Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0771
(815 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g19835.1 68414.m02487 expressed protein contains Pfam PF05911... 33 0.30
At2g07190.1 68415.m00824 hypothetical protein 31 0.69
At3g53350.3 68416.m05888 myosin heavy chain-related low similari... 31 1.2
At3g53350.2 68416.m05887 myosin heavy chain-related low similari... 31 1.2
At3g53350.1 68416.m05886 myosin heavy chain-related low similari... 31 1.2
At5g10250.1 68418.m01190 phototropic-responsive protein, putativ... 29 2.8
At3g24600.1 68416.m03090 hypothetical protein 29 2.8
At3g18480.1 68416.m02348 CCAAT displacement protein-related / CD... 29 2.8
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 29 4.9
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 29 4.9
At1g60770.1 68414.m06841 pentatricopeptide (PPR) repeat-containi... 29 4.9
At4g24540.1 68417.m03517 MADS-box family protein 28 6.4
At1g69480.1 68414.m07983 EXS family protein / ERD1/XPR1/SYG1 fam... 28 6.4
At1g52410.2 68414.m05915 caldesmon-related weak similarity to Ca... 28 6.4
At1g11480.1 68414.m01319 eukaryotic translation initiation facto... 28 6.4
At4g36470.1 68417.m05179 S-adenosyl-L-methionine:carboxyl methyl... 28 8.5
At4g09950.1 68417.m01628 avirulence-responsive family protein / ... 28 8.5
At3g61690.1 68416.m06913 expressed protein 28 8.5
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 28 8.5
At1g47900.1 68414.m05334 expressed protein 28 8.5
>At1g19835.1 68414.m02487 expressed protein contains Pfam PF05911:
Plant protein of unknown function (DUF869)
Length = 982
Score = 32.7 bits (71), Expect = 0.30
Identities = 25/78 (32%), Positives = 40/78 (51%)
Frame = +1
Query: 460 ADE*LHRRHQGGSRRQVETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAI 639
A E L ++H + V T EK EA S LK HLE + +LT+E + A + A+
Sbjct: 81 AKEVLVKQHSKVAEEAV-TGWEKAEAEA----SALKTHLETITLAKLTVEDRAAHLDGAL 135
Query: 640 EDKMTTAADKRDENLKKM 693
++ M ++EN +K+
Sbjct: 136 KECMRQIRSLKEENEQKL 153
>At2g07190.1 68415.m00824 hypothetical protein
Length = 452
Score = 31.5 bits (68), Expect = 0.69
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 511 ETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKR-DENLK 687
E +EE + +N + + DH K +L ++ TA + A+ DKM + D + +
Sbjct: 267 EGNEENHVSGMNRSKKKQSDHGAETRKKKLLCQRATATTHGALNDKMNSFLKALIDSSFE 326
Query: 688 KMIERLR 708
K +RL+
Sbjct: 327 KFEKRLQ 333
>At3g53350.3 68416.m05888 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 394
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 508 VETHEEKREAYINELRSRLKDHLEGVEK---TRLTLEQQTAEVYKAIEDKMTTAADKRDE 678
V++ +REA + E +R KD +EG+ K ++ ++ T ++ K D M D+
Sbjct: 259 VKSRYSQREAELTEELNRTKDEIEGLRKELMEKVKEDESTGDLKKLESDLMEVRGSLMDK 318
Query: 679 NLKKMIER 702
++ I R
Sbjct: 319 EMELQILR 326
>At3g53350.2 68416.m05887 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 394
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 508 VETHEEKREAYINELRSRLKDHLEGVEK---TRLTLEQQTAEVYKAIEDKMTTAADKRDE 678
V++ +REA + E +R KD +EG+ K ++ ++ T ++ K D M D+
Sbjct: 259 VKSRYSQREAELTEELNRTKDEIEGLRKELMEKVKEDESTGDLKKLESDLMEVRGSLMDK 318
Query: 679 NLKKMIER 702
++ I R
Sbjct: 319 EMELQILR 326
>At3g53350.1 68416.m05886 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 396
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 508 VETHEEKREAYINELRSRLKDHLEGVEK---TRLTLEQQTAEVYKAIEDKMTTAADKRDE 678
