Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0773
(801 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 154 7e-38
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 153 2e-37
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 152 2e-37
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 151 5e-37
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 151 5e-37
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 150 9e-37
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 150 1e-36
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 148 5e-36
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 148 5e-36
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 83 2e-16
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 83 2e-16
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 83 3e-16
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 83 3e-16
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 83 3e-16
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 83 3e-16
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 79 3e-15
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 57 2e-08
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 56 2e-08
At5g20860.1 68418.m02477 pectinesterase family protein contains ... 32 0.39
At4g37190.1 68417.m05265 expressed protein 31 1.2
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 31 1.2
At1g17210.1 68414.m02097 expressed protein distantly related to ... 31 1.2
At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding ... 29 2.7
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 29 2.7
At5g24010.1 68418.m02821 protein kinase family protein contains ... 29 3.6
At4g22070.1 68417.m03192 WRKY family transcription factor identi... 29 3.6
At3g57880.1 68416.m06452 C2 domain-containing protein contains I... 29 3.6
At1g51570.1 68414.m05804 C2 domain-containing protein contains I... 29 3.6
At1g22610.1 68414.m02823 C2 domain-containing protein contains I... 29 3.6
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 29 4.7
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 29 4.7
At5g41315.1 68418.m05021 basic helix-loop-helix (bHLH) family pr... 28 6.3
At5g20870.1 68418.m02478 glycosyl hydrolase family 17 protein si... 28 6.3
At4g37380.1 68417.m05293 pentatricopeptide (PPR) repeat-containi... 28 8.3
At4g25800.1 68417.m03712 calmodulin-binding protein similar to c... 28 8.3
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 154 bits (373), Expect = 7e-38
Identities = 69/77 (89%), Positives = 72/77 (93%)
Frame = +3
Query: 222 KYVPRXHPRRLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 401
KYVPR LEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVL
Sbjct: 58 KYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 402 DVVRKEAESCDCLQGFQ 452
DVVRKEAE+CDCLQGFQ
Sbjct: 118 DVVRKEAENCDCLQGFQ 134
Score = 132 bits (318), Expect = 3e-31
Identities = 60/72 (83%), Positives = 65/72 (90%)
Frame = +2
Query: 509 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 688
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 154 KIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 689 TLKLSTPTYGDL 724
TLKL+ PT+GDL
Sbjct: 214 TLKLANPTFGDL 225
Score = 105 bits (251), Expect = 5e-23
Identities = 46/58 (79%), Positives = 51/58 (87%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQ 223
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGK 58
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 766 LRFPGQLNADLR 801
LRFPGQLN+DLR
Sbjct: 240 LRFPGQLNSDLR 251
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 153 bits (370), Expect = 2e-37
Identities = 68/77 (88%), Positives = 72/77 (93%)
Frame = +3
Query: 222 KYVPRXHPRRLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 401
+YVPR LEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVL
Sbjct: 58 RYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 402 DVVRKEAESCDCLQGFQ 452
DVVRKEAE+CDCLQGFQ
Sbjct: 118 DVVRKEAENCDCLQGFQ 134
Score = 133 bits (322), Expect = 1e-31
Identities = 61/72 (84%), Positives = 66/72 (91%)
Frame = +2
Query: 509 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 688
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 154 KIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 689 TLKLSTPTYGDL 724
