Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0768
(746 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 215 4e-56
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 215 4e-56
SB_56| Best HMM Match : Actin (HMM E-Value=0) 215 4e-56
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 215 4e-56
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 9e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 3e-35
SB_54| Best HMM Match : Actin (HMM E-Value=0) 128 4e-30
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 2e-27
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 105 5e-23
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 93 3e-19
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 81 7e-16
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 57 2e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 43 2e-04
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_58796| Best HMM Match : TIG (HMM E-Value=6.3e-22) 32 0.57
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.75
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.75
SB_41601| Best HMM Match : zf-C2H2 (HMM E-Value=0.0019) 31 1.3
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 31 1.3
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 30 1.7
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.7
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 1.7
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 30 2.3
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 30 2.3
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 30 2.3
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 30 2.3
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 29 3.0
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 3.0
SB_19798| Best HMM Match : Calx-beta (HMM E-Value=6.3e-12) 29 4.0
SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16) 29 4.0
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 5.3
SB_33735| Best HMM Match : Aminotran_1_2 (HMM E-Value=0.13) 29 5.3
SB_33494| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_29911| Best HMM Match : 7tm_1 (HMM E-Value=0.0026) 29 5.3
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_24425| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_8961| Best HMM Match : NUDE_C (HMM E-Value=5.6) 29 5.3
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 29 5.3
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 5.3
SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_46180| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_34780| Best HMM Match : Pox_A32 (HMM E-Value=0.018) 28 7.0
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 28 7.0
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 215 bits (524), Expect = 4e-56
Identities = 109/147 (74%), Positives = 115/147 (78%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130
Query: 434 PAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYL 613
PAMYVAIQAVLSLYASGRTTGIV+D P P DLAGRDLTDYL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYL 190
Query: 614 HEDSSPSAATRSLPTAEREIVRDIKEK 694
+ + + + TAEREIVRDIKEK
Sbjct: 191 MKILTERGYSFT-TTAEREIVRDIKEK 216
Score = 147 bits (356), Expect = 1e-35
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +3
Query: 45 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYP 257
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
Score = 64.9 bits (151), Expect = 7e-11
Identities = 37/73 (50%), Positives = 40/73 (54%)
Frame = +1
Query: 511 GDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXXXXXXTERGYSFTTNRRAGNRS*HQG 690
GDGV+HTVPIYEGYALPHAI TERGYSFTT +
Sbjct: 157 GDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKIL-TERGYSFTTTAEREIVRDIKE 215
Query: 691 EAVYVALDFEQXM 729
+ YVALDFEQ M
Sbjct: 216 KLCYVALDFEQEM 228
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 215 bits (524), Expect = 4e-56
Identities = 109/147 (74%), Positives = 115/147 (78%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 70 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 129
Query: 434 PAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYL 613
PAMYVAIQAVLSLYASGRTTGIV+D P P DLAGRDLTDYL
Sbjct: 130 PAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 189
Query: 614 HEDSSPSAATRSLPTAEREIVRDIKEK 694
+ + + + TAEREIVRDIKEK
Sbjct: 190 MKILTERGYSFT-TTAEREIVRDIKEK 215
Score = 144 bits (349), Expect = 7e-35
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +3
Query: 51 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 230
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 231 RGILTLKYP 257
RGILTLKYP
Sbjct: 62 RGILTLKYP 70
Score = 65.3 bits (152), Expect = 5e-11
Identities = 37/73 (50%), Positives = 40/73 (54%)
Frame = +1
Query: 511 GDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXXXXXXTERGYSFTTNRRAGNRS*HQG 690
GDGV+HTVPIYEGYALPHAI TERGYSFTT +
