Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0769
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.1  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   3.6  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   4.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.8  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = +2

Query: 119 PAPATNPDPEPSXA*RP*LKQTMLXPCVNSVSESQDVTRT 238
           P P   P+P+P+        Q    P  +S ++    T+T
Sbjct: 393 PEPVPTPEPQPTQTTESEPTQASEQPTESSTTQKPQTTKT 432


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 590 RKILNCPKGENRDNQRILPSPALFSLSAKTSGTFT 486
           +KI N       D    LP P L++ SA T  +FT
Sbjct: 56  KKIYNIQNNFEYDTAS-LPLPGLYTKSANTIRSFT 89


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 77  GGTNTTRRLRGDRQPAPATNPD 142
           GG N T  L G  +PA  T PD
Sbjct: 127 GGANLTNSLTGPVRPAACT-PD 147


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -3

Query: 321 LSNSFSCSSFXTVLGY 274
           L NSFSCS     LGY
Sbjct: 240 LVNSFSCSCPSGTLGY 255


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +2

Query: 44   PTSTVAPPCGAGGTNTTRRLRGDRQP 121
            P    A P  +  + T R   GDR+P
Sbjct: 930  PCRNSASPASSDRSGTPRSTNGDRKP 955


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,508
Number of Sequences: 336
Number of extensions: 2139
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)