TLKLSTP++GDL
Sbjct: 214 TLKLSTPSFGDL 225
Score = 103 bits (248), Expect = 1e-22
Identities = 44/58 (75%), Positives = 52/58 (89%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQ 223
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGR 58
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 766 LRFPGQLNADLR 801
LRFPGQLN+DLR
Sbjct: 240 LRFPGQLNSDLR 251
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 152 bits (369), Expect = 2e-37
Identities = 67/77 (87%), Positives = 72/77 (93%)
Frame = +3
Query: 222 KYVPRXHPRRLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 401
+YVPR LEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VL
Sbjct: 59 RYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 118
Query: 402 DVVRKEAESCDCLQGFQ 452
DVVRKEAE+CDCLQGFQ
Sbjct: 119 DVVRKEAENCDCLQGFQ 135
Score = 133 bits (321), Expect = 1e-31
Identities = 61/72 (84%), Positives = 66/72 (91%)
Frame = +2
Query: 509 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 688
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 155 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 214
Query: 689 TLKLSTPTYGDL 724
TLKLSTP++GDL
Sbjct: 215 TLKLSTPSFGDL 226
Score = 108 bits (259), Expect = 5e-24
Identities = 48/59 (81%), Positives = 53/59 (89%), Gaps = 1/59 (1%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASGGQ 223
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGR 59
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 766 LRFPGQLNADLR 801
LRFPGQLN+DLR
Sbjct: 241 LRFPGQLNSDLR 252
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 151 bits (366), Expect = 5e-37
Identities = 67/77 (87%), Positives = 72/77 (93%)
Frame = +3
Query: 222 KYVPRXHPRRLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 401
++VPR LEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVL
Sbjct: 58 RFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 402 DVVRKEAESCDCLQGFQ 452
DVVRKEAE+CDCLQGFQ
Sbjct: 118 DVVRKEAENCDCLQGFQ 134
Score = 132 bits (318), Expect = 3e-31
Identities = 60/72 (83%), Positives = 66/72 (91%)
Frame = +2
Query: 509 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 688
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 689 TLKLSTPTYGDL 724
TLKL+TP++GDL
Sbjct: 214 TLKLTTPSFGDL 225
Score = 105 bits (251), Expect = 5e-23
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQ 223
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGR 58
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 766 LRFPGQLNADLR 801
LRFPGQLN+DLR
Sbjct: 240 LRFPGQLNSDLR 251
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 151 bits (366), Expect = 5e-37
Identities = 66/77 (85%), Positives = 72/77 (93%)
Frame = +3
Query: 222 KYVPRXHPRRLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 401
+YVPR LEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VL
Sbjct: 59 RYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 118
Query: 402 DVVRKEAESCDCLQGFQ 452
DVVRKEAE+CDCLQGFQ
Sbjct: 119 DVVRKEAENCDCLQGFQ 135
Score = 133 bits (321), Expect = 1e-31
Identities = 61/72 (84%), Positives = 66/72 (91%)
Frame = +2
Query: 509 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 688
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 155 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 214
Query: 689 TLKLSTPTYGDL 724
TLKLSTP++GDL
Sbjct: 215 TLKLSTPSFGDL 226
Score = 112 bits (270), Expect = 2e-25
Identities = 48/59 (81%), Positives = 55/59 (93%), Gaps = 1/59 (1%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGQ 223
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGR 59
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 766 LRFPGQLNADLR 801
LRFPGQLN+DLR
Sbjct: 241 LRFPGQLNSDLR 252
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 150 bits (364), Expect = 9e-37
Identities = 66/77 (85%), Positives = 72/77 (93%)
Frame = +3
Query: 222 KYVPRXHPRRLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 401
+YVPR LEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VL
Sbjct: 58 RYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 117
Query: 402 DVVRKEAESCDCLQGFQ 452
DVVRKEAE+CDCLQGFQ
Sbjct: 118 DVVRKEAENCDCLQGFQ 134
Score = 132 bits (318), Expect = 3e-31