Sbjct: 156 GDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TERGYSFTTTAEREIVRDIKE 214
Query: 691 EAVYVALDFEQXM 729
+ YVALDFEQ M
Sbjct: 215 KLAYVALDFEQEM 227
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 215 bits (524), Expect = 4e-56
Identities = 109/147 (74%), Positives = 115/147 (78%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 70 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 129
Query: 434 PAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYL 613
PAMYVAIQAVLSLYASGRTTGIV+D P P DLAGRDLTDYL
Sbjct: 130 PAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 189
Query: 614 HEDSSPSAATRSLPTAEREIVRDIKEK 694
+ + + + TAEREIVRDIKEK
Sbjct: 190 MKILTERGYSFT-TTAEREIVRDIKEK 215
Score = 145 bits (352), Expect = 3e-35
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +3
Query: 51 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 230
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 231 RGILTLKYP 257
RGILTLKYP
Sbjct: 62 RGILTLKYP 70
Score = 64.9 bits (151), Expect = 7e-11
Identities = 37/73 (50%), Positives = 40/73 (54%)
Frame = +1
Query: 511 GDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXXXXXXTERGYSFTTNRRAGNRS*HQG 690
GDGV+HTVPIYEGYALPHAI TERGYSFTT +
Sbjct: 156 GDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TERGYSFTTTAEREIVRDIKE 214
Query: 691 EAVYVALDFEQXM 729
+ YVALDFEQ M
Sbjct: 215 KLCYVALDFEQEM 227
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 215 bits (524), Expect = 4e-56
Identities = 109/147 (74%), Positives = 115/147 (78%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130
Query: 434 PAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYL 613
PAMYVAIQAVLSLYASGRTTGIV+D P P DLAGRDLTDYL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 190
Query: 614 HEDSSPSAATRSLPTAEREIVRDIKEK 694
+ + + + TAEREIVRDIKEK
Sbjct: 191 MKILTERGYSFT-TTAEREIVRDIKEK 216
Score = 151 bits (367), Expect = 4e-37
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = +3
Query: 45 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYP 257
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
Score = 64.9 bits (151), Expect = 7e-11
Identities = 37/73 (50%), Positives = 40/73 (54%)
Frame = +1
Query: 511 GDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXXXXXXTERGYSFTTNRRAGNRS*HQG 690
GDGV+HTVPIYEGYALPHAI TERGYSFTT +
Sbjct: 157 GDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TERGYSFTTTAEREIVRDIKE 215
Query: 691 EAVYVALDFEQXM 729
+ YVALDFEQ M
Sbjct: 216 KLCYVALDFEQEM 228
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 184 bits (447), Expect = 9e-47
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130
Query: 434 PAMYVAIQAVLSLYASGRTTGIVLD 508
PAMYVAIQAVLSLYASGRTTGIV+D
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVMD 155
Score = 147 bits (356), Expect = 1e-35
Identities = 66/71 (92%), Positives = 70/71 (98%)
Frame = +3
Query: 45 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 224
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 225 SKRGILTLKYP 257
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
Score = 31.5 bits (68), Expect(2) = 2e-04
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1
Query: 631 ERGYSFTTNRRAGNRS*HQGEAVYVALDFEQXM 729
ERGYSFTT + + YVALDFEQ M
Sbjct: 169 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 201
Score = 31.1 bits (67), Expect(2) = 2e-04
Identities = 14/17 (82%), Positives = 15/17 (88%), Gaps = 2/17 (11%)
Frame = +1
Query: 511 GDGVSHTVPIYE--GYA 555
GDGVSHTVPIYE GY+
Sbjct: 157 GDGVSHTVPIYEERGYS 173
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 656 TAEREIVRDIKEK 694
TAEREIVRDIKEK
Sbjct: 177 TAEREIVRDIKEK 189
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 145 bits (352), Expect = 3e-35
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +3
Query: 51 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 230
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 231 RGILTLKYP 257
RGILTLKYP
Sbjct: 62 RGILTLKYP 70
Score = 101 bits (242), Expect = 6e-22
Identities = 59/102 (57%), Positives = 67/102 (65%)
Frame = +2
Query: 389 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTP 568
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+D P P
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 569 SCVWDLAGRDLTDYLHEDSSPSAATRSLPTAEREIVRDIKEK 694
DLAGRDLTDYL + + + + TAEREIVRDIKEK
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFT-TTAEREIVRDIKEK 178
Score = 64.9 bits (151), Expect = 7e-11
Identities = 37/73 (50%), Positives = 40/73 (54%)
Frame = +1
Query: 511 GDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXXXXXXTERGYSFTTNRRAGNRS*HQG 690
GDGV+HTVPIYEGYALPHAI TERGYSFTT +
Sbjct: 119 GDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKIL-TERGYSFTTTAEREIVRDIKE 177
Query: 691 EAVYVALDFEQXM 729
+ YVALDFEQ M
Sbjct: 178 KLCYVALDFEQEM 190
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTF 316
PIEHGIVTNWDDMEKI TF
Sbjct: 70 PIEHGIVTNWDDMEKIMFETF 90
