Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0771
(815 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011) 34 0.12
SB_56390| Best HMM Match : CHASE3 (HMM E-Value=0.042) 32 0.48
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 32 0.48
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 32 0.48
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 32 0.48
SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38) 32 0.64
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 31 0.84
SB_55243| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_44588| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_17373| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 31 1.1
SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06) 31 1.1
SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045) 31 1.1
SB_21989| Best HMM Match : Spectrin (HMM E-Value=0) 31 1.5
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 30 2.0
SB_39788| Best HMM Match : Ricin_B_lectin (HMM E-Value=6.4e-14) 30 2.0
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_24737| Best HMM Match : KID (HMM E-Value=0.096) 30 2.6
SB_50413| Best HMM Match : GRP (HMM E-Value=0.15) 30 2.6
SB_16340| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_6334| Best HMM Match : zf-C2H2 (HMM E-Value=1.5e-26) 29 3.4
SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_35915| Best HMM Match : DUF593 (HMM E-Value=0.12) 29 4.5
SB_28574| Best HMM Match : KE2 (HMM E-Value=1.2) 29 4.5
SB_25602| Best HMM Match : Endomucin (HMM E-Value=1.1) 29 4.5
SB_18775| Best HMM Match : DUF1409 (HMM E-Value=0.78) 29 4.5
SB_14736| Best HMM Match : Exonuc_VII_S (HMM E-Value=1.2) 29 4.5
SB_14482| Best HMM Match : Cornifin (HMM E-Value=3.7) 29 4.5
SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046) 29 4.5
SB_41994| Best HMM Match : F-box (HMM E-Value=1.4e-06) 29 4.5
SB_16617| Best HMM Match : Vicilin_N (HMM E-Value=5.5) 29 4.5
SB_11461| Best HMM Match : NHL (HMM E-Value=0) 29 6.0
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_23841| Best HMM Match : LRR_1 (HMM E-Value=1e-09) 29 6.0
SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081) 29 6.0
SB_48415| Best HMM Match : Pox_A32 (HMM E-Value=0.014) 28 7.9
SB_12695| Best HMM Match : Linker_histone (HMM E-Value=1.6e-38) 28 7.9
SB_44228| Best HMM Match : LMP (HMM E-Value=0.11) 28 7.9
SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7) 28 7.9
>SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011)
Length = 299
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/50 (32%), Positives = 32/50 (64%)
Frame = +1
Query: 502 RQVETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKM 651
+++E +EKR++Y+ L++RL + VE+ R T+E+ K +E+K+
Sbjct: 207 QKMEMTKEKRDSYMEALKTRLHEKSLDVEQKRQTMEEIQMFQRKILEEKL 256
Score = 32.7 bits (71), Expect = 0.37
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Frame = +1
Query: 541 INELRSRLKDHLEGVEK--------TRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMI 696
I ELRS ++ L+ E+ + +EQQ+ + + I KM +KRD ++ +
Sbjct: 165 IEELRSAKEEKLQAHERRVRVAQSIAQEQIEQQSKLIEEKIMQKMEMTKEKRDSYMEALK 224
Query: 697 ERLRET*GTSSQGPRR*PGEVQSFESAI-QEKLQ 795