Identities = 60/72 (83%), Positives = 66/72 (91%)
Frame = +2
Query: 509 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 688
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 689 TLKLSTPTYGDL 724
TLKL+TP++GDL
Sbjct: 214 TLKLTTPSFGDL 225
Score = 109 bits (263), Expect = 2e-24
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQ 223
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGR 58
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 766 LRFPGQLNADLR 801
LRFPGQLN+DLR
Sbjct: 240 LRFPGQLNSDLR 251
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 150 bits (363), Expect = 1e-36
Identities = 68/77 (88%), Positives = 71/77 (92%)
Frame = +3
Query: 222 KYVPRXHPRRLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 401
KYVPR LEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVL
Sbjct: 58 KYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 402 DVVRKEAESCDCLQGFQ 452
DVVRKEAE+ DCLQGFQ
Sbjct: 118 DVVRKEAENSDCLQGFQ 134
Score = 132 bits (318), Expect = 3e-31
Identities = 60/72 (83%), Positives = 65/72 (90%)
Frame = +2
Query: 509 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 688
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 154 KIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 689 TLKLSTPTYGDL 724
TLKL+ PT+GDL
Sbjct: 214 TLKLANPTFGDL 225
Score = 107 bits (257), Expect = 8e-24
Identities = 47/58 (81%), Positives = 52/58 (89%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQ 223
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGK 58
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 766 LRFPGQLNADLR 801
LRFPGQLN+DLR
Sbjct: 240 LRFPGQLNSDLR 251
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 148 bits (358), Expect = 5e-36
Identities = 65/77 (84%), Positives = 71/77 (92%)
Frame = +3
Query: 222 KYVPRXHPRRLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 401
++VPR LEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVL
Sbjct: 58 RFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 402 DVVRKEAESCDCLQGFQ 452
DVVRKEAE+CDCLQGFQ
Sbjct: 118 DVVRKEAENCDCLQGFQ 134
Score = 132 bits (318), Expect = 3e-31
Identities = 60/72 (83%), Positives = 66/72 (91%)
Frame = +2
Query: 509 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 688
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 689 TLKLSTPTYGDL 724
TLKL+TP++GDL
Sbjct: 214 TLKLTTPSFGDL 225
Score = 110 bits (265), Expect = 9e-25
Identities = 48/58 (82%), Positives = 52/58 (89%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQ 223
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGR 58
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 766 LRFPGQLNADLR 801
LRFPGQLN+DLR
Sbjct: 240 LRFPGQLNSDLR 251
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 148 bits (358), Expect = 5e-36
Identities = 65/77 (84%), Positives = 71/77 (92%)
Frame = +3
Query: 222 KYVPRXHPRRLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 401
++VPR LEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVL
Sbjct: 58 RFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 402 DVVRKEAESCDCLQGFQ 452
DVVRKEAE+CDCLQGFQ
Sbjct: 118 DVVRKEAENCDCLQGFQ 134
Score = 132 bits (318), Expect = 3e-31
Identities = 60/72 (83%), Positives = 66/72 (91%)
Frame = +2
Query: 509 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 688
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 689 TLKLSTPTYGDL 724
TLKL+TP++GDL
Sbjct: 214 TLKLTTPSFGDL 225
Score = 110 bits (265), Expect = 9e-25
Identities = 48/58 (82%), Positives = 52/58 (89%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQ 223
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGR 58
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 766 LRFPGQLNADLR 801
LRFPGQLN+DLR
Sbjct: 240 LRFPGQLNSDLR 251
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 83.4 bits (197), Expect = 2e-16
Identities = 39/78 (50%), Positives = 52/78 (66%)
Frame = +3
Query: 216 AAKYVPRXHPRRLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 395
A K+VPR LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDL 117
Query: 396 VLDVVRKEAESCDCLQGF 449
LD VRK A++C LQGF
Sbjct: 118 CLDRVRKLADNCTGLQGF 135
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/72 (45%), Positives = 49/72 (68%)
Frame = +2
