1 bits (77), Expect = 0.28
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
 Frame = +1

Query: 232 YAKT*QSGRVKRYLMRCGLT--KDSLKNIP---REILHKIEPEYCGVCALELDSFGMSRL 396
           Y     + +VKRYL   G+   K   K +    +    K + + C +C +   S  +++ 
Sbjct: 92  YQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQS 151

Query: 397 HYLSKNHAKNLR 432
           HYL K HAKNL+
Sbjct: 152 HYLGKTHAKNLK 163


>BC019598-1|AAH19598.1|  153|Homo sapiens ZMAT4 protein protein.
          Length = 153

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +1

Query: 346 YCGVCALELDSFGMSRLHYLSKNHAKNLR-KWVSKSNDGGSNQKEVNGQ 489
           YC VC+ +L S      HY S+ HA  +R  ++    DGG   K +  +
Sbjct: 15  YCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSE 63


>AK023904-1|BAB14719.1|  229|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13842 fis, clone THYRO1000793. ).
          Length = 229

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +1

Query: 346 YCGVCALELDSFGMSRLHYLSKNHAKNLR-KWVSKSNDGGSNQKEVNGQ 489
           YC VC+ +L S      HY S+ HA  +R  ++    DGG   K +  +
Sbjct: 15  YCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSE 63



 Score = 30.3 bits (65), Expect = 7.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 346 YCGVCALELDSFGMSRLHYLSKNHAKN 426
           YCG+CA   ++  M++ HY  K H KN
Sbjct: 146 YCGLCAAWFNNPLMAQQHYDGKKHKKN 172


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,745,680
Number of Sequences: 237096
Number of extensions: 2249891
Number of successful extensions: 4357
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4357
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)