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 128 bits (310), Expect = 4e-30
Identities = 69/132 (52%), Positives = 86/132 (65%)
Frame = +2
Query: 296 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 475
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 476 ASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYLHEDSSPSAATRSLP 655
ASGRTTG V D P P + DLAGRDLT YL + +
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQ-S 2247
Query: 656 TAEREIVRDIKE 691
TAE++I+RD+KE
Sbjct: 2248 TAEQQIIRDLKE 2259
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 69 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 170
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 120 bits (288), Expect = 2e-27
Identities = 67/158 (42%), Positives = 93/158 (58%), Gaps = 2/158 (1%)
Frame = +2
Query: 227 QKRYP-DPQIPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREK 400
Q RY + P+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREK
Sbjct: 63 QLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREK 122
Query: 401 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVW 580
M ++MFE + +Y+AIQAVL+LYA G TG+V+D CP P +
Sbjct: 123 MIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRL 182
Query: 581 DLAGRDLTDYLHEDSSPSAATRSLPTAEREIVRDIKEK 694
D+AGRD+T YL + + TA+ E VR +KEK
Sbjct: 183 DIAGRDITKYLIKLMLLRGYAFN-HTADFETVRMMKEK 219
Score = 57.6 bits (133), Expect = 1e-08
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 236
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 237 ILTLKYP 257
+L + YP
Sbjct: 67 MLEVNYP 73
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 105 bits (251), Expect = 5e-23
Identities = 56/117 (47%), Positives = 73/117 (62%)
Frame = +2
Query: 344 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDPATVS 523
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 524 PTPCPSTRDTHSPTPSCVWDLAGRDLTDYLHEDSSPSAATRSLPTAEREIVRDIKEK 694
P P D+AGRD++ YL ++E EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFH-SSSELEIVRTIKEE 241
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 92.7 bits (220), Expect = 3e-19
Identities = 54/95 (56%), Positives = 61/95 (64%)
Frame = +2
Query: 410 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLA 589
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V D P P DLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 590 GRDLTDYLHEDSSPSAATRSLPTAEREIVRDIKEK 694
GRDLTDYL + + + + TAEREIVRDIKEK
Sbjct: 61 GRDLTDYLMKLMTERGYSFT-TTAEREIVRDIKEK 94
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 81.4 bits (192), Expect = 7e-16
Identities = 33/95 (34%), Positives = 59/95 (62%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 433
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 434 PAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCP 538
PA ++ +VL+ +A+GR+ G+V+D + P
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVP 97
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 54 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 170
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +3
Query: 39 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 209
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 210 GDEAQSKRGILTL 248
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
Score = 31.5 bits (68), Expect = 0.75
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 455 QAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSC-VWDLAGRDLTDYLHEDSSP 631
Q LSLYASG T G+ L + S T + H+ + ++ G LT+ L +
Sbjct: 767 QLSLSLYASGMTLGVCLS-SGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRD 825
Query: 632 SAATRSLPTAEREIVRDIKEK 694
++ +IV DIKEK
Sbjct: 826 QRGHNFTSSSGWQIVNDIKEK 846
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 361
PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 301 PIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 167 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 51
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 299 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 478
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 479 SGRTTGIV 502
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_58796| Best HMM Match : TIG (HMM E-Value=6.3e-22)
Length = 1709
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 429 TRPPCTSPSKPCSRCTRPVVPPVSCWTRRRCLPHRAHLRGIRTP 560
TR T +PCS TR V+P + W R LP R + ++ P
Sbjct: 1531 TRLLATKDFQPCSAKTRRVIPSFTVWRVRGRLPLRFWINIVKNP 1574
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.75
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 142 GNTARGASSPAKPALHIPEPLSTT 71
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.75
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 386 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 502
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.75
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 142 GNTARGASSPAKPALHIPEPLSTT 71
