Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0768
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.64 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    24   1.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    24   1.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.0  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   2.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.4  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   4.5  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   4.5  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   4.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.5  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +2

Query: 269 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 364
           +VT+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +2

Query: 506 DPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYLHEDSSPSAATRSLPTAE 664
           DP  +SP   P+T +     P+ V   +  +   +    SS S+  +  PT E
Sbjct: 446 DPNYISPEVFPNTNNAIMTPPASVQTESSDNYNSFHQFYSSESSQNQVAPTGE 498


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +2

Query: 506 DPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYLHEDSSPSAATRSLPTAE 664
           DP  +SP   P+T +     P+ V   +  +   +    SS S+  +  PT E
Sbjct: 394 DPNYISPEVFPNTNNAIMTPPASVQTESSDNYNSFHQFYSSESSQNQVAPTGE 446


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 557 SPTPSCVWDLAGRDLTD 607
           +PTP   W+L GR L++
Sbjct: 440 NPTPEITWELYGRRLSN 456


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 582 SQTQDGVGECVSLVDGHGVGDTVAGSSTIPVVRPDAYS 469
           +Q+ D +G C S+ D H   +  A S    +  P A S
Sbjct: 651 NQSDDNLGSCGSMGDAHTPPEDDAESLNQSISSPGALS 688


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 582 SQTQDGVGECVSLVDGHGVGDTVAGSSTIPVVRPDAYS 469
           +Q+ D +G C S+ D H   +  A S    +  P A S
Sbjct: 543 NQSDDNLGSCGSMGDAHTPPEDDAESLNQSISSPGALS 580


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 141 GTRREEHHLLRNRP 100
           G R+  HHL++N+P
Sbjct: 82  GVRKVLHHLIKNKP 95


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 385 GQQREDDPDHVRNIQHARHVRRHPSRA 465
           GQ    DP+ V   +   H+  HP +A
Sbjct: 903 GQYTTKDPNEVTCDEEEGHISYHPDKA 929


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
 Frame = +2

Query: 554 HSPTPSCVWDLAGRD--LTDYLHEDSSPSAATRSLPTAEREI 673
           H+P P C+ +L G    L D      S      SL  ++ EI
Sbjct: 352 HTPEPDCIHELLGHMPLLADPSFAQFSQEIGLASLGASDAEI 393


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 141 GTRREEHHLLRNRP 100
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 141 GTRREEHHLLRNRP 100
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 307 MPNLLHVIPVSDDSVFDGYLRVRIPLLL 224
           +P++  +IP  DD+  D      I +LL
Sbjct: 355 LPDISEIIPTGDDTTMDSNDMTAIYVLL 382


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 307 MPNLLHVIPVSDDSVFDGYLRVRIPLLL 224
           +P++  +IP  DD+  D      I +LL
Sbjct: 355 LPDISEIIPTGDDTTMDSNDMTAIYVLL 382


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 307 MPNLLHVIPVSDDSVFDGYLRVRIPLLL 224
           +P++  +IP  DD+  D      I +LL
Sbjct: 355 LPDISEIIPTGDDTTMDSNDMTAIYVLL 382


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 307 MPNLLHVIPVSDDSVFDGYLRVRIPLLL 224
           +P++  +IP  DD+  D      I +LL
Sbjct: 355 LPDISEIIPTGDDTTMDSNDMTAIYVLL 382


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,044
Number of Sequences: 336
Number of extensions: 4726
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)