Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0777
         (814 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1264 - 32227812-32228114,32228199-32228349,32228454-322286...    29   4.4  
04_04_1270 - 32278793-32279095,32279177-32279327,32279427-322796...    28   7.7  

>04_04_1264 -
           32227812-32228114,32228199-32228349,32228454-32228691,
           32228786-32228996,32229077-32229270,32229334-32229450,
           32229580-32230522
          Length = 718

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 50  FDSRKYKSIDYFIFDSSLQSLLD 118
           F+  + KS+DYF+FD S + +LD
Sbjct: 475 FEYLRNKSLDYFLFDDSKKPILD 497


>04_04_1270 -
           32278793-32279095,32279177-32279327,32279427-32279664,
           32279778-32279988,32280067-32280248,32280332-32280448,
           32280828-32282094
          Length = 822

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +2

Query: 68  KSIDYFIFDSSLQSLLD 118
           +S+DYF+FD S +S+LD
Sbjct: 585 RSLDYFLFDDSKKSMLD 601


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,551,397
Number of Sequences: 37544
Number of extensions: 437990
Number of successful extensions: 692
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)