Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0771
(815 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 32 0.085
SPAC19A8.07c |||U3 snoRNP-associated protein Imp4 |Schizosacchar... 29 0.79
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 0.79
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 29 1.0
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 29 1.0
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 29 1.0
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 28 1.8
SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr ... 27 3.2
SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomy... 27 3.2
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 27 4.2
SPCC1672.05c |||tyrosine-tRNA ligase |Schizosaccharomyces pombe|... 27 4.2
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 4.2
SPCC962.03c |cut15||karyopherin Cut15|Schizosaccharomyces pombe|... 27 4.2
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 27 4.2
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 26 5.6
SPBC16D10.10 |||tRNA specific adenosine deaminase subunit Tad2 |... 26 5.6
SPCC569.08c |ade5|ade8|phosphoribosylglycinamide formyltransfera... 26 7.4
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 26 7.4
SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 26 7.4
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 26 7.4
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 25 9.7
SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual 25 9.7
SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr 1... 25 9.7
SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1... 25 9.7
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 32.3 bits (70), Expect = 0.085
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +1
Query: 472 LHRRHQGGSRRQVETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK---AIE 642
L R + GS + HEE + ELR++++++++ E+ ++ E+Y+ A+E
Sbjct: 90 LSMRTETGS--MAKAHEEVSQQINTELRNKIREYIDQTEQQKVVAANAIEELYQKKTALE 147
Query: 643 DKMTTAADKRDENLKKMIERLRET 714
++ D + + K+ +R+T
Sbjct: 148 IDLSEKKDAYEYSCNKLNSYMRQT 171
>SPAC19A8.07c |||U3 snoRNP-associated protein Imp4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 289
Score = 29.1 bits (62), Expect = 0.79
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +1
Query: 499 RRQV--ETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQ--QTAEVYKAIEDKMTTAAD 666
RRQ + ++E +EA +NE R L+ LEG ++ L++ Q + YK E + T +
Sbjct: 9 RRQFIYKRNQELQEAKLNEKRRALRKALEGNKELNKDLQEDSQLQKDYKYDESRAT--QE 66
Query: 667 KRDENLKKMIERLRE 711
+ + NL RL E
Sbjct: 67 ETETNLDDEYHRLGE 81
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.1 bits (62), Expect = 0.79
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 508 VETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENL- 684
VE+ RE I LRS L D + VE + E + E+ K +ED A ++D L
Sbjct: 994 VESEISTREEKITSLRSELLDLNKRVEVLKEEKESSSKELAKQLED----AVREKDSALS 1049
Query: 685 -KKMIERLR 708
KK E++R
Sbjct: 1050 FKKDYEKIR 1058
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 28.7 bits (61), Expect = 1.0
Identities = 21/65 (32%), Positives = 37/65 (56%)
Frame = +1
Query: 511 ETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKK 690
E +EE + + E +++K+ +KTR + EQQT + IE+++ +K ++ LKK
Sbjct: 402 EKNEEVKS--LREKAAKVKNDCTSEKKTRQSYEQQTVK----IEEQLKFLLNK-EKKLKK 454
Query: 691 MIERL 705
IE L
Sbjct: 455 SIEAL 459
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 28.7 bits (61), Expect = 1.0
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = +1
Query: 541 INELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLR 708
+N+L + L+D L G+E +RLT + + + A D + L++ +++L+
Sbjct: 494 VNDLIAELQDELRGIE-SRLTSVLSECNMLRETASEEKNAFDAESDKLERELQQLK 548
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 28.7 bits (61), Expect = 1.0
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 352 EAEGSRREET*LGS**DGRHCSEDGQDRGGVPHPQRADE*LH 477
EAE R + LG G+HCSE G P P+ LH
Sbjct: 320 EAEAKARRDKRLGELLTGKHCSECGTPLYSDPSPEELGIWLH 361
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +1
Query: 508 VETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLK 687
VE K E + + + SR+K + +E TR L +Q ++ + E+K+ + E++
Sbjct: 478 VEAESSKNELWDSMMVSRMKTQEQSIELTR--LYKQLQDIEEDYENKLMRMEQQWREDVD 535
Query: 688 KMIERLRE 711
++ E + E
Sbjct: 536 QLQEYVEE 543
>SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 622
Score = 27.1 bits (57), Expect = 3.2
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 77 SYQHGDDQMDYLTCDGVTSRWPANC 3
+Y+H + ++ L GV+SRW C
Sbjct: 325 NYEHTEKELSVLQFKGVSSRWDFRC 349
>SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 447
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 118 AVHPFYQQLIGGRRRRNRSVNQ 183