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_41601| Best HMM Match : zf-C2H2 (HMM E-Value=0.0019)
Length = 1008
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = +2
Query: 491 TGIVLDPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYLHEDSSPSAATRSLPTA 661
T I P P TH+P+P + L R L+ + ED SP T L A
Sbjct: 887 TTISHPPQAAQAPPTTPAPQTHNPSPFPAYHLLARMLSVHQEEDESPLTKTIRLTAA 943
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 251 IPIEHGIVTNWDDMEKIWHHTFYNE 325
+P + G + NWD ++IW +TF E
Sbjct: 291 LPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/66 (25%), Positives = 36/66 (54%)
Frame = +3
Query: 57 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 236
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 237 ILTLKY 254
L Y
Sbjct: 284 YSALFY 289
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 142 GNTARGASSPAKPALHIPEPLSTT 71
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_35006| Best HMM Match : PT (HMM E-Value=3.4)
Length = 325
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -2
Query: 262 FDGYLRVRIPLLLCASSPT*ESFCPIPTITP*WRGLPT 149
+DG + +++ LLL +SSP S PI TP +GL T
Sbjct: 273 YDGVIDIKLNLLLLSSSPMFLSAVPIAPHTPTLQGLHT 310
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 370 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 462
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.7
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 450 PSKPCSRCTRPVVPP 494
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 224 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 90
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 216 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 224 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 90
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 411 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 254 PIEHGIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 397
P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 134 PFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = -1
Query: 230 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 66
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 65 GNFFVAHLELVK 30
G V L+ K
Sbjct: 521 GQVDVLLLDFQK 532
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 224 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 90
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 274 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 224 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 90
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 252 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 224 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 90
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 224 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 90
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 224 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 90
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 128 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 29.5 bits (63), Expect = 3.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 511 GDGVSHTVPIYEGYALPHAI 570
GDGV+H +P+ EGY + I
Sbjct: 69 GDGVTHVIPVAEGYVIGSCI 88
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -1
Query: 224 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 90
+C ++LSH + H M D +HG RS SCET L T
Sbjct: 176 ICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_19798| Best HMM Match : Calx-beta (HMM E-Value=6.3e-12)
Length = 185
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +2
Query: 404 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSP 562
T I F+ + P A A L L SG +G L ATV+P + D +SP
Sbjct: 26 TYIGFDLSDVPVPESAGTATLGLTRSGDVSGESLVTATVTPLTATAGTDYNSP 78
>SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16)
Length = 284
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 248 QIPIEHGIVTNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLN 379
++ +E G W+D+ + HTF +L + A E +P L+E PLN
Sbjct: 45 EVKLEKGKNQAWEDLRSVNAHTFDVKLFKEADESYP--LSEKPLN 87
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +2
Query: 323 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 502
E VAPE + E + P+ + T + E+ P V + +SL TT +
Sbjct: 641 ESTVAPET--TVAPETTVAPEITASRETTVAPESTVWPVSTVEPKTTISLPV---TTLVQ 695
Query: 503 LDPATVSPTPCPSTRD 550
L +V P+P P+T D
Sbjct: 696 LSTTSVGPSPTPTTTD 711
>SB_33735| Best HMM Match : Aminotran_1_2 (HMM E-Value=0.13)
Length = 383
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 539 MGTVWETPSPGPARYRWYDRTRTA 468
MG V + P PG Y YD+ RTA
Sbjct: 244 MGIVCQPPKPGDDSYALYDKERTA 267
>SB_33494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1097
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +1
Query: 349 PSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRA-LAVRVRSYHRYRAGPGDGVS 525
PSP P+P+ Q D+ D ++ ++ P +A L + S+H P S
Sbjct: 713 PSPETPRKPEPEVTQDRDESDEEPQVEFTPTEKKKPFKAKLNFSINSFHAQAERPTSAHS 772