Query: 509 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 688
++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215
Query: 689 TLKLSTPTYGDL 724
+L + PTY +L
Sbjct: 216 SLDIERPTYTNL 227
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 223
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 224 VRAPR 238
PR
Sbjct: 61 -HVPR 64
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 83.4 bits (197), Expect = 2e-16
Identities = 39/78 (50%), Positives = 52/78 (66%)
Frame = +3
Query: 216 AAKYVPRXHPRRLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 395
A K+VPR LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDL 117
Query: 396 VLDVVRKEAESCDCLQGF 449
LD VRK A++C LQGF
Sbjct: 118 CLDRVRKLADNCTGLQGF 135
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/72 (45%), Positives = 49/72 (68%)
Frame = +2
Query: 509 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 688
++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215
Query: 689 TLKLSTPTYGDL 724
+L + PTY +L
Sbjct: 216 SLDIERPTYTNL 227
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 223
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 224 VRAPR 238
PR
Sbjct: 61 -HVPR 64
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 82.6 bits (195), Expect = 3e-16
Identities = 38/78 (48%), Positives = 52/78 (66%)
Frame = +3
Query: 216 AAKYVPRXHPRRLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 395
A K+VPR LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDL 117
Query: 396 VLDVVRKEAESCDCLQGF 449
LD +RK A++C LQGF
Sbjct: 118 CLDRIRKLADNCTGLQGF 135
Score = 78.6 bits (185), Expect = 4e-15
Identities = 34/72 (47%), Positives = 51/72 (70%)
Frame = +2
Query: 509 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 688
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
Query: 689 TLKLSTPTYGDL 724
+L + PTY +L
Sbjct: 216 SLNIERPTYTNL 227
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQ 223
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 224 VRAPR 238
PR
Sbjct: 61 -HVPR 64
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 82.6 bits (195), Expect = 3e-16
Identities = 38/78 (48%), Positives = 52/78 (66%)
Frame = +3
Query: 216 AAKYVPRXHPRRLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 395
A K+VPR LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDL 117
Query: 396 VLDVVRKEAESCDCLQGF 449
LD +RK A++C LQGF
Sbjct: 118 CLDRIRKLADNCTGLQGF 135
Score = 78.6 bits (185), Expect = 4e-15
Identities = 34/72 (47%), Positives = 51/72 (70%)
Frame = +2
Query: 509 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 688
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
Query: 689 TLKLSTPTYGDL 724
+L + PTY +L
Sbjct: 216 SLNIERPTYTNL 227
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQ 223
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 224 VRAPR 238
PR
Sbjct: 61 -HVPR 64
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 82.6 bits (195), Expect = 3e-16
Identities = 38/78 (48%), Positives = 52/78 (66%)
Frame = +3
Query: 216 AAKYVPRXHPRRLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 395
A K+VPR LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDL 117
Query: 396 VLDVVRKEAESCDCLQGF 449
LD +RK A++C LQGF
Sbjct: 118 CLDRIRKLADNCTGLQGF 135
Score = 78.6 bits (185), Expect = 4e-15
Identities = 34/72 (47%), Positives = 51/72 (70%)
Frame = +2
Query: 509 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 688
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
Query: 689 TLKLSTPTYGDL 724
+L + PTY +L
Sbjct: 216 SLSIERPTYTNL 227
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQ 223
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 224 VRAPR 238
PR
Sbjct: 61 -HVPR 64
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 82.6 bits (195), Expect = 3e-16
Identities = 38/78 (48%), Positives = 52/78 (66%)
Frame = +3
Query: 216 AAKYVPRXHPRRLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 395
A K+VPR LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDL 117
Query: 396 VLDVVRKEAESCDCLQGF 449
LD +RK A++C LQGF
Sbjct: 118 CLDRIRKLADNCTGLQGF 135
Score = 78.6 bits (185), Expect = 4e-15
Identities = 34/72 (47%), Positives = 51/72 (70%)
Frame = +2
Query: 509 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 688