RL E + R+ E+Q F+ I +EKLQ
Sbjct: 225 TRLHEK-SLDVEQKRQTMEEIQMFQRKILEEKLQ 257
>SB_56390| Best HMM Match : CHASE3 (HMM E-Value=0.042)
Length = 440
Score = 32.3 bits (70), Expect = 0.48
Identities = 16/65 (24%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +1
Query: 541 INELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDE--NLKKMIERLRET 714
+N+ +L + +EG++ T +TL+QQ ++ + + + TT+ + R + ++K + +E
Sbjct: 251 LNDFVIQLDEEVEGMQSTIMTLQQQIKDIKQRLATETTTSQELRTKCHQVEKCLSEAKEQ 310
Query: 715 *GTSS 729
T S
Sbjct: 311 NATLS 315
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 32.3 bits (70), Expect = 0.48
Identities = 22/96 (22%), Positives = 46/96 (47%)
Frame = +1
Query: 499 RRQVETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDE 678
+R E E +++ + S +KD L+ + LEQ+ E+ + E ++ +K DE
Sbjct: 629 QRNQEVFEAQQKEQFEKQLSLVKDELQPYKSKCQELEQENKELMEKYERDLSELKNKMDE 688
Query: 679 NLKKMIERLRET*GTSSQGPRR*PGEVQSFESAIQE 786
+ ER + T +G + E+Q +++ ++E
Sbjct: 689 ----VEERYKMTENIEEEGMKTLEHELQIYKAKVKE 720
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = +1
Query: 496 SRRQVETHEEKREAYINELRSRLKDHLEGVEKTRLT---LEQQTAEVYKAIED-KMTTAA 663
++ ++E+ +EK E+ + ELR++L D LE + L +++ A + +E+ K A
Sbjct: 115 TQMEMESEQEKHESELEELRAQL-DKLENSDTESLVEERMKELKANYEREVEELKERLAK 173
Query: 664 DKRDENLKKMIERLRE 711
+ D ++ ER++E
Sbjct: 174 GESDARDSELTERIQE 189
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/75 (24%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Frame = +1
Query: 502 RQVETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV---YKAIEDKMTTAADKR 672
++ E + + E ++EL + E VEK +++ +++ YKA+E+K + +++
Sbjct: 941 KEAENSKLETERQLSELSKETCHYKEKVEKQNQEIQELQSKINLLYKAVEEKDSEINNQK 1000
Query: 673 --DENLKKMIERLRE 711
++NL K+++ +RE
Sbjct: 1001 IENDNLGKVVDSMRE 1015
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 212 HHHRNPLPRDVEGRLAYEVILAEPVGVPVPRRADSPEKTP 331
HHH +P P V R+ + V PV VPVP R P +P
Sbjct: 209 HHHHHPFPVRVPVRVPFRV----PVRVPVPVRVPVPIHSP 244
>SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38)
Length = 2084
Score = 31.9 bits (69), Expect = 0.64
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = +1
Query: 409 HCSEDGQDRGGVPHPQRADE*LHRRHQGGSRRQVETH-EEKREAYINELRSRLKDHLEG- 582
H E+ QD+ G + L + QVE E++RE + E ++ +D +E
Sbjct: 61 HYIEEDQDKLGEALEEERQRMLQEKSDW--LEQVERQMEQEREVFAKE-KAEFQDQIENQ 117
Query: 583 VEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLRE 711
+EK R L + AE+ + +E ++ D + ++ +ER+ E
Sbjct: 118 IEKEREILAKARAEIQEQMEGQIGQERDILAKEKEEFMERMYE 160
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 31.5 bits (68), Expect = 0.84
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 547 ELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLRE 711
E R KD E EK R +QQ + K E K+ +KR++ +K ERLRE
Sbjct: 908 EKEKREKDKREREEKERKRRQQQLEKEKKEKEKKLLIEKEKREKEKQK--ERLRE 960
>SB_55243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 31.5 bits (68), Expect = 0.84
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 494 ALDAKWRPTRKNARPTSTSCAPVSRIILRVLRRPG*PWNS 613
A + W RK ARP S SC+P + VL RP W+S
Sbjct: 2 ACPSVWEQRRKPARPRSNSCSPGDPL---VLERPPPRWSS 38
>SB_44588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 31.5 bits (68), Expect = 0.84
