Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0770
         (814 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    25   0.63 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   0.63 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    25   1.1  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    23   2.5  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   3.4  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   7.8  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   7.8  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 0.63
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 19  RTVPVGAWAGVNDGSALVKNEQRQRHARHR 108
           + VP   W GV  GSA    E+RQ +  H+
Sbjct: 157 KRVPPTNWVGVFGGSAWSWREERQAYYLHQ 186


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 0.63
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 19  RTVPVGAWAGVNDGSALVKNEQRQRHARHR 108
           + VP   W GV  GSA    E+RQ +  H+
Sbjct: 157 KRVPPTNWVGVFGGSAWSWREERQAYYLHQ 186


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 215 RNDGIRHLWRALQHHGAACPWTSLRRSDQTQGTCPG 108
           RN G+ H  +  QH+GAA       +S Q Q    G
Sbjct: 14  RNGGVEHPHQHQQHYGAAVQVPQQTQSVQQQSQQAG 49


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 654 GVVVMGYSPFG 686
           G+++M YSPFG
Sbjct: 280 GIIIMWYSPFG 290


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +3

Query: 606 HLQNVQKEMVEFCQSEGVVVMGYSPFGSLVARHGSTVEGPKIDDPV 743
           HL+N+ K ++EF  +   VV    P    + + GS  E PK  +P+
Sbjct: 4   HLKNIMKPLMEFSATLDTVV----PNSGELFKAGS-AEQPKEQEPL 44


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 28  PVGAWAGVNDGSALVKNEQRQRHARHR 108
           P   W  V  GSA   NE+R+++  H+
Sbjct: 160 PPNNWLSVFWGSAWQWNEERKQYYLHQ 186


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +3

Query: 633 VEFCQSEGVVVMGYSPFGSLVARHGSTVEGPKIDD 737
           ++FC + G+V     P   L++++G     PK+ D
Sbjct: 168 LQFCHNAGIVHADVKPKNILMSKNGQ----PKLTD 198


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,691
Number of Sequences: 438
Number of extensions: 5351
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)