++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+YDIC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
Query: 689 TLKLSTPTYGDL 724
+L + PTY +L
Sbjct: 216 SLSIERPTYTNL 227
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGQ 223
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 224 VRAPR 238
PR
Sbjct: 61 -HVPR 64
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 79.4 bits (187), Expect = 3e-15
Identities = 35/78 (44%), Positives = 53/78 (67%)
Frame = +3
Query: 216 AAKYVPRXHPRRLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDS 395
+ ++VPR LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+
Sbjct: 58 SGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDT 117
Query: 396 VLDVVRKEAESCDCLQGF 449
L+ +RK A++C LQGF
Sbjct: 118 CLERLRKLADNCTGLQGF 135
Score = 77.4 bits (182), Expect = 1e-14
Identities = 32/59 (54%), Positives = 44/59 (74%)
Frame = +2
Query: 548 YSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDL 724
+++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +L
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNL 227
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 223
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S GQ
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 224 VRAPR 238
PR
Sbjct: 61 -HVPR 64
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +3
Query: 225 YVPRXHPRRLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSV 398
Y+PR LEP ++ +++G + ++ +N GAGNNWA G Y +G + + +
Sbjct: 60 YIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEI 118
Query: 399 LDVVRKEAESCDCLQGF 449
+D++ +EA+ D L+GF
Sbjct: 119 MDMIDREADGSDSLEGF 135
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 512 IREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 688
+ + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN AL I
Sbjct: 157 LNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVE 216
Query: 689 TLKLSTPTY 715
L L+ PT+
Sbjct: 217 RLHLTNPTF 225
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +2
Query: 53 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEA 211
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQA 55
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +3
Query: 225 YVPRXHPRRLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSV 398
Y+PR LEP ++ +++G + ++ +N GAGNNWA G Y +G + + +
Sbjct: 60 YIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEI 118
Query: 399 LDVVRKEAESCDCLQGF 449
+D++ +EA+ D L+GF
Sbjct: 119 MDMIDREADGSDSLEGF 135
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 512 IREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 688
+ + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN AL I
Sbjct: 157 LNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVE 216
Query: 689 TLKLSTPTY 715
L L+ PT+
Sbjct: 217 RLHLTNPTF 225
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +2
Query: 53 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEA 211
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQA 55
>At5g20860.1 68418.m02477 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 512
Score = 32.3 bits (70), Expect = 0.39
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +2
Query: 575 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLST 706
S+ ++ P ++++ +LV D TY + + ++ D C R +K+ST
Sbjct: 77 SNLLIPPLSSSMGSSKLVSLEDSTYTLPSPSVSDSCERLMKMST 120
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 50 MREIVHIQAGQCGNQIGAKFWEIISDEHGI 139
MREIV IQ G+ N +G+ FW + G+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGL 30
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +3
Query: 384 LVDSVLDVVRKEAESCDCLQGF 449
+++SV VVRKEAE+C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At1g17210.1 68414.m02097 expressed protein distantly related to
dentin phosphoryn [Homo sapiens] (GI:4322670)
Length = 958
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -3
Query: 334 DCPK-TKLSGRKICPKGPERTESMV--PGSSRRGWXRGTYLAAGGFIVV 197
DC + + S R CP GP R +S + PG SR+ + + A+G + V+
Sbjct: 280 DCEEHSAQSARNGCPSGPARNQSRLQDPGPSRKQFSASSRKASGNYEVL 328
>At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 656
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -1
Query: 501 GGCPYRNRCRRRASVSVGIPGGNHTIPLPFERRLKLNRRAQHPPCS 364