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 135 PAAHRRSAPKKPVGKPRTKQPKK 203
PAA + +PKKP K TK PKK
Sbjct: 118 PAAKKAKSPKKPAPKKATKSPKK 140
>SB_17373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 31.5 bits (68), Expect = 0.84
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 135 PAAHRRSAPKKPVGKPRTKQPKK 203
PAA + +PKKP K TK PKK
Sbjct: 181 PAAKKAKSPKKPAPKKATKSPKK 203
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +1
Query: 484 HQGGSRRQ-VETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTA 660
+QG S+ Q + H EK EA NE++ + K+ L+ +++ +E++ E K++ D++
Sbjct: 456 NQGKSKEQEAQEHSEKYEALKNEMQQQGKEWLKQDKESHKQIEEREKEC-KSLRDEVRKL 514
Query: 661 AD 666
D
Sbjct: 515 RD 516
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +1
Query: 502 RQVETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAAD---KR 672
+++ T +EK + + ++L+D L K++ Q+ +E Y+A++++M K+
Sbjct: 430 KRMATEQEKESKSLRKKNNQLEDELTNQGKSKEQEAQEHSEKYEALKNEMQQQGKEWLKQ 489
Query: 673 DENLKKMIE 699
D+ K IE
Sbjct: 490 DKESHKQIE 498
>SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06)
Length = 1231
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/92 (22%), Positives = 42/92 (45%)
Frame = +1
Query: 523 EKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIER 702
E+ E E R K+ + +E+ +Q K ED++ K L+KM+++
Sbjct: 927 ERMERKRREEEERAKEQMR-IEEIEQEKSKQLQLQQKEEEDRLRKKIMKEQRELEKMLQQ 985
Query: 703 LRET*GTSSQGPRR*PGEVQSFESAIQEKLQQ 798
+ Q ++ ++Q E A++E+LQ+
Sbjct: 986 KEKERQVERQKQKQLQEQLQEQEKALRERLQR 1017
>SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045)
Length = 191
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 150 RSAPKKPVGKPRTKQPKKVK 209
R PKK G+P TK+PKKVK
Sbjct: 107 RGRPKKADGEPATKKPKKVK 126
>SB_21989| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1805
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/72 (23%), Positives = 38/72 (52%)
Frame = +1
Query: 481 RHQGGSRRQVETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTA 660
++Q R T E EA +++L + EG+ +++++L++ +E++ +EDK
Sbjct: 445 QYQEDIERHQLTKERLHEA-VSDLLELTRGETEGLRESQISLDENWSELWALLEDKEEEL 503
Query: 661 ADKRDENLKKMI 696
+R + L M+
Sbjct: 504 LRRRGDLLVVML 515
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 517 HEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAAD-KRDENLKKM 693
+E +++A I + R +L +E RL+ E + A + K + M A + KR ENL KM
Sbjct: 328 YEYEQKAKIEKERDKLV-----IEVERLSDEMKKAGLPKEVLSLMNDAREEKRSENLSKM 382
Query: 694 IERLRET 714
++L ET
Sbjct: 383 EKKLSET 389
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 132 LPAAHRRSAPKKPVGKPRTKQPKKVK 209
LP + +++ +KP+GKP T++ KKV+
Sbjct: 6138 LPVSAKKAVEEKPLGKPITRKEKKVE 6163
>SB_39788| Best HMM Match : Ricin_B_lectin (HMM E-Value=6.4e-14)
Length = 784
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 496 SRRQVETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTT---AAD 666
SR +V H+E + IN+L + + L+ + +L Q E ++ DK++ +D
Sbjct: 536 SRSKVNGHKETVDKAINDLSEKFNESLQRMNNKISSLHQVLHEKRSSMADKISELRFTSD 595
Query: 667 KRDENLKKMIERLR-ET*GTSSQGPR 741
K + N L + G SQG R
Sbjct: 596 KSESNTSTPTNSLTFNSKGDISQGDR 621
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +1
Query: 472 LHRRHQGGSRRQVETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIED-- 645
L RR + + ++ EK+ E ++ L++ L ++KT+ L Q+ E+++A E+
Sbjct: 2856 LERRRETEAVKKEMVATEKKVKLFLEKQNLLEEKLLLLQKTKEELRQKETELHEAREEIT 2915
Query: 646 -KMTTAADKRDENLKKMIERLRE 711
M +D+ +KK+++ + E
Sbjct: 2916 VLMNRIESSKDKQIKKVMKAVCE 2938
>SB_24737| Best HMM Match : KID (HMM E-Value=0.096)
Length = 636
Score = 29.9 bits (64), Expect = 2.6
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +1
Query: 523 EKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTA--ADKRDENLKKMI 696
E RE I++L LKD + + TLEQ A++ + +E K A + R L+K +
Sbjct: 148 EDREKSIDKLEKELKDQEAKHNRQKNTLEQTVAKMKEVMERKGGDANKVNARVAELEKEL 207
Query: 697 ERLRET*GTSSQGPRR*PGEVQSFESAIQEKLQ 795
+ ++ + + EV + + A+Q++ Q
Sbjct: 208 KEKTKSAEKLVKASEKREKEVDALKRALQDQDQ 240
>SB_50413| Best HMM Match : GRP (HMM E-Value=0.15)
Length = 487
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/82 (20%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 472 LHRRHQGGSRRQVETHEEKREAYINELRSRLKDHLEGVEKT-RLTLEQQTAEVYKAIEDK 648
+ RH+ ++ + + E +NE L H+E +K R +Q E+ +++
Sbjct: 10 MEARHEAARAKEETERQAELERQMNERLQELHAHMEKSDKNMREAHRKQIQEISSKHKEE 69
Query: 649 MTTAADKRDENLKKMIERLRET 714
+ ++ ++LKK +L+ T
Sbjct: 70 LQQQLERFHQDLKKKDAKLKTT 91
>SB_16340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +1
Query: 523 EKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIER 702
EK E + RLKD + K LE+Q ++ D+M ++ +E LK + ER
Sbjct: 145 EKNITTAMEQQKRLKDSYDETVKRNQELEEQVLKM----ADEMQEERERFEEALKVVTER 200
Query: 703 LRET 714
L ET
Sbjct: 201 LVET 204
>SB_6334| Best HMM Match : zf-C2H2 (HMM E-Value=1.5e-26)
Length = 611
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 499 RRQVETHE-EKREAY-INELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKR 672
+R + TH EKR A I R DHL KT + + A+ K+ ++K T + D+R
Sbjct: 318 QRHLRTHTGEKRFACPICSKRFMRSDHLSKHVKTHNNITPKKADSEKSEDEKTTNSEDQR 377
Query: 673 DE 678
E
Sbjct: 378 SE 379
>SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 496 SRRQVETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVY-KAIEDKMTTAADKR 672
S+ Q E + + E + SR+ + + + +++ ++ K+ AA R
Sbjct: 974 SKHQQELAQIRAEFAVRHSNSRVAELQSKMASLEIVIQKLRDKLAAKSGSSDALAAAKAR 1033
Query: 673 DENLKKMIERLRE 711
+ENLK+ IERL E
Sbjct: 1034 EENLKQQIERLNE 1046
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/94 (17%), Positives = 44/94 (46%)
Frame = +1
Query: 508 VETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLK 687
V+ +E+ EAYI L+ + LE +++ +++ + +ED + ++ + +
Sbjct: 257 VKALKEENEAYIEALKEQYSHDLEDLKQELSAKDEEILQKEAQMEDDLLLMRNEYESQVS 316
Query: 688 KMIERLRET*GTSSQGPRR*PGEVQSFESAIQEK 789
+ + T + + + E+Q +++ + EK
Sbjct: 317 ALRAEIERTKESGNAALKDAMEELQKYKAEVTEK 350
>SB_35915| Best HMM Match : DUF593 (HMM E-Value=0.12)
Length = 371
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/72 (23%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +1
Query: 502 RQVETHEEKREAYINEL---RSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKR 672
+Q+E E++ ++E+ R+ + DH+ +E R+TL+++ + D++ +
Sbjct: 280 QQLEEVSEQKNNLLHEMGVVRTEIADHVTILEDLRITLQERNGTIEGLKADRL-----RL 334
Query: 673 DENLKKMIERLR 708
+E L+ + +RLR
