Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0777
         (814 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      23   3.8  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   8.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   8.8  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 14/45 (31%), Positives = 18/45 (40%)
 Frame = -3

Query: 533 FCPKLTLPL*SLQHAFFL*ESKGPLSVSACICVGVSHVTVYPEKI 399
           FCPK        +  F    +K PL      C GV    V P++I
Sbjct: 103 FCPKAKPG----ERKFIKVTTKAPLECMCRPCTGVEESAVIPQEI 143


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 477 GVKGSVVSFCMYLRGGITCDSI 412
           G  G+ ++FC+   GG T   I
Sbjct: 89  GAVGTALTFCLQEEGGTTSQLI 110


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 699 ILF*HSRKHIDYGNWLIWFRPCFS 628
           ++F  SRK++D     + FRP F+
Sbjct: 274 VVFNGSRKNLDVMKSFVNFRPSFT 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,150
Number of Sequences: 336
Number of extensions: 4894
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)