V++ +REA + E +R KD +EG+ K ++ ++ T ++ K D M D+
Sbjct: 261 VKSRYSQREAELTEELNRTKDEIEGLRKELMEKVKEDESTGDLKKLESDLMEVRGSLMDK 320
Query: 679 NLKKMIER 702
++ I R
Sbjct: 321 EMELQILR 328
>At5g10250.1 68418.m01190 phototropic-responsive protein, putative
similar to root phototropism RPT2 [Arabidopsis thaliana]
gi|6959488|gb|AAF33112, a signal transducer of
phototropic response PMID:10662859
Length = 607
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = +1
Query: 520 EEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV---YKAIEDKMTTAAD--KRDENL 684
E+KR + NE+ LK+ LE V+K L+ E+ Y+ + K ++ + R + +
Sbjct: 512 EDKRMSRDNEIIKTLKEELENVKKKMSELQSDYNELQQEYERLSSKQKSSHNWGLRWQKV 571
Query: 685 KKMIERLRET*GTSSQGPRR 744
KK + RE T + RR
Sbjct: 572 KKSFQTKREDEETRERTRRR 591
>At3g24600.1 68416.m03090 hypothetical protein
Length = 506
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3
Query: 291 TPTGSASITSYANRPSTSLGSGFRW 217
TPT S S S A+R S G GFRW
Sbjct: 47 TPTESPSHPSIASRVSNGGGGGFRW 71
>At3g18480.1 68416.m02348 CCAAT displacement protein-related /
CDP-related similar to CCAAT displacement protein (CDP)
(Cut-like 1) (Swiss-Prot:P39880) [Homo sapiens];
contains Pfam:PF00904 Involucrin repeat
Length = 689
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/69 (21%), Positives = 35/69 (50%)
Frame = +1
Query: 505 QVETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENL 684
+VE+ K + + E R+ HL+ + T LE++ ++ + +E+K+ + + NL
Sbjct: 139 EVESENRKMKVELEEFRTEAT-HLKNQQATIRRLEERNRQLEQQMEEKIKEVVEIKQRNL 197
Query: 685 KKMIERLRE 711
+ ++ E
Sbjct: 198 AEENQKTME 206
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 290 VPVPRRADSPEKTPSVEEIQEKLKAAEERRRSLE 391
V + +SP+ T + +I+E LK A ER SLE
Sbjct: 85 VAAVKGTESPQTTTRLSQIKEDLKKANERISSLE 118
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/103 (22%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Frame = +1
Query: 502 RQVETHEEKREAYINEL-RSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDE 678
R+V + +++R++ + R ++ D +G KTR L+ + + + +E+ ++D
Sbjct: 330 REVNSLKQERDSLKEDCERQKVSDKQKGETKTRNRLQFEGRDPWVLLEETREELDYEKDR 389
Query: 679 NLKKMIERLRET*GTSSQGPRR*PGEVQSFESAIQEKLQQAAD 807
N ++ L +T ++S+ VQ E ++EK ++ AD
Sbjct: 390 NFNLRLQ-LEKTQESNSELIL----AVQDLEEMLEEKSKEGAD 427
>At1g60770.1 68414.m06841 pentatricopeptide (PPR) repeat-containing
protein low similarity to DNA-binding protein [Triticum
aestivum] GI:6958202; contains Pfam profile PF01535: PPR
repeat
Length = 491
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = -3
Query: 750 WLPA-RTLRTCSSCFAQTLD-----HLLEVLVTLVGSCGHLIFDGLVHFRGLLFQGQPGL 589
WLP+ T+R S F Q D +LLE+L + G IF+ L+ + P +
Sbjct: 406 WLPSPETVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAM 465
Query: 588 LNTLKM 571
LKM
Sbjct: 466 RRRLKM 471
>At4g24540.1 68417.m03517 MADS-box family protein
Length = 220
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +1
Query: 523 EKREAYINELRSRLKDHLEGVEKTRLT-----LEQQTAEVYKAIEDKMTTAADKRDENLK 687
EKR + + + RL+D LE +E+ +LT LE ++ + D T D D +LK
Sbjct: 154 EKRGSELVDENKRLRDKLETLERAKLTTLKEALETESVTTNVSSYDSGTPLEDDSDTSLK 213
>At1g69480.1 68414.m07983 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 777
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 555 AQLVDVGLAFFLVGLHLASRASLVATMKLFVC 460
A L +V L F +G HL S+ + + +LF+C
Sbjct: 535 APLYEVTLPDFFLGDHLTSQIQAIRSFELFIC 566
>At1g52410.2 68414.m05915 caldesmon-related weak similarity to