Sbjct: 335 EEELRALSDRLR 346
>SB_28574| Best HMM Match : KE2 (HMM E-Value=1.2)
Length = 210
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Frame = +1
Query: 472 LHRRHQGGSRRQVETH---EEKREAYINELRSRLKDHLEGVEKTRLTLEQ--QTAEVYKA 636
L HQ R+Q+++ +E+++ I L ++K E R+ L + Q A YK
Sbjct: 120 LSSEHQEVHRQQMQSFNSLKEQKKMEIINLEEQIKTFKEQAASLRVRLSEVEQDAAYYKG 179
Query: 637 IEDKMTTAADKRDENLKKMIERLRE 711
+ +K ++ + + +RLRE
Sbjct: 180 LHNKGLLDIQRQQTTIISLNQRLRE 204
>SB_25602| Best HMM Match : Endomucin (HMM E-Value=1.1)
Length = 393
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 487 QGGSRRQVETHEEKR-EAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAA 663
+G + H+ + E I LRS + + V K +L + +K I++K+T+AA
Sbjct: 180 KGNKMEEQVVHDARECECKIEMLRSEVSASINDVAKKISSLTSKVTSEFKLIKNKLTSAA 239
Query: 664 D 666
+
Sbjct: 240 E 240
>SB_18775| Best HMM Match : DUF1409 (HMM E-Value=0.78)
Length = 356
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 197 EEGQIHHHRNPLPRDVEGRLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAAEER 376
E+ QI +P D + ++++ + +P AD K P EEI EKLK +E+
Sbjct: 165 EQSQIQLKTINIPLDGINKSPAQLMIGRRLKTSLPATADLL-KPPGQEEITEKLKKIKEK 223
Query: 377 RR 382
++
Sbjct: 224 QK 225
>SB_14736| Best HMM Match : Exonuc_VII_S (HMM E-Value=1.2)
Length = 206
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/100 (23%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Frame = +1
Query: 499 RRQVETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRD- 675
R+ E E+++ + L+ L D + + L + + E+ + ++D+ + ++D
Sbjct: 24 RQDFEKAFEEKDTTVQNLKKILDDSRKTNYELGRELSKNSTELQR-VKDEFDSIIHEKDS 82
Query: 676 --ENLKKMIERLRET*GTSSQGPRR*PGEVQS-FESAIQE 786
+NL+ IE +R+ G + GEVQ+ ++S I+E
Sbjct: 83 VVDNLRIRIEEMRKERGEMEDRSKAVIGEVQTRYDSKIRE 122
>SB_14482| Best HMM Match : Cornifin (HMM E-Value=3.7)
Length = 301
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = +3
Query: 621 GSVQGHRR*--DDHSCRQA*REPQEDDRASARNMRNKFARSAPVTRRSSELRERHPGEAS 794
G QG R DD ++ +EP + R AR A VT HPG
Sbjct: 2 GKPQGSTRAQPDDQLAQELAQEPGKPAREPARTPVAALPAPARVTSPEPPATRPHPGRVE 61
Query: 795 AGRR 806
AGRR
Sbjct: 62 AGRR 65
>SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046)
Length = 797
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 209 IHHHRNPLPRDVEGRLAYEVILAEPVGVPVPRRADSPEK 325
+H RNPLP R+ + + P PR DSP K
Sbjct: 357 LHSPRNPLPAYFTPRVLHSPPRTSLLAYPTPRVLDSPRK 395
>SB_41994| Best HMM Match : F-box (HMM E-Value=1.4e-06)
Length = 1020
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Frame = +1
Query: 472 LHRRHQGGSRRQVETH---EEKREAYINELRSRLKDHLEGVEKTRLTLEQ--QTAEVYKA 636
L HQ R+Q+++ +E+++ I L ++K E R+ L + Q A YK
Sbjct: 20 LSSEHQEVHRQQMQSFNSLKEQKKMEIINLEEQIKTFKEQAASLRVRLSEVEQDAAYYKG 79
Query: 637 IEDKMTTAADKRDENLKKMIERLRE 711
+ +K ++ + + +RLRE
Sbjct: 80 LHNKGLLDIQRQQTTIISLNQRLRE 104
>SB_16617| Best HMM Match : Vicilin_N (HMM E-Value=5.5)
Length = 547
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 663 RQA*REPQEDDRASARNMRNKFARSAPVTRRSSELRERHPGEASAGRRPTS 815
RQA R+PQ+ AS + + + R A ++S+L+++ A R TS
Sbjct: 237 RQASRKPQDKQAASPKTSKPQAPRQASRKTKTSKLQDQDKQAARQASRKTS 287
>SB_11461| Best HMM Match : NHL (HMM E-Value=0)
Length = 819
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +1
