BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0768 (746 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 26 0.33 AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 3.0 AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 23 4.0 AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 4.0 AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding prote... 21 9.3 AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding prote... 21 9.3 AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 21 9.3 >DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine receptor alpha1subunit protein. Length = 601 Score = 26.2 bits (55), Expect = 0.33 Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = +2 Query: 512 ATVSPT--PCPSTRDTHSPTPSCVWDLAGRDLTDYLHEDSSPSAATRSLPTAEREIVRDI 685 ATV T PC P P DL G Y+HED S PT E+ +VR+I Sbjct: 461 ATVGTTVAPCFEEPLPSLPLPGADDDLFGPASPAYVHEDVS--------PTFEKPLVREI 512 Query: 686 KE 691 ++ Sbjct: 513 EK 514 >AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor protein. Length = 1770 Score = 23.0 bits (47), Expect = 3.0 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = +2 Query: 326 LRVAPEEHPVLLTEAPLNPKANREKM 403 LR+ P H V+ T +NP + EK+ Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486 >AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase protein. Length = 510 Score = 22.6 bits (46), Expect = 4.0 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%) Frame = +2 Query: 554 HSPTPSCVWDLAGRD--LTDYLHEDSSPSAATRSLPTAEREI 673 H+P P C+ +L G L D S SL ++ EI Sbjct: 330 HTPEPDCIHELLGHMPLLADPSFAQFSQEIGLASLGASDEEI 371 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 22.6 bits (46), Expect = 4.0 Identities = 7/17 (41%), Positives = 12/17 (70%) Frame = +2 Query: 557 SPTPSCVWDLAGRDLTD 607 +PTP W+L G+ L++ Sbjct: 420 NPTPEITWELDGKRLSN 436 >AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding protein ASP4 protein. Length = 136 Score = 21.4 bits (43), Expect = 9.3 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 1/43 (2%) Frame = +2 Query: 473 YASGRTTGIV-LDPATVSPTPCPSTRDTHSPTPSCVWDLAGRD 598 + G T + L+ T TP T D H CV A D Sbjct: 65 FMDGNTLNVEKLESGTRELTPDDFTEDVHEIIEQCVSKAADED 107 >AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding protein ASP4 protein. Length = 136 Score = 21.4 bits (43), Expect = 9.3 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 1/43 (2%) Frame = +2 Query: 473 YASGRTTGIV-LDPATVSPTPCPSTRDTHSPTPSCVWDLAGRD 598 + G T + L+ T TP T D H CV A D Sbjct: 65 FMDGNTLNVEKLESGTRELTPDDFTEDVHEIIEQCVSKAADED 107 >AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C protein. Length = 149 Score = 21.4 bits (43), Expect = 9.3 Identities = 7/10 (70%), Positives = 8/10 (80%) Frame = +3 Query: 90 GMCKAGFAGD 119 GMCK G +GD Sbjct: 130 GMCKEGISGD 139 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 230,073 Number of Sequences: 438 Number of extensions: 5846 Number of successful extensions: 14 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 14 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 23388480 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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