Caldesmon (CDM) (Swiss-Prot:P12957) [Gallus gallus]
Length = 759
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/101 (19%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = +1
Query: 511 ETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA--EVYKAIEDKMTTAADKRDENL 684
E H KR++ + + + +EG+E +++ + E A M ++ E
Sbjct: 213 EEHSAKRKSMLEAIEREFEAAMEGIEALKVSDSTGSGDDEEQSAKRLSMLEEIEREFEAA 272
Query: 685 KKMIERLRET*GTSSQGPRR*PGEVQSFESAIQEKLQQAAD 807
K +E+LR + T+ + QS I+ + + A +
Sbjct: 273 SKGLEQLRASDSTADNNEEEHAAKGQSLLEEIEREFEAATE 313
>At1g11480.1 68414.m01319 eukaryotic translation initiation
factor-related contains weak similarity to
Swiss-Prot:P23588 eukaryotic translation initiation
factor 4B (eIF-4B) [Homo sapiens]
Length = 578
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 156 APKKPVGKPRTKQPKKVKFITTEIRCQEMSKGGWRTR*YSPSRWAY 293
A +P P TKQP + T ++S GGW+++ PS+ +
Sbjct: 165 ANNEPGQSPWTKQPAVSNLVHTSA-LDQVSSGGWQSKLLVPSQMGF 209
>At4g36470.1 68417.m05179 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to SAM:jasmonic
acid carboxyl methyltransferase (JMT)[GI:13676829] and
to SAM:salicylic acid carboxyl methyltransferase
(SAMT)[GI:6002712][Clarkia breweri]
Length = 371
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 505 QVETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAAD 666
Q ET EEK ++Y + D +EG + E + E+ + +DK T D
Sbjct: 257 QGETEEEKLDSYDMHFYAPSADEIEGEVDKEGSFELERLEMLEVKKDKGNTEGD 310
>At4g09950.1 68417.m01628 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 [Arabidopsis thaliana]; contains
Pfam PF04548: AIG1 family;
Length = 336
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 541 INELRSRL-KDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIE 699
I++++ L K H E +E + + Q E + +++++ A +R+E KKM E
Sbjct: 246 ISQMKKELEKSHNEMLEGIKEKISNQLKESLEDVKEQLAKAQAEREETEKKMNE 299
>At3g61690.1 68416.m06913 expressed protein
Length = 1303
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 603 PGTADRGSVQGHRR*DDHSCRQA*REPQEDDRASARNMRNK-FARSAPVTRRSSELRERH 779
P + R GH R D HS R+ R S RN N+ A + P++R+ + +RH
Sbjct: 1120 PTSGMRRGNYGHDRTDHHSDREGNWNAGSKTRGSGRNHNNRNQADNKPISRQ--DRSDRH 1177
Query: 780 PGEA 791
G +
Sbjct: 1178 WGSS 1181
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Frame = +1
Query: 547 ELRSRLKDHLEGV-------EKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERL 705
+LR R+KD LEGV +L+++ E+YK +E T+ + +E K ++
Sbjct: 515 DLRRRVKDELEGVTHELKESSVKNQSLQKELVEIYKKVE----TSNKELEEEKKTVLSLN 570
Query: 706 RET*GTSSQ 732
+E G Q
Sbjct: 571 KEVKGMEKQ 579
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 27.9 bits (59), Expect = 8.5
Identities = 24/88 (27%), Positives = 39/88 (44%)
Frame = +1
Query: 502 RQVETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDEN 681
+++E E++ I S K HLEGV+K LE + + + K+ A
Sbjct: 293 KELEIRNEEKNMCIRSAESANKQHLEGVKKI-AKLEAECQRLRSLVRKKLPGPAAL--AQ 349
Query: 682 LKKMIERLRET*GTSSQGPRR*PGEVQS 765
+K +E L G + Q +R P +V S
Sbjct: 350 MKLEVENLGRDSGDARQ--KRSPVKVSS 375
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,871,422
Number of Sequences: 28952
Number of extensions: 316417
Number of successful extensions: 1243
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1233
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1863090400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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