Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0772
         (711 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4XP80 Cluster: Putative uncharacterized protein; n=1; ...    34   4.0  
UniRef50_Q387D8 Cluster: Putative uncharacterized protein; n=1; ...    33   9.2  

>UniRef50_Q4XP80 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 73

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = -3

Query: 607 LLYMYICMYVH*WRGKGVIMYVVLYQ*YNPQAKSLKALF--CTILVVYSLQRLKWFV 443
           +L MYICMYV  +    V  Y+ +Y  YN   K +   +  C+I+ +  ++ L +F+
Sbjct: 10  ILCMYICMYVCMYIYMYVCTYIYMYDIYNEYLKVVNKFYSNCSIIFLLIIKLLDFFM 66


>UniRef50_Q387D8 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 1649

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -1

Query: 642 IDMLQFLAENKNYYI-CTYVCMYTDGGVRA*LCMWYYINNTIHKQNLSKLCSA 487
           +D  +FL +  N+ +    +C++ D G R  +C WY +  T    N    C A
Sbjct: 217 LDFPEFLLDVSNFGVPLEELCLFEDDGYRRHICSWYKLRRTPEVDNERISCEA 269


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,262,879
Number of Sequences: 1657284
Number of extensions: 10903590
Number of successful extensions: 20757
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20617
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)