G CP R R S G GG P+P RR KL P CS
Sbjct: 32 GSCPRRRIQERFKSEQGGGGGGGDDFPVPVTRR-KLRAEPNCPRCS 76
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = -3
Query: 232 GTYLAAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFP 53
G + AAGGF + I + + ++ VP G VL+GD DL A L + FP
Sbjct: 132 GFHKAAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFP 190
Query: 52 HFVL 41
+L
Sbjct: 191 DGIL 194
>At5g24010.1 68418.m02821 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 824
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 466 SECVSWNPWRQSHDSASFRTTSKTESTSSAPSV*CPLAQL 347
SE W P R+ S++ RTT +T S+S ++ A+L
Sbjct: 443 SESTGWTPLRRFRGSSNSRTTERTVSSSGYHTLRISFAEL 482
>At4g22070.1 68417.m03192 WRKY family transcription factor identical
to WRKY transcription factor 31 (WRKY31) GI:15990589
from [Arabidopsis thaliana]
Length = 538
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = -1
Query: 501 GGCPYRN---RCRRRASVSVGIPGGNHTIPLP 415
GGCP R RC S+ + GNH PLP
Sbjct: 326 GGCPVRKQVQRCAEDRSILITTYEGNHNHPLP 357
>At3g57880.1 68416.m06452 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 773
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +2
Query: 476 HRFRYGHPPHLKIR-----EEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 616
+R+R HPPH+ R +PD + + P+ + SD V Y+ S+
Sbjct: 633 YRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTSRPSDIVRMRYDRLRSI 684
>At1g51570.1 68414.m05804 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 776
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +2
Query: 476 HRFRYGHPPHLKIR-----EEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 616
+R+R HPPH+ R +PD + + P+ + SD V Y+ S+
Sbjct: 636 YRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTSRPSDIVRMRYDRLRSI 687
>At1g22610.1 68414.m02823 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1029
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +2
Query: 476 HRFRYGHPPHLKIR-----EEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 616
+R+R HPPH+ R +PD + + P+ + +D V Y+ SV
Sbjct: 889 YRYRPRHPPHMDARVSQADNAHPDELDEEFDTFPTSRPADIVRMRYDRLRSV 940
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 459 VSVGIPGGNHTIPLPFERRLKLNRRAQHPPCSVPWPSC 346
VS G+PG HT P ++ ++ +++ P S PW SC
Sbjct: 136 VSSGLPGKQHTSSSPPSFVVEPSKNSKYIPSSSPW-SC 172
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = -3
Query: 448 NPWRQSHDSASFRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKGPERTES 269
N R DSA+ ++S ++ S+ S + PAP P L ICP G +
Sbjct: 98 NNLRPRSDSATTSSSSHSQPLLSSSSS----SATSPAPTSPANVLPTGNICPSGKIQITG 153
Query: 268 MVPGSSRR---GWXRGTY 224
M SR G GTY
Sbjct: 154 MTQSRSRSDVLGSGTGTY 171
>At5g41315.1 68418.m05021 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain ;annotation temporarily based on
supporting cDNA gi|17224394|gb|AF246291.1|AF246291
Length = 637
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -3
Query: 799 AGRRSTVRGTAALVTPDMVSDTSWFQVAVC 710
AG + T R +AA ++P+ ++DT W+ + VC
Sbjct: 97 AGSQVTRRASAAALSPEDLADTEWYYL-VC 125
>At5g20870.1 68418.m02478 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 [Nicotiana tabacum]
Length = 501
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1
Query: 267 WCRAQVDEDGRGARTWPPEASL*YTLMRSNCKSESP 160
WC G GA TW +AS Y ++C S P
Sbjct: 375 WCVLSTQAAGNGAATW--QASATYACQNADCTSLGP 408
>At4g37380.1 68417.m05293 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 632
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 413 KGSGIV*LPPGIPTDTLARRRHRFRYGHPPHLKIREEY 526
K GIV PGI T + + H FR G H K +E Y
Sbjct: 490 KEKGIV-KEPGISTIEIENKVHEFRAGDREHSKSKEIY 526
>At4g25800.1 68417.m03712 calmodulin-binding protein similar to
calmodulin-binding protein TCB60 GI:1698548 from
[Nicotiana tabacum]
Length = 601
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 497 PPHLKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLS 613
P L I + P + +YS VP + + +E YN TL+
Sbjct: 386 PERLDISQTDPVTALASYSTVPLSQFPEFAIEGYNQTLT 424
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,420,161
Number of Sequences: 28952
Number of extensions: 369346
Number of successful extensions: 1129
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1814318400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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