Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0771
         (815 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    28   0.40 
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    26   1.6  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    25   2.8  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   3.7  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   4.9  
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          24   6.4  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       23   8.5  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   8.5  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   8.5  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 27.9 bits (59), Expect = 0.40
 Identities = 19/74 (25%), Positives = 39/74 (52%)
 Frame = +1

Query: 499 RRQVETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDE 678
           + Q+E + +K E+  NE   R +  ++ ++ +RL LE+Q     +  +D  T  + +R  
Sbjct: 424 KAQIEENYKKIESEKNEALKRQEKLIDHIKTSRLGLEEQKRIKAELSQDVGT--SKERIH 481

Query: 679 NLKKMIERLRET*G 720
            L+  ++ +RE  G
Sbjct: 482 ELQSELDNVREQLG 495


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
 Frame = -1

Query: 473 SYSSARCGC---GTPPRSWPS 420
           SYSS++CGC      P  WPS
Sbjct: 337 SYSSSQCGCPDIPPAPNMWPS 357


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 114 SCRAPVLPAAHRRSAPKKPVGKPRTKQPKKVK 209
           SCR+P    A RRS   +P   PR++   K K
Sbjct: 270 SCRSP---PARRRSRSTRPTSWPRSRPTSKPK 298


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 20/98 (20%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
 Frame = +1

Query: 523 EKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMT--TAADKRDENLKKMI 696
           E++   + E  ++L + + G+ +     +++     + +E +M    AA +RD ++   +
Sbjct: 128 EEQNCAMKEQNAKLLEQITGMCQLLQEEKEEAKRREEKLEAQMEKLAAAHQRDRDVLNSL 187

Query: 697 ERLRET*GTSSQGPRR*PGEVQSFESAIQEKLQQAADR 810
              +   G  S  PR+ P  +    SA  ++ QQ   R
Sbjct: 188 LAAKVGGGQPSASPRQPPTPLPRRSSAQPQQQQQQQQR 225


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 525 KTRGLHQRAA-LPSQGSS*GC*EDQVDPGTADRGSVQ 632
           +TR + +R   LP +G+  G       PGT DR S+Q
Sbjct: 2   ETRSMRKRTTRLPEEGAPTGA-----GPGTGDRASIQ 33


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 604 LEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLRE 711
           L+ +  +  K +E +  T  +  D+N KK IER  E
Sbjct: 36  LKGEVEKQSKKLEKRKETLGESLDKNHKKKIERDEE 71


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 224 FGGDEFDLLRLLSSWFTDRF 165
           F  +E DL RLL+S  TDRF
Sbjct: 248 FERNEADLKRLLASNTTDRF 267


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = +2

Query: 326 TPSVEEIQEKLKAAEERR 379
           TP++EE++ + + AE+R+
Sbjct: 298 TPAIEELENECRIAEQRQ 315


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -1

Query: 203 LLRLLSSWFTDRFL 162
           LLR+L S+FTDR L
Sbjct: 615 LLRILQSYFTDREL 628


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 742,928
Number of Sequences: 2352
Number of extensions: 14890
Number of successful extensions: 52
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)