Query: 526 -HTVPIYEGY 552
H+ EG+
Sbjct: 773 THSEDFEEGF 782
>SB_29911| Best HMM Match : 7tm_1 (HMM E-Value=0.0026)
Length = 197
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 519 TVAGSSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLL 388
T+ + + VV D Y + +ATY+ L VSN++ V+ +L
Sbjct: 20 TLGNAVVVVVVYKDPYKQLKKNLATYLIAGLAVSNLLLVVGEIL 63
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 374 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 502
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_24425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 506 DPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYLHEDSSPSAATRSL 652
DPA + +P S PTP+ +G L + +SSP R+L
Sbjct: 415 DPAPGASSPTTSQSSVSEPTPTSKPKSSGTSLLSFPSTNSSPKPVIRNL 463
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 422 TFNTPAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPS 571
T TP++ + QA S+ S T V V+P+ ST+ S TPS
Sbjct: 1840 THLTPSVASSTQAASSVILSAEVTTSVTSSTQVTPSVASSTQAATSVTPS 1889
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +2
Query: 362 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPS 541
T+ + ++ + T + T P++ + Q S+ +S + T V +P+ PS
Sbjct: 1870 TQVTPSVASSTQAATSVTPSTQGMPSVAPSTQMTPSVASSTQVTPSVASSTQAAPSVTPS 1929
Query: 542 TRDTHSPTPS 571
T T S TPS
Sbjct: 1930 TLMTPSVTPS 1939
>SB_8961| Best HMM Match : NUDE_C (HMM E-Value=5.6)
Length = 298
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 506 DPATVSPTPCPSTRDTHSPTPSCVWDLAGRDLTDYLHEDSSPSAATRSL 652
DPA + +P S PTP+ +G L + +SSP R+L
Sbjct: 79 DPAPGASSPTTSQSSVSEPTPTSKPKSSGTSLLSFPSTNSSPKPVIRNL 127
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +2
Query: 323 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 502
E VAPE + E + P+ + T + E+ P V + +SL TT +
Sbjct: 590 ESTVAPET--TVAPETTVAPEITASRETTVAPESTVWPVSTVEPKTTISLPV---TTLVQ 644
Query: 503 LDPATVSPTPCPSTRD 550
L +V P+P P+T D
Sbjct: 645 LSTTSVGPSPTPTTTD 660
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +2
Query: 323 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 502
E VAPE + E + P+ + T + E+ P V + +SL TT +
Sbjct: 2896 ESTVAPET--TVAPETTVAPEITASRETTVAPESTVWPVSTVEPKTTISLPV---TTLVQ 2950
Query: 503 LDPATVSPTPCPSTRD 550
L +V P+P P+T D
Sbjct: 2951 LSTTSVGPSPTPTTTD 2966
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 28.7 bits (61), Expect = 5.3
Identities = 36/123 (29%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Frame = +2
Query: 311 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA-VLSLYASGR 487
T E VAP + TE P+ T + ET P +A + V+
Sbjct: 205 TAAQETTVAPGT--TVATETTAAPETTTAPETTMALETTVAPEATMAPETTVVPDTTVEP 262
Query: 488 TTGIVLDPATVSPTP--CPSTRDTHSPTPSCVWDLAGRDLTDYLHEDSSPSAATRSLPTA 661
T L P V+ P P+T +S TPS +L TDY +SP A + S
Sbjct: 263 ETSTTLKPTDVTEKPEASPATPAEYSTTPSVQPELTEAPQTDY-PTTASP-ATSPSTVAQ 320
Query: 662 ERE 670
ERE
Sbjct: 321 ERE 323
>SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4482
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 331 CRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYR--A 504
C P TP PA+ P P + E + + + R + +R+ +V+++S + A
Sbjct: 2990 CEPADTPEPANQTEPGPVDKSGEAE-ESSHPSRPGRSFKYSHTRSKSVKIKSKNEANGVA 3048
Query: 505 GPGDGVSHTVPIY 543
P VPIY
Sbjct: 3049 HPSQSPVQVVPIY 3061
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 142 GNTARGASSPAKPALHIPEPLSTT 71
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 142 GNTARGASSPAKPALHIPEPLSTT 71
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_46180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 467 SLYASGRTTGIVLDPATVSPTPCPSTRDT 553
S+Y +G TGIV P T SP ++R T
Sbjct: 49 SIYVNGANTGIVGPPVTASPKSRCTSRQT 77
>SB_34780| Best HMM Match : Pox_A32 (HMM E-Value=0.018)
Length = 625
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 486 VPPVSCWTRRRCLPHR 533
+P V CWT RR LP R
Sbjct: 336 LPAVECWTARRILPER 351
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/84 (23%), Positives = 33/84 (39%)
Frame = +2
Query: 311 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 490
T E VAPE + E ++P+ T + ET TP VA + ++ +
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 491 TGIVLDPATVSPTPCPSTRDTHSP 562
+ TV+P + T +P
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAP 4263
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +2
Query: 449 AIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTP 568
AIQ V A RTTGI LD + T+ H+PTP
Sbjct: 209 AIQIVYDHQAKERTTGIELDGRRIR-VDYSVTKRAHTPTP 247
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 435 PPCTSPSKPCSRCTRPVVPPVSC 503
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,775,618
Number of Sequences: 59808
Number of extensions: 683720
Number of successful extensions: 2715
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 2285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2667
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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