Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0777
         (814 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   1.5  
SB_32809| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.9  
SB_24095| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.9  
SB_55158| Best HMM Match : DPRP (HMM E-Value=0.66)                     28   7.8  
SB_51745| Best HMM Match : DPRP (HMM E-Value=0.33)                     28   7.8  
SB_34676| Best HMM Match : Peptidase_A17 (HMM E-Value=2.4e-13)         28   7.8  
SB_51743| Best HMM Match : DPRP (HMM E-Value=0.4)                      28   7.8  
SB_40159| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.8  
SB_14793| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.8  

>SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1792

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +3

Query: 72   VLIILFLIVAYSHY*ICFDKKPLKTQINCKMNNPDE-IKRRVPLYPGFPELA 224
            VL+ILFL+VA+    + F K PL       + N D  IK  +    G P  A
Sbjct: 1389 VLVILFLVVAFEGCFLVFKKNPLSRDPVTNLTNIDPYIKENIVPVTGEPNTA 1440


>SB_32809| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 312

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
 Frame = +2

Query: 191 CSAIPRLPRVSKIGCQHIPIIPKLGLAYRVVCRH-RYHWAKVAQRKQFMKELHSFEKLQA 367
           C  I  +  +   GC    + P   L   VV  H R+HW      ++   +LH  E L +
Sbjct: 224 CVFICHMAGIPFTGCS---MNPARSLGPAVVMDHWRHHWLFTGFSEKGKMDLHRSEALTS 280

Query: 368 NALDGVRVHREFSQGILSHVIPPRRYMQ 451
           ++ D V  H + S   L++   PR + Q
Sbjct: 281 SSRDFVSPHMD-SWDFLTNSRDPRSWRQ 307


>SB_24095| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1162

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 254 PKLG-LAYRVVCRHRYHWAKVAQRKQFMKELHSFEKLQ 364
           PK G L+   +     +W K AQR +F +E+ S EK Q
Sbjct: 851 PKSGALSIEELKTEELYWIKWAQRDRFAREIESLEKEQ 888


>SB_55158| Best HMM Match : DPRP (HMM E-Value=0.66)
          Length = 208

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 254 PKLG-LAYRVVCRHRYHWAKVAQRKQFMKELHSFEKLQ 364
           PK G L+   +     +W K AQR +F +E+ S EK Q
Sbjct: 150 PKSGALSIEELKTEELYWIKWAQRDRFAREIESLEKGQ 187


>SB_51745| Best HMM Match : DPRP (HMM E-Value=0.33)
          Length = 352

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 254 PKLG-LAYRVVCRHRYHWAKVAQRKQFMKELHSFEKLQ 364
           PK G L+   +     +W K AQR +F +E+ S EK Q
Sbjct: 170 PKSGALSIEELKTEELYWIKWAQRDRFAREIESLEKGQ 207


>SB_34676| Best HMM Match : Peptidase_A17 (HMM E-Value=2.4e-13)
          Length = 1012

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 254  PKLG-LAYRVVCRHRYHWAKVAQRKQFMKELHSFEKLQ 364
            PK G L+   +     +W K AQR +F +E+ S EK Q
Sbjct: 895  PKSGALSIEELKTEELYWIKWAQRDRFAREIESLEKGQ 932


>SB_51743| Best HMM Match : DPRP (HMM E-Value=0.4)
          Length = 281

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 254 PKLG-LAYRVVCRHRYHWAKVAQRKQFMKELHSFEKLQ 364
           PK G L+   +     +W K AQR +F +E+ S EK Q
Sbjct: 183 PKSGALSIEELKTEELYWIKWAQRDRFAREIESLEKGQ 220


>SB_40159| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1497

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 254  PKLG-LAYRVVCRHRYHWAKVAQRKQFMKELHSFEKLQ 364
            PK G L+   +     +W K AQR +F +E+ S EK Q
Sbjct: 1094 PKSGALSIEELKTEELYWIKWAQRDRFAREIESLEKGQ 1131


>SB_14793| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 821

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 174 LDYSFYNLFVFLTVSYQNISNS 109
           LD SFYN ++ +T+ Y   SNS
Sbjct: 241 LDLSFYNKYIEITILYLQFSNS 262


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,918,247
Number of Sequences: 59808
Number of extensions: 542608
Number of successful extensions: 945
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2263654701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)