Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0774
         (827 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    26   0.32 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   3.0  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   3.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.2  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 359 IYQIDIKINFSYLF*WLSVLFRVTSRYSMTDYVNEN 466
           +YQ  +   F Y+F +LSV   VT  +S  D+   N
Sbjct: 127 VYQAPVLQLFLYIFTYLSVTCYVTYAWSPIDHTESN 162


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 362 YQIDIKIN-FSYLF*WLSVLFRVTSRYSMTDYVN 460
           Y++ + I+ F+ +F W  +LF + S   + DYV+
Sbjct: 265 YKMKVTIDAFNDIFGWSFLLFTLYSSLLLLDYVS 298


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 362 YQIDIKIN-FSYLF*WLSVLFRVTSRYSMTDYVN 460
           Y++ + I+ F+ +F W  +LF + S   + DYV+
Sbjct: 191 YKMKVTIDAFNDIFGWSFLLFTLYSSLLLLDYVS 224


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 469 ISNIYN*LLTSRVNFRENIYNVIEYKTFSIH 561
           + NIY+ L+  R+    NI+N +   T  IH
Sbjct: 513 LDNIYDQLIMPRIQAEVNIWNPLT-DTIPIH 542


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,982
Number of Sequences: 336
Number of extensions: 3696
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)