A HP YQ L+GG +N S+ Q
Sbjct: 235 AKHPIYQSLLGGGDIQNESLQQ 256
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 26.6 bits (56), Expect = 4.2
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +1
Query: 505 QVETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENL 684
Q T E +RE + + + +++ E + +TR+ LE+Q V IED E L
Sbjct: 453 QAWTSESERE--LEKKKEQVEKKQEELMQTRIVLEEQVFLVENMIEDAKAKRKFSEVETL 510
Query: 685 KKMIERLRE 711
+ L E
Sbjct: 511 LSSLAPLHE 519
>SPCC1672.05c |||tyrosine-tRNA ligase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 401
Score = 26.6 bits (56), Expect = 4.2
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +1
Query: 472 LHRRHQGGSRRQVETHEEKREAYINELRS--RLKDHLEGVEKTRLTLEQQTAEVYKAIED 645
+ R Q G R +T+EE +AY + S LK LE T L Q+ + Y + D
Sbjct: 281 IDRPEQFGGRMVFKTYEEVEKAYKDLTLSPQDLKLGLESSVNTLLAGVQEQLKQYPDL-D 339
Query: 646 KMTTAADKRDENLKKMIERLRE 711
+ AA ++LKK +++ ++
Sbjct: 340 SILKAAYPDPKDLKKAMKQKKQ 361
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/80 (18%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 478 RRHQGGSRRQVETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIE--DKM 651
R G ++++ ++++ INEL R+K + V + T+++ ++ E +++
Sbjct: 526 REENEGLTLKIDSITKEKDRLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEV 585
Query: 652 TTAADKRDENLKKMIERLRE 711
A +D +L++ E + +
Sbjct: 586 MNAFQYKDNDLRRFHESINK 605
>SPCC962.03c |cut15||karyopherin Cut15|Schizosaccharomyces pombe|chr
3|||Manual
Length = 542
Score = 26.6 bits (56), Expect = 4.2
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +1
Query: 457 RADE*LHRRHQGGSRRQVETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQ 612
+ADE L RR + +Q+E ++KRE +N+ R L D E E+T + LEQ
Sbjct: 23 QADE-LRRRRE---TQQIEIRKQKREENLNK-RRNLVDVQEPAEET-IPLEQ 68
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -1
Query: 221 GGDEFDLLRLLSSWFTD--RFLRRRPPMSCW 135
G DE + L SWF D +F+ R P + W
Sbjct: 679 GNDELTSKKFLKSWFADPSKFVDRTPENAPW 709
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +1
Query: 559 RLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLR 708
RL + +++ + +T ++A E+KM D + L + ER+R
Sbjct: 312 RLNNEKRAIQQKITQMTNETESFFQAKEEKMIETRDALNSELSEYHERIR 361
>SPBC16D10.10 |||tRNA specific adenosine deaminase subunit Tad2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 467 NNFIVATKEALDAKWRPTRKNA 532
N+F+ +K A D+ PTR+NA
Sbjct: 150 NDFVTLSKPAYDSSIHPTRENA 171
>SPCC569.08c |ade5|ade8|phosphoribosylglycinamide
formyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 207
Score = 25.8 bits (54), Expect = 7.4
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +2
Query: 191 AAEEGQIHHHRNPLPRDVEGRLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAAE 370
AA++G+I H G + + VI A G P+ + T S+E ++EK+ AAE
Sbjct: 141 AAQQGKITH---------TGAMVHWVIAAVDEGKPIIVQEVPILSTDSIEALEEKIHAAE 191
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 11 PAIAT*LRHTLDSPFDHHHADRTRK 85
P + T LR D P DH A +TR+
Sbjct: 585 PGLRTKLRRNFDLPSDHVKAKKTRR 609
>SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 497
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 297 TGTPTGSASITSYANRPSTSLGSG 226
TG P+G AS++ A+ STS +G
Sbjct: 206 TGAPSGKASLSRAASNSSTSARAG 229
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/55 (20%), Positives = 28/55 (50%)
Frame = +1
Query: 508 VETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKR 672
V + E + E + ++ +EG++ + L + +E+ ++E ++TT + R
Sbjct: 396 VNKNYEISSGKLKERQVAVRARIEGIKAHEMFLNNRVSEINSSLEKQLTTQKELR 450
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 150 RSAPKKPVGKPRTKQPKKVKFITTEIRCQEMSK 248
+ +PK+P KP T++P+ + ++ R E+SK
Sbjct: 481 KGSPKEPKAKPSTERPETHRTLSYS-RLSELSK 512
>SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 317 PEKTPSVEEIQEKLKAAEERRRSLE 391
PE TP+VE++ E L E R SL+
Sbjct: 301 PESTPAVEKVSENL--GSETRESLQ 323
>SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1004
Score = 25.4 bits (53), Expect = 9.7
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 535 AYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRD 675
A IN+ ++ + L G+E T LE+ +AE I+D + A K+D
Sbjct: 949 AQINDHLAQRGNMLGGIENTMDDLEEMSAEWANEIKDSL--AGTKKD 993
>SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 881
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 302 RRADSPEKTPSVEEIQEKLK 361
RRAD PE+TPS ++ L+
Sbjct: 21 RRADRPEETPSSSVYEQNLR 40
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,869,141
Number of Sequences: 5004
Number of extensions: 54346
Number of successful extensions: 232
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 232
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 398435810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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