Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0773
         (801 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       27   0.23 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.93 
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   3.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   3.7  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   8.7  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +2

Query: 476 HRFRYGHPPHLKIREE---YPDRIMNTYSVVPSPKV 574
           H  RYGH P++ + EE    PD I++ +     PK+
Sbjct: 305 HLRRYGHTPNVVLDEEGNPCPDIIIDVHGTRRGPKI 340


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 597  TTPHFQFIN*LKTQTKPTVSTTRLSTISASAR*NYPH 707
            TT H+Q      T T+PT + ++L      +   YPH
Sbjct: 1179 TTNHWQTKTTTSTTTRPTTTVSQLIDDKCDSGQYYPH 1215



 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +2

Query: 89   NQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEA 211
            N+I  + W +  D  G     AYHGD  +  E I    ++A
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKA 951


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = +1

Query: 616 SSIS*KHRRNLLYRQRGSLRYLLPHAKTIHTHIRRPETNWCR 741
           S++S    R  L R  G  R  L H K  H    +  + W +
Sbjct: 230 STLSCYLERTELLRSSGETRLFLTHRKPFHPASTQSLSRWIK 271


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +2

Query: 644 TYCIDNEALYDICFRTLKLSTPTYGDLKPTGVADHVRRDE 763
           T+ ID   + D+C+ T++ +      +      DH  RDE
Sbjct: 568 TFVIDVVYVCDVCYSTIEEANKAGELIHKIDTEDHDIRDE 607


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +2

Query: 644 TYCIDNEALYDICFRTLKLSTPTYGDLKPTGVADHVRRDE 763
           T+ ID   + D+C+ T++ +      +      DH  RDE
Sbjct: 293 TFVIDVVYVCDVCYSTIEEANKAGELIHKIDTEDHDIRDE 332


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +3

Query: 390 DSVLDVVRKEAESCDCLQGF 449
           D V    RK AE C  LQGF
Sbjct: 233 DVVASNSRKTAEMCYKLQGF 252


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,923
Number of Sequences: 336
Number of extensions: 4101
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)