Query: 664 DKRDENLKKMIERLRET*GTSSQGPRR*PGEVQSFESAIQ---EKLQQAAD 807
DK+ E++ +MIERL +S G E + +E IQ E+L Q D
Sbjct: 108 DKKRESILRMIERLEVEISSSEDGETELTNETKQYEVHIQSNNERLVQKED 158
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 28.7 bits (61), Expect = 6.0
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Frame = +3
Query: 516 PRGKTRGLHQRAALPSQGSS*GC*EDQVDPGTADRGSVQGHR--R*DDHSCRQA*REPQE 689
PRG RG + P + S +D P DR + R R DD + R+ R+P+
Sbjct: 303 PRGDDRGQMKDDREPMKDDS-KLRKDNKGPRKDDREPRRDDREPRRDDRATRKDDRQPRG 361
Query: 690 DDRASARNMRNKFARSAPVTRRSSELRERHPGEASAGRRP 809
DDR ++ R + + + S+ R R P
Sbjct: 362 DDRGQMKDDREPMKDDSKLRKDESKPRRDDKEPRKDDREP 401
>SB_23841| Best HMM Match : LRR_1 (HMM E-Value=1e-09)
Length = 391
Score = 28.7 bits (61), Expect = 6.0
Identities = 25/85 (29%), Positives = 35/85 (41%)
Frame = +3
Query: 534 GLHQRAALPSQGSS*GC*EDQVDPGTADRGSVQGHRR*DDHSCRQA*REPQEDDRASARN 713
G +R + +Q S +DQV P GS G D + REP +DD + R
Sbjct: 8 GCIRRVPVTAQSSVSDTEDDQVVPPDELNGSSDGEY--DTDLEEEFKREPSQDDTSQGRG 65
Query: 714 MRNKFARSAPVTRRSSELRERHPGE 788
+ K S + S LR+ H E
Sbjct: 66 VYLKACSSLGLVPCSPFLRQLHKPE 90
>SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081)
Length = 524
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 523 EKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENL-KKMIE 699
+KR+ + + + + K+ +E EK R QQ E + ++ D+R+++L KK E
Sbjct: 143 KKRDEFWTQEQQKEKERIEE-EKNRAAAHQQELERKRKEREEKQQEVDEREDHLQKKRSE 201
Query: 700 RLRE 711
LR+
Sbjct: 202 SLRK 205
>SB_48415| Best HMM Match : Pox_A32 (HMM E-Value=0.014)
Length = 988
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 648 DDHSCRQA*REPQEDDRASARNMRNKFARSAPVTRRSSELRERHPGEASAGRR 806
D+ ++ +EP + R AR +A VT HPG AGRR
Sbjct: 788 DEQLAQELAQEPGKQRREPARTPVAALPAAARVTSPEPPATRPHPGRVEAGRR 840
>SB_12695| Best HMM Match : Linker_histone (HMM E-Value=1.6e-38)
Length = 184
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 135 PAAHRRSAPKKPVGKPRTKQPKK 203
PAA + +PKK K TK PKK
Sbjct: 118 PAAKKAKSPKKSAPKKATKSPKK 140
>SB_44228| Best HMM Match : LMP (HMM E-Value=0.11)
Length = 276
Score = 28.3 bits (60), Expect = 7.9
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Frame = +1
Query: 523 EKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRD---ENLKKM 693
E+++ + L+ L D + + L + + E+ + ++D+ + ++D +NL+
Sbjct: 7 EEKDTTVQNLKKILDDSRKTNYELERELSKNSTELQR-VKDEFDSIIHEKDSVVDNLRIR 65
Query: 694 IERLRET*GTSSQGPRR*PGEVQS-FESAIQE 786
IE +R+ G + GEVQ+ ++S I+E
Sbjct: 66 IEEMRKERGEMEDRSKAVIGEVQTRYDSKIRE 97
>SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7)
Length = 567
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 657 SCRQA*REPQEDDRASARNMRNKFARSAPVTRRSSELRE 773
SC++ +PQE D+ +AR ++ AR +R++ R+
Sbjct: 523 SCKKKTSKPQEKDKQAARKRPSQAARKRQASRKNKTSRK 561
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,179,619
Number of Sequences: 59808
Number of extensions: 476047
Number of successful extensions: 2078
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2068
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2275631710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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